RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 Q6ZVQ6 151 aa4.43□□□□□ -1.7
LINC01397-201ENST00000554808 C9orf92A6NGG3 77 aa4.42□□□□□ -1.7
LINC01397-201ENST00000554808 BPY2O14599 106 aa4.42□□□□□ -1.7
LINC01397-201ENST00000554808 XP32Q5T750 250 aa4.42□□□□□ -1.7
LINC01397-201ENST00000554808 LINC00846Q9NV44 126 aa4.42□□□□□ -1.7
LINC01397-201ENST00000554808 MUC2Q02817 5179 aa4.42□□□□□ -1.7
LINC01397-201ENST00000554808 LINC00313P59037 77 aa4.41□□□□□ -1.7
LINC01397-201ENST00000554808 SEC61BP60468 96 aaKnown RBP4.41□□□□□ -1.7
LINC01397-201ENST00000554808 DEFB116Q30KQ4 102 aa4.41□□□□□ -1.7
LINC01397-201ENST00000554808 FAT4Q6V0I7 4981 aa4.4□□□□□ -1.71
LINC01397-201ENST00000554808 IGHV6-1A0A0B4J1U7 121 aa4.4□□□□□ -1.71
LINC01397-201ENST00000554808 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.71
LINC01397-201ENST00000554808 CXCL6P80162 114 aa4.39□□□□□ -1.71
LINC01397-201ENST00000554808 ATP5EP2Q5VTU8 51 aa4.39□□□□□ -1.71
LINC01397-201ENST00000554808 Q75L30 129 aa4.39□□□□□ -1.71
LINC01397-201ENST00000554808 PRR15Q8IV56 129 aa4.39□□□□□ -1.71
LINC01397-201ENST00000554808 C20orf166-AS1Q96NR2 134 aa4.38□□□□□ -1.71
LINC01397-201ENST00000554808 IGKV3D-7A0A0C4DH55 119 aa4.37□□□□□ -1.71
LINC01397-201ENST00000554808 DSCR10P59022 87 aa4.37□□□□□ -1.71
LINC01397-201ENST00000554808 RPL37P61927 97 aaKnown RBP4.37□□□□□ -1.71
LINC01397-201ENST00000554808 C8orf17Q9NRJ1 99 aa4.37□□□□□ -1.71
LINC01397-201ENST00000554808 A8MUU9 505 aa4.36□□□□□ -1.71
LINC01397-201ENST00000554808 K7EQZ3 153 aa4.35□□□□□ -1.71
LINC01397-201ENST00000554808 K7ERU9 68 aa4.35□□□□□ -1.71
LINC01397-201ENST00000554808 ATP11AUNQ6ZP68 121 aa4.35□□□□□ -1.71
LINC01397-201ENST00000554808 KRTAP16-1A8MUX0 517 aa4.34□□□□□ -1.71
LINC01397-201ENST00000554808 LINC00643Q86TS7 51 aa4.34□□□□□ -1.71
LINC01397-201ENST00000554808 TMEM254Q8TBM7 123 aa4.34□□□□□ -1.71
LINC01397-201ENST00000554808 MMP24-AS1A0A0U1RRL7 71 aa4.33□□□□□ -1.72
LINC01397-201ENST00000554808 hDV103S1A0JD37 113 aa4.33□□□□□ -1.72
LINC01397-201ENST00000554808 Q8N9P0 234 aaPredicted RBP4.33□□□□□ -1.72
LINC01397-201ENST00000554808 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
LINC01397-201ENST00000554808 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
LINC01397-201ENST00000554808 MRPL34Q9BQ48 92 aaKnown RBP4.32□□□□□ -1.72
LINC01397-201ENST00000554808 MUC17Q685J3 4493 aa4.32□□□□□ -1.72
LINC01397-201ENST00000554808 HCG22E2RYF7 251 aa4.31□□□□□ -1.72
LINC01397-201ENST00000554808 LCE2AQ5TA79 106 aaPredicted RBP4.31□□□□□ -1.72
LINC01397-201ENST00000554808 A0A0U1RQV1 116 aa4.3□□□□□ -1.72
LINC01397-201ENST00000554808 PCOTHQ58A44 107 aa4.3□□□□□ -1.72
LINC01397-201ENST00000554808 CASC2Q6XLA1 102 aa4.3□□□□□ -1.72
LINC01397-201ENST00000554808 Q8N9L7 120 aa4.29□□□□□ -1.72
LINC01397-201ENST00000554808 WFDC13Q8IUB5 93 aa4.28□□□□□ -1.72
LINC01397-201ENST00000554808 NDUFS5O43920 106 aa4.27□□□□□ -1.73
LINC01397-201ENST00000554808 HIST1H4AP62805 103 aaKnown RBP4.27□□□□□ -1.73
LINC01397-201ENST00000554808 ZCCHC13Q8WW36 166 aaKnown RBP4.27□□□□□ -1.73
LINC01397-201ENST00000554808 TP53AIP1Q9HCN2 124 aa4.26□□□□□ -1.73
LINC01397-201ENST00000554808 IMUPQ9GZP8 106 aa4.25□□□□□ -1.73
LINC01397-201ENST00000554808 KRTAP4-1Q9BYQ7 146 aa4.19□□□□□ -1.74
LINC01397-201ENST00000554808 A0A087WVE0 104 aa4.18□□□□□ -1.74
LINC01397-201ENST00000554808 UQCRQO14949 82 aa4.18□□□□□ -1.74
LINC01397-201ENST00000554808 C7orf65Q6ZTY9 151 aa4.18□□□□□ -1.74
LINC01397-201ENST00000554808 TRAV22A0A0B4J277 110 aa4.17□□□□□ -1.74
LINC01397-201ENST00000554808 RBM12B-AS1Q9P1G2 102 aa4.17□□□□□ -1.74
LINC01397-201ENST00000554808 ATOX1O00244 68 aa4.16□□□□□ -1.74
LINC01397-201ENST00000554808 MT-ATP8P03928 68 aa4.16□□□□□ -1.74
LINC01397-201ENST00000554808 SPINK7P58062 85 aa4.16□□□□□ -1.74
LINC01397-201ENST00000554808 SCGB1A1P11684 91 aa4.15□□□□□ -1.75
LINC01397-201ENST00000554808 Q5W150 140 aa4.15□□□□□ -1.75
LINC01397-201ENST00000554808 SMIM20Q8N5G0 67 aa4.15□□□□□ -1.75
LINC01397-201ENST00000554808 COX6B2Q6YFQ2 88 aa4.14□□□□□ -1.75
LINC01397-201ENST00000554808 IGKV2D-30A0A075B6S6 120 aa4.13□□□□□ -1.75
LINC01397-201ENST00000554808 IGKV2-30P06310 120 aa4.13□□□□□ -1.75
LINC01397-201ENST00000554808 HRES1P13985 223 aa4.13□□□□□ -1.75
LINC01397-201ENST00000554808 LOC101927531A0A1B0GV80 90 aa4.12□□□□□ -1.75
LINC01397-201ENST00000554808 C5orf47Q569G3 176 aa4.12□□□□□ -1.75
LINC01397-201ENST00000554808 MPLKIPQ8TAP9 179 aa4.12□□□□□ -1.75
LINC01397-201ENST00000554808 OCR1Q9BZK8 76 aa4.12□□□□□ -1.75
LINC01397-201ENST00000554808 FAM236DA0A1B0GTK5 79 aa4.11□□□□□ -1.75
LINC01397-201ENST00000554808 FAM236AA0A1B0GUQ0 79 aa4.11□□□□□ -1.75
LINC01397-201ENST00000554808 FAM236BA0A1B0GV22 79 aa4.11□□□□□ -1.75
LINC01397-201ENST00000554808 H0Y9P7 68 aa4.11□□□□□ -1.75
LINC01397-201ENST00000554808 H3BPC8 53 aa4.11□□□□□ -1.75
LINC01397-201ENST00000554808 FAM236CP0DP71 79 aa4.11□□□□□ -1.75
LINC01397-201ENST00000554808 MP68P56378 58 aa4.11□□□□□ -1.75
LINC01397-201ENST00000554808 LCE2DQ5TA82 110 aaPredicted RBP4.1□□□□□ -1.75
LINC01397-201ENST00000554808 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
LINC01397-201ENST00000554808 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.75
LINC01397-201ENST00000554808 FSIP2Q5CZC0 6907 aa4.08□□□□□ -1.76
LINC01397-201ENST00000554808 TRAV7A0A075B6U4 112 aa4.07□□□□□ -1.76
LINC01397-201ENST00000554808 C1orf64Q8NEQ6 169 aa4.07□□□□□ -1.76
LINC01397-201ENST00000554808 CYP4F30PQ9H0H9 118 aa4.07□□□□□ -1.76
LINC01397-201ENST00000554808 LINC00208Q96KT6 92 aa4.06□□□□□ -1.76
LINC01397-201ENST00000554808 LCE2CQ5TA81 110 aa4.05□□□□□ -1.76
LINC01397-201ENST00000554808 FLGP20930 4061 aaPredicted RBP4.03□□□□□ -1.76
LINC01397-201ENST00000554808 MT1HP80294 61 aa4.02□□□□□ -1.77
LINC01397-201ENST00000554808 C4orf26Q17RF5 130 aa4.02□□□□□ -1.77
LINC01397-201ENST00000554808 H1FX-AS1Q4G0G2 97 aa4.02□□□□□ -1.77
LINC01397-201ENST00000554808 SERP2Q8N6R1 65 aa4.02□□□□□ -1.77
LINC01397-201ENST00000554808 M0R2T5 61 aa4.01□□□□□ -1.77
LINC01397-201ENST00000554808 A8MUN3 132 aa4□□□□□ -1.77
LINC01397-201ENST00000554808 PCP4P48539 62 aa3.97□□□□□ -1.77
LINC01397-201ENST00000554808 COX7CP15954 63 aa3.96□□□□□ -1.78
LINC01397-201ENST00000554808 KLKP1Q107X0 134 aa3.96□□□□□ -1.78
LINC01397-201ENST00000554808 S4R3F8 94 aa3.95□□□□□ -1.78
LINC01397-201ENST00000554808 C20orf197Q8N268 126 aa3.94□□□□□ -1.78
LINC01397-201ENST00000554808 ANAPC13Q9BS18 74 aa3.94□□□□□ -1.78
LINC01397-201ENST00000554808 KRTAP3-1Q9BYR8 98 aa3.93□□□□□ -1.78
LINC01397-201ENST00000554808 NDUFC1O43677 76 aa3.92□□□□□ -1.78
LINC01397-201ENST00000554808 LORP23490 312 aaPredicted RBP3.92□□□□□ -1.78
LINC01397-201ENST00000554808 KRTAP10-6P60371 365 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms