RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 ZNF706Q9Y5V0 76 aaPredicted RBP7.46□□□□□ -1.22
PPP4R3A-206ENST00000554943 Q1T7F1 81 aa7.46□□□□□ -1.22
PPP4R3A-206ENST00000554943 C1orf64Q8NEQ6 169 aa7.45□□□□□ -1.22
PPP4R3A-206ENST00000554943 PKHD1P08F94 4074 aa7.45□□□□□ -1.22
PPP4R3A-206ENST00000554943 SPINK6Q6UWN8 80 aa7.45□□□□□ -1.22
PPP4R3A-206ENST00000554943 NDUFB1O75438 58 aa7.44□□□□□ -1.22
PPP4R3A-206ENST00000554943 CD164Q04900 197 aa7.43□□□□□ -1.22
PPP4R3A-206ENST00000554943 RETNLBQ9BQ08 111 aa7.43□□□□□ -1.22
PPP4R3A-206ENST00000554943 IGLV7-43P04211 117 aa7.41□□□□□ -1.22
PPP4R3A-206ENST00000554943 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.22
PPP4R3A-206ENST00000554943 A0A1B0GVX0 72 aa7.4□□□□□ -1.23
PPP4R3A-206ENST00000554943 SPTSSBQ8NFR3 76 aa7.39□□□□□ -1.23
PPP4R3A-206ENST00000554943 A8MUN3 132 aa7.39□□□□□ -1.23
PPP4R3A-206ENST00000554943 TP53AIP1Q9HCN2 124 aa7.39□□□□□ -1.23
PPP4R3A-206ENST00000554943 H0Y9P7 68 aa7.38□□□□□ -1.23
PPP4R3A-206ENST00000554943 IGLV7-46A0A075B6I9 117 aa7.37□□□□□ -1.23
PPP4R3A-206ENST00000554943 C1orf134Q5TEV5 83 aa7.37□□□□□ -1.23
PPP4R3A-206ENST00000554943 APOBP04114 4563 aaKnown RBP7.36□□□□□ -1.23
PPP4R3A-206ENST00000554943 A0A087X002 238 aa7.36□□□□□ -1.23
PPP4R3A-206ENST00000554943 NOTCH2NLQ7Z3S9 236 aa7.36□□□□□ -1.23
PPP4R3A-206ENST00000554943 MP68P56378 58 aa7.35□□□□□ -1.23
PPP4R3A-206ENST00000554943 KRTAP10-2P60368 255 aa7.35□□□□□ -1.23
PPP4R3A-206ENST00000554943 IGHV6-1A0A0B4J1U7 121 aa7.34□□□□□ -1.23
PPP4R3A-206ENST00000554943 PMAIP1Q13794 54 aa7.34□□□□□ -1.23
PPP4R3A-206ENST00000554943 KRTAP21-3Q3LHN1 58 aa7.32□□□□□ -1.24
PPP4R3A-206ENST00000554943 CIRBP-AS1Q8TBR5 109 aa7.32□□□□□ -1.24
PPP4R3A-206ENST00000554943 KRTAP1-4P0C5Y4 121 aa7.31□□□□□ -1.24
PPP4R3A-206ENST00000554943 KRTAP13-2Q52LG2 175 aa7.31□□□□□ -1.24
PPP4R3A-206ENST00000554943 SSBP3-AS1Q7Z2R9 100 aa7.31□□□□□ -1.24
PPP4R3A-206ENST00000554943 Q8N9P0 234 aaPredicted RBP7.3□□□□□ -1.24
PPP4R3A-206ENST00000554943 PRR15LQ9BU68 103 aa7.3□□□□□ -1.24
PPP4R3A-206ENST00000554943 CHKB-CPT1BH3BT56 60 aa7.29□□□□□ -1.24
PPP4R3A-206ENST00000554943 MRPL34Q9BQ48 92 aaKnown RBP7.29□□□□□ -1.24
PPP4R3A-206ENST00000554943 KRTAP16-1A8MUX0 517 aa7.28□□□□□ -1.24
PPP4R3A-206ENST00000554943 SPAG11AQ6PDA7 123 aa7.26□□□□□ -1.25
PPP4R3A-206ENST00000554943 KRTAP10-1P60331 282 aa7.26□□□□□ -1.25
PPP4R3A-206ENST00000554943 Q5W150 140 aa7.25□□□□□ -1.25
PPP4R3A-206ENST00000554943 DYNC1H1Q14204 4646 aaKnown RBP7.24□□□□□ -1.25
PPP4R3A-206ENST00000554943 C8orf87E5RJ46 101 aa7.22□□□□□ -1.25
PPP4R3A-206ENST00000554943 CDK2AP2O75956 126 aa7.22□□□□□ -1.25
PPP4R3A-206ENST00000554943 LOC101927531A0A1B0GV80 90 aa7.22□□□□□ -1.25
PPP4R3A-206ENST00000554943 A6NED7 52 aa7.21□□□□□ -1.26
PPP4R3A-206ENST00000554943 Q5VV11 94 aa7.2□□□□□ -1.26
PPP4R3A-206ENST00000554943 RYR2Q92736 4967 aa7.18□□□□□ -1.26
PPP4R3A-206ENST00000554943 COA5Q86WW8 74 aa7.17□□□□□ -1.26
PPP4R3A-206ENST00000554943 LY6G6CO95867 125 aa7.17□□□□□ -1.26
PPP4R3A-206ENST00000554943 KRTAP10-4P60372 401 aaPredicted RBP7.17□□□□□ -1.26
PPP4R3A-206ENST00000554943 PRR26Q8N8Z3 221 aa7.15□□□□□ -1.26
PPP4R3A-206ENST00000554943 HRES1P13985 223 aa7.15□□□□□ -1.27
PPP4R3A-206ENST00000554943 RPS29P62273 56 aaKnown RBP7.15□□□□□ -1.27
PPP4R3A-206ENST00000554943 TNXBP22105 4242 aa7.13□□□□□ -1.27
PPP4R3A-206ENST00000554943 LIMD2Q9BT23 127 aa7.13□□□□□ -1.27
PPP4R3A-206ENST00000554943 Q75L30 129 aa7.13□□□□□ -1.27
PPP4R3A-206ENST00000554943 LINC01558Q9Y6Z2 57 aa7.13□□□□□ -1.27
PPP4R3A-206ENST00000554943 A0A1B0GVY2 172 aa7.12□□□□□ -1.27
PPP4R3A-206ENST00000554943 HSPG2P98160 4391 aa7.11□□□□□ -1.27
PPP4R3A-206ENST00000554943 DMAC1Q96GE9 116 aa7.1□□□□□ -1.27
PPP4R3A-206ENST00000554943 IGKV2-30P06310 120 aa7.09□□□□□ -1.27
PPP4R3A-206ENST00000554943 RBM12B-AS1Q9P1G2 102 aa7.08□□□□□ -1.28
PPP4R3A-206ENST00000554943 DMBT1Q9UGM3 2413 aaPredicted RBP7.07□□□□□ -1.28
PPP4R3A-206ENST00000554943 LINC00313P59037 77 aa7.07□□□□□ -1.28
PPP4R3A-206ENST00000554943 SPINK1P00995 79 aa7.06□□□□□ -1.28
PPP4R3A-206ENST00000554943 FAM229AH3BQW9 127 aa7.05□□□□□ -1.28
PPP4R3A-206ENST00000554943 SPINK7P58062 85 aa7.02□□□□□ -1.29
PPP4R3A-206ENST00000554943 FLG2Q5D862 2391 aaPredicted RBP7.02□□□□□ -1.29
PPP4R3A-206ENST00000554943 IGKV2D-30A0A075B6S6 120 aa7.02□□□□□ -1.29
PPP4R3A-206ENST00000554943 KTN1-AS1Q86SY8 53 aa7.01□□□□□ -1.29
PPP4R3A-206ENST00000554943 FAT1Q14517 4588 aa7.01□□□□□ -1.29
PPP4R3A-206ENST00000554943 LCA10Q71F78 164 aa7□□□□□ -1.29
PPP4R3A-206ENST00000554943 FAT3Q8TDW7 4589 aa6.98□□□□□ -1.29
PPP4R3A-206ENST00000554943 KMT2CQ8NEZ4 4911 aaKnown RBP6.97□□□□□ -1.29
PPP4R3A-206ENST00000554943 PRAC1Q96KF2 57 aa6.95□□□□□ -1.3
PPP4R3A-206ENST00000554943 PLA2G1BP04054 148 aaKnown RBP6.94□□□□□ -1.3
PPP4R3A-206ENST00000554943 ACYP2P14621 99 aa6.94□□□□□ -1.3
PPP4R3A-206ENST00000554943 C4orf48Q5BLP8 95 aa6.93□□□□□ -1.3
PPP4R3A-206ENST00000554943 C20orf166-AS1Q96NR2 134 aa6.92□□□□□ -1.3
PPP4R3A-206ENST00000554943 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
PPP4R3A-206ENST00000554943 TYMSOSQ8TAI1 123 aa6.92□□□□□ -1.3
PPP4R3A-206ENST00000554943 A8MUU9 505 aa6.91□□□□□ -1.3
PPP4R3A-206ENST00000554943 SMR3BP02814 79 aaPredicted RBP6.9□□□□□ -1.3
PPP4R3A-206ENST00000554943 ADM2Q7Z4H4 148 aa6.89□□□□□ -1.31
PPP4R3A-206ENST00000554943 Q8N1X5 172 aa6.88□□□□□ -1.31
PPP4R3A-206ENST00000554943 A6NN06 94 aa6.88□□□□□ -1.31
PPP4R3A-206ENST00000554943 ATP11AUNQ6ZP68 121 aa6.88□□□□□ -1.31
PPP4R3A-206ENST00000554943 LINC00304Q8N9R0 145 aa6.86□□□□□ -1.31
PPP4R3A-206ENST00000554943 LRP1Q07954 4544 aaKnown RBP6.84□□□□□ -1.31
PPP4R3A-206ENST00000554943 C9orf92A6NGG3 77 aa6.84□□□□□ -1.31
PPP4R3A-206ENST00000554943 RYR3Q15413 4870 aa6.82□□□□□ -1.32
PPP4R3A-206ENST00000554943 C7orf65Q6ZTY9 151 aa6.82□□□□□ -1.32
PPP4R3A-206ENST00000554943 KRTAP3-1Q9BYR8 98 aa6.81□□□□□ -1.32
PPP4R3A-206ENST00000554943 RYR1P21817 5038 aa6.8□□□□□ -1.32
PPP4R3A-206ENST00000554943 A0A1B0GU69 56 aa6.79□□□□□ -1.32
PPP4R3A-206ENST00000554943 H3BS24 57 aa6.78□□□□□ -1.32
PPP4R3A-206ENST00000554943 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
PPP4R3A-206ENST00000554943 KRTAP10-8P60410 259 aa6.75□□□□□ -1.33
PPP4R3A-206ENST00000554943 CRIPTQ9P021 101 aa6.74□□□□□ -1.33
PPP4R3A-206ENST00000554943 KRTAP17-1Q9BYP8 105 aa6.74□□□□□ -1.33
PPP4R3A-206ENST00000554943 MIR22HGQ0VDD5 57 aa6.63□□□□□ -1.35
PPP4R3A-206ENST00000554943 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
PPP4R3A-206ENST00000554943 UQCR11O14957 56 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms