RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 CREBBPQ92793 2442 aa1.95□□□□□ -2.1
SEC23A-207ENST00000554615 A8MUU9 505 aa1.94□□□□□ -2.1
SEC23A-207ENST00000554615 NAV2Q8IVL1 2488 aa1.94□□□□□ -2.1
SEC23A-207ENST00000554615 KRTAP5-9P26371 169 aa1.94□□□□□ -2.1
SEC23A-207ENST00000554615 UBE2BP63146 152 aa1.94□□□□□ -2.1
SEC23A-207ENST00000554615 GCN1Q92616 2671 aaKnown RBP1.94□□□□□ -2.1
SEC23A-207ENST00000554615 TTC28Q96AY4 2481 aa1.94□□□□□ -2.1
SEC23A-207ENST00000554615 MRPL34Q9BQ48 92 aaKnown RBP1.94□□□□□ -2.1
SEC23A-207ENST00000554615 FAM30AQ9NZY2 134 aa1.94□□□□□ -2.1
SEC23A-207ENST00000554615 HERC1Q15751 4861 aa1.94□□□□□ -2.1
SEC23A-207ENST00000554615 MEGF8Q7Z7M0 2845 aa1.93□□□□□ -2.1
SEC23A-207ENST00000554615 NBASA2RRP1 2371 aa1.93□□□□□ -2.1
SEC23A-207ENST00000554615 ITPR2Q14571 2701 aa1.93□□□□□ -2.1
SEC23A-207ENST00000554615 PSORS1C2Q9UIG4 136 aa1.93□□□□□ -2.1
SEC23A-207ENST00000554615 HRES1P13985 223 aa1.93□□□□□ -2.1
SEC23A-207ENST00000554615 CASC2Q6XLA1 102 aa1.93□□□□□ -2.1
SEC23A-207ENST00000554615 ANAPC11Q9NYG5 84 aa1.93□□□□□ -2.1
SEC23A-207ENST00000554615 SNURFQ9Y675 71 aa1.93□□□□□ -2.1
SEC23A-207ENST00000554615 CENPEQ02224 2701 aa1.93□□□□□ -2.1
SEC23A-207ENST00000554615 RTL8CO15255 209 aa1.93□□□□□ -2.1
SEC23A-207ENST00000554615 HAMPP81172 84 aa1.93□□□□□ -2.1
SEC23A-207ENST00000554615 BIRC6Q9NR09 4857 aa1.93□□□□□ -2.1
SEC23A-207ENST00000554615 FN1P02751 2386 aaKnown RBP1.93□□□□□ -2.1
SEC23A-207ENST00000554615 SPATA8Q6RVD6 105 aa1.92□□□□□ -2.1
SEC23A-207ENST00000554615 KRTAP9-3Q9BYQ3 159 aa1.92□□□□□ -2.1
SEC23A-207ENST00000554615 H0Y9P7 68 aa1.92□□□□□ -2.1
SEC23A-207ENST00000554615 Q5W150 140 aa1.92□□□□□ -2.1
SEC23A-207ENST00000554615 CDC42SE1Q9NRR8 79 aa1.92□□□□□ -2.1
SEC23A-207ENST00000554615 C3orf84H3BNL1 204 aa1.92□□□□□ -2.1
SEC23A-207ENST00000554615 NOTCH2NLQ7Z3S9 236 aa1.92□□□□□ -2.1
SEC23A-207ENST00000554615 SPTA1P02549 2419 aa1.92□□□□□ -2.1
SEC23A-207ENST00000554615 A8MUN3 132 aa1.91□□□□□ -2.1
SEC23A-207ENST00000554615 HRCT1Q6UXD1 115 aa1.91□□□□□ -2.1
SEC23A-207ENST00000554615 LCA10Q71F78 164 aa1.91□□□□□ -2.1
SEC23A-207ENST00000554615 HECTD1Q9ULT8 2610 aa1.91□□□□□ -2.1
SEC23A-207ENST00000554615 FAM208BQ5VWN6 2430 aa1.91□□□□□ -2.1
SEC23A-207ENST00000554615 IGKV2D-30A0A075B6S6 120 aa1.91□□□□□ -2.1
SEC23A-207ENST00000554615 UBE2AP49459 152 aa1.91□□□□□ -2.1
SEC23A-207ENST00000554615 PRLHP81277 87 aa1.91□□□□□ -2.1
SEC23A-207ENST00000554615 A0A087WSZ3 146 aa1.91□□□□□ -2.1
SEC23A-207ENST00000554615 ATP11AUNQ6ZP68 121 aa1.9□□□□□ -2.11
SEC23A-207ENST00000554615 SCXQ7RTU7 201 aa1.9□□□□□ -2.11
SEC23A-207ENST00000554615 COA5Q86WW8 74 aa1.9□□□□□ -2.11
SEC23A-207ENST00000554615 IGHV6-1A0A0B4J1U7 121 aa1.9□□□□□ -2.11
SEC23A-207ENST00000554615 LINC00208Q96KT6 92 aa1.9□□□□□ -2.11
SEC23A-207ENST00000554615 SPTAN1Q13813 2472 aaKnown RBP1.89□□□□□ -2.11
SEC23A-207ENST00000554615 PTPN13Q12923 2485 aa1.89□□□□□ -2.11
SEC23A-207ENST00000554615 KRTAP3-1Q9BYR8 98 aa1.89□□□□□ -2.11
SEC23A-207ENST00000554615 HERC2O95714 4834 aa1.89□□□□□ -2.11
SEC23A-207ENST00000554615 KRTAP9-7A8MTY7 169 aa1.89□□□□□ -2.11
SEC23A-207ENST00000554615 PLA2G1BP04054 148 aaKnown RBP1.89□□□□□ -2.11
SEC23A-207ENST00000554615 SPINK6Q6UWN8 80 aa1.88□□□□□ -2.11
SEC23A-207ENST00000554615 WFDC13Q8IUB5 93 aa1.88□□□□□ -2.11
SEC23A-207ENST00000554615 MP68P56378 58 aa1.88□□□□□ -2.11
SEC23A-207ENST00000554615 KRTAP19-2Q3LHN2 52 aa1.88□□□□□ -2.11
SEC23A-207ENST00000554615 FAM229AH3BQW9 127 aa1.87□□□□□ -2.11
SEC23A-207ENST00000554615 KRTAP10-8P60410 259 aa1.87□□□□□ -2.11
SEC23A-207ENST00000554615 ABCA12Q86UK0 2595 aa1.87□□□□□ -2.11
SEC23A-207ENST00000554615 WNK1Q9H4A3 2382 aa1.87□□□□□ -2.11
SEC23A-207ENST00000554615 LCE4AQ5TA78 99 aa1.87□□□□□ -2.11
SEC23A-207ENST00000554615 LRP2P98164 4655 aa1.87□□□□□ -2.11
SEC23A-207ENST00000554615 SPINK1P00995 79 aa1.87□□□□□ -2.11
SEC23A-207ENST00000554615 HTN3P15516 51 aa1.87□□□□□ -2.11
SEC23A-207ENST00000554615 SORL1Q92673 2214 aa1.87□□□□□ -2.11
SEC23A-207ENST00000554615 TPRP12270 2363 aaKnown RBP1.86□□□□□ -2.11
SEC23A-207ENST00000554615 A0A0G2JQZ4 141 aa1.86□□□□□ -2.11
SEC23A-207ENST00000554615 KRTAP10-1P60331 282 aa1.86□□□□□ -2.11
SEC23A-207ENST00000554615 KRTAP10-2P60368 255 aa1.86□□□□□ -2.11
SEC23A-207ENST00000554615 SPAG11AQ6PDA7 123 aa1.86□□□□□ -2.11
SEC23A-207ENST00000554615 CIRBP-AS1Q8TBR5 109 aa1.86□□□□□ -2.11
SEC23A-207ENST00000554615 C2CD3Q4AC94 2353 aa1.85□□□□□ -2.11
SEC23A-207ENST00000554615 FLNBO75369 2602 aaKnown RBP1.84□□□□□ -2.11
SEC23A-207ENST00000554615 KRTAP19-4Q3LI73 84 aa1.84□□□□□ -2.11
SEC23A-207ENST00000554615 DEFB105AQ8NG35 78 aa1.84□□□□□ -2.11
SEC23A-207ENST00000554615 KTN1-AS1Q86SY8 53 aa1.84□□□□□ -2.11
SEC23A-207ENST00000554615 POLQO75417 2590 aa1.84□□□□□ -2.12
SEC23A-207ENST00000554615 H0YAA0 97 aa1.84□□□□□ -2.12
SEC23A-207ENST00000554615 NDUFS5O43920 106 aa1.84□□□□□ -2.12
SEC23A-207ENST00000554615 CSPG4Q6UVK1 2322 aa1.83□□□□□ -2.12
SEC23A-207ENST00000554615 ACYP2P14621 99 aa1.83□□□□□ -2.12
SEC23A-207ENST00000554615 C1orf134Q5TEV5 83 aa1.83□□□□□ -2.12
SEC23A-207ENST00000554615 LRRK2Q5S007 2527 aa1.83□□□□□ -2.12
SEC23A-207ENST00000554615 KMT2CQ8NEZ4 4911 aaKnown RBP1.82□□□□□ -2.12
SEC23A-207ENST00000554615 HELZ2Q9BYK8 2649 aaKnown RBP1.82□□□□□ -2.12
SEC23A-207ENST00000554615 NBEAL1Q6ZS30 2694 aa1.81□□□□□ -2.12
SEC23A-207ENST00000554615 PCLOQ9Y6V0 5065 aa1.81□□□□□ -2.12
SEC23A-207ENST00000554615 A8MU10 97 aa1.81□□□□□ -2.12
SEC23A-207ENST00000554615 LINC00313P59037 77 aa1.81□□□□□ -2.12
SEC23A-207ENST00000554615 KRTAP10-6P60371 365 aaPredicted RBP1.81□□□□□ -2.12
SEC23A-207ENST00000554615 SPINK7P58062 85 aa1.8□□□□□ -2.12
SEC23A-207ENST00000554615 RIF1Q5UIP0 2472 aaKnown RBP1.8□□□□□ -2.12
SEC23A-207ENST00000554615 NBEAL2Q6ZNJ1 2754 aa1.8□□□□□ -2.12
SEC23A-207ENST00000554615 CDK2AP2O75956 126 aa1.8□□□□□ -2.12
SEC23A-207ENST00000554615 ZFYVE26Q68DK2 2539 aa1.8□□□□□ -2.12
SEC23A-207ENST00000554615 MT1HL1P0DM35 61 aa1.8□□□□□ -2.12
SEC23A-207ENST00000554615 PMAIP1Q13794 54 aa1.8□□□□□ -2.12
SEC23A-207ENST00000554615 C7orf65Q6ZTY9 151 aa1.8□□□□□ -2.12
SEC23A-207ENST00000554615 TGP01266 2768 aa1.79□□□□□ -2.12
SEC23A-207ENST00000554615 SRRM2Q9UQ35 2752 aaKnown RBP1.79□□□□□ -2.12
SEC23A-207ENST00000554615 LY6G6CO95867 125 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms