RNA–Protein interactions for RNA: ENST00000554455.5

HNRNPC-211, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-211ENST00000554455 NIPBLQ6KC79 2804 aaeCLIP5.08□□□□□ -1.6
HNRNPC-211ENST00000554455 SPINT4Q6UDR6 99 aa5.06□□□□□ -1.6
HNRNPC-211ENST00000554455 C15orf56Q8N910 161 aa5.06□□□□□ -1.6
HNRNPC-211ENST00000554455 ZANQ9Y493 2812 aa5.06□□□□□ -1.6
HNRNPC-211ENST00000554455 KRTAP4-12Q9BQ66 201 aa5.05□□□□□ -1.6
HNRNPC-211ENST00000554455 FAM229AH3BQW9 127 aa5.04□□□□□ -1.6
HNRNPC-211ENST00000554455 LY6G6CO95867 125 aa5.04□□□□□ -1.6
HNRNPC-211ENST00000554455 KRTAP13-3Q3SY46 172 aa5.04□□□□□ -1.6
HNRNPC-211ENST00000554455 KRTAP11-1Q8IUC1 163 aa5.04□□□□□ -1.6
HNRNPC-211ENST00000554455 NOTCH3Q9UM47 2321 aa5.04□□□□□ -1.6
HNRNPC-211ENST00000554455 LINC01556Q5JQF7 62 aa5.04□□□□□ -1.6
HNRNPC-211ENST00000554455 Q96NJ1 140 aa5.02□□□□□ -1.61
HNRNPC-211ENST00000554455 SMR3AQ99954 134 aa5.02□□□□□ -1.61
HNRNPC-211ENST00000554455 ANK3Q12955 4377 aaKnown RBP5.01□□□□□ -1.61
HNRNPC-211ENST00000554455 PANO1I0J062 215 aa5□□□□□ -1.61
HNRNPC-211ENST00000554455 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
HNRNPC-211ENST00000554455 CIRBP-AS1Q8TBR5 109 aa5□□□□□ -1.61
HNRNPC-211ENST00000554455 MRPL34Q9BQ48 92 aaKnown RBP4.99□□□□□ -1.61
HNRNPC-211ENST00000554455 NBDYA0A0U1RRE5 68 aa4.98□□□□□ -1.61
HNRNPC-211ENST00000554455 A0A1B0GVX0 72 aa4.98□□□□□ -1.61
HNRNPC-211ENST00000554455 NBEAL1Q6ZS30 2694 aa4.97□□□□□ -1.61
HNRNPC-211ENST00000554455 SPRR1BP22528 89 aa4.97□□□□□ -1.61
HNRNPC-211ENST00000554455 KRTAP9-8Q9BYQ0 159 aa4.97□□□□□ -1.61
HNRNPC-211ENST00000554455 ACANP16112 2415 aa4.97□□□□□ -1.61
HNRNPC-211ENST00000554455 H0YAA0 97 aa4.96□□□□□ -1.61
HNRNPC-211ENST00000554455 KRTAP4-2Q9BYR5 136 aa4.96□□□□□ -1.61
HNRNPC-211ENST00000554455 MAP1AP78559 2803 aaPredicted RBP4.96□□□□□ -1.61
HNRNPC-211ENST00000554455 TLN2Q9Y4G6 2542 aa4.95□□□□□ -1.62
HNRNPC-211ENST00000554455 LCE1DQ5T752 114 aa4.95□□□□□ -1.62
HNRNPC-211ENST00000554455 PSORS1C2Q9UIG4 136 aa4.95□□□□□ -1.62
HNRNPC-211ENST00000554455 JMJD1CQ15652 2540 aa4.95□□□□□ -1.62
HNRNPC-211ENST00000554455 ZNF469Q96JG9 3925 aaPredicted RBP4.94□□□□□ -1.62
HNRNPC-211ENST00000554455 KRTAP10-11P60412 298 aa4.93□□□□□ -1.62
HNRNPC-211ENST00000554455 SSBP3-AS1Q7Z2R9 100 aa4.93□□□□□ -1.62
HNRNPC-211ENST00000554455 CAMK2N1Q7Z7J9 78 aa4.93□□□□□ -1.62
HNRNPC-211ENST00000554455 FLNAP21333 2647 aaKnown RBP4.93□□□□□ -1.62
HNRNPC-211ENST00000554455 STAB1Q9NY15 2570 aa4.93□□□□□ -1.62
HNRNPC-211ENST00000554455 COL6A5A8TX70 2615 aa4.92□□□□□ -1.62
HNRNPC-211ENST00000554455 FBN1P35555 2871 aaKnown RBP4.92□□□□□ -1.62
HNRNPC-211ENST00000554455 SONP18583 2426 aaKnown RBP4.92□□□□□ -1.62
HNRNPC-211ENST00000554455 FN1P02751 2386 aaKnown RBP4.9□□□□□ -1.62
HNRNPC-211ENST00000554455 KRTAP7-1Q8IUC3 87 aa4.9□□□□□ -1.63
HNRNPC-211ENST00000554455 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
HNRNPC-211ENST00000554455 TENM2Q9NT68 2774 aa4.9□□□□□ -1.63
HNRNPC-211ENST00000554455 ATRQ13535 2644 aa4.89□□□□□ -1.63
HNRNPC-211ENST00000554455 NSD1Q96L73 2696 aaPredicted RBP4.89□□□□□ -1.63
HNRNPC-211ENST00000554455 A0A0G2JQZ4 141 aa4.88□□□□□ -1.63
HNRNPC-211ENST00000554455 A0A1W2PNN7 141 aa4.88□□□□□ -1.63
HNRNPC-211ENST00000554455 Q6ZSA8 131 aa4.88□□□□□ -1.63
HNRNPC-211ENST00000554455 CUBNO60494 3623 aa4.87□□□□□ -1.63
HNRNPC-211ENST00000554455 HIVEP2P31629 2446 aa4.86□□□□□ -1.63
HNRNPC-211ENST00000554455 TPRXLQ17RH7 258 aa4.85□□□□□ -1.63
HNRNPC-211ENST00000554455 IGKV2-30P06310 120 aa4.83□□□□□ -1.64
HNRNPC-211ENST00000554455 K7EIL1 84 aa4.81□□□□□ -1.64
HNRNPC-211ENST00000554455 IGKV2D-30A0A075B6S6 120 aa4.8□□□□□ -1.64
HNRNPC-211ENST00000554455 A0A096LNI7 61 aa4.8□□□□□ -1.64
HNRNPC-211ENST00000554455 KRTAP24-1Q3LI83 254 aa4.8□□□□□ -1.64
HNRNPC-211ENST00000554455 C14orf177Q52M58 125 aa4.8□□□□□ -1.64
HNRNPC-211ENST00000554455 A0A1B0GU33 70 aa4.79□□□□□ -1.64
HNRNPC-211ENST00000554455 H1FX-AS1Q4G0G2 97 aa4.79□□□□□ -1.64
HNRNPC-211ENST00000554455 CRIPTQ9P021 101 aa4.79□□□□□ -1.64
HNRNPC-211ENST00000554455 NBEAL2Q6ZNJ1 2754 aa4.78□□□□□ -1.64
HNRNPC-211ENST00000554455 PRLHP81277 87 aa4.78□□□□□ -1.64
HNRNPC-211ENST00000554455 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
HNRNPC-211ENST00000554455 COX6B2Q6YFQ2 88 aa4.77□□□□□ -1.65
HNRNPC-211ENST00000554455 VWFP04275 2813 aa4.75□□□□□ -1.65
HNRNPC-211ENST00000554455 KRTAP1-5Q9BYS1 174 aa4.74□□□□□ -1.65
HNRNPC-211ENST00000554455 MEGF8Q7Z7M0 2845 aa4.73□□□□□ -1.65
HNRNPC-211ENST00000554455 DNAH1Q9P2D7 4330 aa4.73□□□□□ -1.65
HNRNPC-211ENST00000554455 KRTAP13-1Q8IUC0 172 aa4.72□□□□□ -1.65
HNRNPC-211ENST00000554455 DNAH3Q8TD57 4116 aa4.71□□□□□ -1.65
HNRNPC-211ENST00000554455 UBE2DNLQ8IWF7 75 aa4.7□□□□□ -1.66
HNRNPC-211ENST00000554455 APLNQ9ULZ1 77 aa4.7□□□□□ -1.66
HNRNPC-211ENST00000554455 TGP01266 2768 aa4.7□□□□□ -1.66
HNRNPC-211ENST00000554455 TENM1Q9UKZ4 2725 aa4.68□□□□□ -1.66
HNRNPC-211ENST00000554455 FLG2Q5D862 2391 aaPredicted RBP4.68□□□□□ -1.66
HNRNPC-211ENST00000554455 ANK2Q01484 3957 aa4.68□□□□□ -1.66
HNRNPC-211ENST00000554455 PKD1L1Q8TDX9 2849 aa4.67□□□□□ -1.66
HNRNPC-211ENST00000554455 RPL37P61927 97 aaKnown RBP4.66□□□□□ -1.66
HNRNPC-211ENST00000554455 KRTAP4-5Q9BYR2 181 aa4.65□□□□□ -1.66
HNRNPC-211ENST00000554455 Q6ZRN7 208 aaPredicted RBP4.65□□□□□ -1.67
HNRNPC-211ENST00000554455 SPACA4Q8TDM5 124 aa4.65□□□□□ -1.67
HNRNPC-211ENST00000554455 CMYA5Q8N3K9 4069 aa4.63□□□□□ -1.67
HNRNPC-211ENST00000554455 MGAM2Q2M2H8 2515 aa4.63□□□□□ -1.67
HNRNPC-211ENST00000554455 NOTCH1P46531 2555 aa4.63□□□□□ -1.67
HNRNPC-211ENST00000554455 TYMSOSQ8TAI1 123 aa4.63□□□□□ -1.67
HNRNPC-211ENST00000554455 PRO2289Q9P1D8 64 aa4.63□□□□□ -1.67
HNRNPC-211ENST00000554455 TENM3Q9P273 2699 aa4.62□□□□□ -1.67
HNRNPC-211ENST00000554455 C10orf95Q9H7T3 257 aa4.61□□□□□ -1.67
HNRNPC-211ENST00000554455 TRRAPQ9Y4A5 3859 aa4.61□□□□□ -1.67
HNRNPC-211ENST00000554455 WWC2-AS2Q96NR7 200 aa4.6□□□□□ -1.67
HNRNPC-211ENST00000554455 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
HNRNPC-211ENST00000554455 HUWE1Q7Z6Z7 4374 aaKnown RBP4.58□□□□□ -1.68
HNRNPC-211ENST00000554455 PLAC4Q8WY50 150 aa4.56□□□□□ -1.68
HNRNPC-211ENST00000554455 SPINK1P00995 79 aa4.55□□□□□ -1.68
HNRNPC-211ENST00000554455 DYNC2H1Q8NCM8 4307 aaKnown RBP4.55□□□□□ -1.68
HNRNPC-211ENST00000554455 PRKDCP78527 4128 aaKnown RBP4.5□□□□□ -1.69
HNRNPC-211ENST00000554455 KMT2CQ8NEZ4 4911 aaKnown RBP4.49□□□□□ -1.69
HNRNPC-211ENST00000554455 RYR3Q15413 4870 aa4.49□□□□□ -1.69
HNRNPC-211ENST00000554455 DNAH10Q8IVF4 4471 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms