RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 NOTCH2NLQ7Z3S9 236 aa10.17□□□□□ -0.78
PPP4R3A-202ENST00000554390 MEGF8Q7Z7M0 2845 aa10.16□□□□□ -0.78
PPP4R3A-202ENST00000554390 C14orf177Q52M58 125 aa10.16□□□□□ -0.78
PPP4R3A-202ENST00000554390 SPINK6Q6UWN8 80 aa10.15□□□□□ -0.78
PPP4R3A-202ENST00000554390 DNAH8Q96JB1 4490 aa10.14□□□□□ -0.79
PPP4R3A-202ENST00000554390 LINC00313P59037 77 aa10.14□□□□□ -0.79
PPP4R3A-202ENST00000554390 MDFIQ99750 246 aa10.14□□□□□ -0.79
PPP4R3A-202ENST00000554390 A0A1B0GVX0 72 aa10.14□□□□□ -0.79
PPP4R3A-202ENST00000554390 MRPL34Q9BQ48 92 aaKnown RBP10.13□□□□□ -0.79
PPP4R3A-202ENST00000554390 PRAC1Q96KF2 57 aa10.13□□□□□ -0.79
PPP4R3A-202ENST00000554390 HECTD4Q9Y4D8 3996 aa10.13□□□□□ -0.79
PPP4R3A-202ENST00000554390 C8orf87E5RJ46 101 aa10.11□□□□□ -0.79
PPP4R3A-202ENST00000554390 NBDYA0A0U1RRE5 68 aa10.1□□□□□ -0.79
PPP4R3A-202ENST00000554390 PRKDCP78527 4128 aaKnown RBP10.09□□□□□ -0.79
PPP4R3A-202ENST00000554390 CDK2AP2O75956 126 aa10.08□□□□□ -0.8
PPP4R3A-202ENST00000554390 KRTAP13-1Q8IUC0 172 aa10.08□□□□□ -0.8
PPP4R3A-202ENST00000554390 DNAH17Q9UFH2 4485 aa10.07□□□□□ -0.8
PPP4R3A-202ENST00000554390 ADM2Q7Z4H4 148 aa10.06□□□□□ -0.8
PPP4R3A-202ENST00000554390 DNAH2Q9P225 4427 aa10.06□□□□□ -0.8
PPP4R3A-202ENST00000554390 Q6ZRN7 208 aaPredicted RBP10.05□□□□□ -0.8
PPP4R3A-202ENST00000554390 PSORS1C2Q9UIG4 136 aa10.05□□□□□ -0.8
PPP4R3A-202ENST00000554390 Q5W150 140 aa10.04□□□□□ -0.8
PPP4R3A-202ENST00000554390 RETNLBQ9BQ08 111 aa10.03□□□□□ -0.8
PPP4R3A-202ENST00000554390 DNAH6Q9C0G6 4158 aa10.03□□□□□ -0.8
PPP4R3A-202ENST00000554390 SPACA4Q8TDM5 124 aa10.01□□□□□ -0.81
PPP4R3A-202ENST00000554390 DYNC2H1Q8NCM8 4307 aaKnown RBP10.01□□□□□ -0.81
PPP4R3A-202ENST00000554390 ACYP2P14621 99 aa10.01□□□□□ -0.81
PPP4R3A-202ENST00000554390 VPS13DQ5THJ4 4388 aa10□□□□□ -0.81
PPP4R3A-202ENST00000554390 WWC2-AS2Q96NR7 200 aa9.99□□□□□ -0.81
PPP4R3A-202ENST00000554390 PLA2G1BP04054 148 aaKnown RBP9.99□□□□□ -0.81
PPP4R3A-202ENST00000554390 CIRBP-AS1Q8TBR5 109 aa9.97□□□□□ -0.81
PPP4R3A-202ENST00000554390 KRTAP13-3Q3SY46 172 aa9.96□□□□□ -0.81
PPP4R3A-202ENST00000554390 A0A087WTM6 91 aa9.96□□□□□ -0.82
PPP4R3A-202ENST00000554390 LINC00483Q53H64 154 aa9.96□□□□□ -0.82
PPP4R3A-202ENST00000554390 C4orf48Q5BLP8 95 aa9.96□□□□□ -0.82
PPP4R3A-202ENST00000554390 RTL8CO15255 209 aa9.95□□□□□ -0.82
PPP4R3A-202ENST00000554390 ALMS1Q8TCU4 4167 aa9.94□□□□□ -0.82
PPP4R3A-202ENST00000554390 A0A1B0GU69 56 aa9.93□□□□□ -0.82
PPP4R3A-202ENST00000554390 LINC01554Q52M75 96 aa9.93□□□□□ -0.82
PPP4R3A-202ENST00000554390 IGLV5-52A0A0A0MRZ9 124 aa9.91□□□□□ -0.82
PPP4R3A-202ENST00000554390 DNAH11Q96DT5 4516 aa9.9□□□□□ -0.82
PPP4R3A-202ENST00000554390 NUPR2A6NF83 97 aa9.9□□□□□ -0.82
PPP4R3A-202ENST00000554390 SPATA8Q6RVD6 105 aa9.9□□□□□ -0.82
PPP4R3A-202ENST00000554390 DMAC1Q96GE9 116 aa9.9□□□□□ -0.82
PPP4R3A-202ENST00000554390 ZNF706Q9Y5V0 76 aaPredicted RBP9.87□□□□□ -0.83
PPP4R3A-202ENST00000554390 ZNF861PO60384 105 aa9.86□□□□□ -0.83
PPP4R3A-202ENST00000554390 MIR22HGQ0VDD5 57 aa9.84□□□□□ -0.83
PPP4R3A-202ENST00000554390 DNHD1Q96M86 4753 aa9.82□□□□□ -0.84
PPP4R3A-202ENST00000554390 UQCR11O14957 56 aa9.81□□□□□ -0.84
PPP4R3A-202ENST00000554390 LRP1BQ9NZR2 4599 aa9.78□□□□□ -0.84
PPP4R3A-202ENST00000554390 LY6G6CO95867 125 aa9.75□□□□□ -0.85
PPP4R3A-202ENST00000554390 IGLV7-43P04211 117 aa9.74□□□□□ -0.85
PPP4R3A-202ENST00000554390 CSAG1Q6PB30 78 aa9.74□□□□□ -0.85
PPP4R3A-202ENST00000554390 DNAH5Q8TE73 4624 aa9.74□□□□□ -0.85
PPP4R3A-202ENST00000554390 H3BS24 57 aa9.73□□□□□ -0.85
PPP4R3A-202ENST00000554390 FAM229AH3BQW9 127 aa9.72□□□□□ -0.85
PPP4R3A-202ENST00000554390 HYDINQ4G0P3 5121 aa9.72□□□□□ -0.85
PPP4R3A-202ENST00000554390 IGKV2-30P06310 120 aa9.72□□□□□ -0.85
PPP4R3A-202ENST00000554390 KRTAP10-2P60368 255 aa9.72□□□□□ -0.85
PPP4R3A-202ENST00000554390 C1orf134Q5TEV5 83 aa9.68□□□□□ -0.86
PPP4R3A-202ENST00000554390 FAT2Q9NYQ8 4349 aa9.65□□□□□ -0.86
PPP4R3A-202ENST00000554390 VPS13BQ7Z7G8 4022 aa9.64□□□□□ -0.87
PPP4R3A-202ENST00000554390 IGKV2D-30A0A075B6S6 120 aa9.64□□□□□ -0.87
PPP4R3A-202ENST00000554390 KRTAP13-2Q52LG2 175 aa9.63□□□□□ -0.87
PPP4R3A-202ENST00000554390 SSBP3-AS1Q7Z2R9 100 aa9.56□□□□□ -0.88
PPP4R3A-202ENST00000554390 SPINK1P00995 79 aa9.56□□□□□ -0.88
PPP4R3A-202ENST00000554390 KRTAP10-1P60331 282 aa9.54□□□□□ -0.88
PPP4R3A-202ENST00000554390 KRTAP16-1A8MUX0 517 aa9.53□□□□□ -0.88
PPP4R3A-202ENST00000554390 PKHD1P08F94 4074 aa9.53□□□□□ -0.88
PPP4R3A-202ENST00000554390 PKD1P98161 4303 aa9.49□□□□□ -0.89
PPP4R3A-202ENST00000554390 Q8N1X5 172 aa9.48□□□□□ -0.89
PPP4R3A-202ENST00000554390 KRTAP1-4P0C5Y4 121 aa9.41□□□□□ -0.9
PPP4R3A-202ENST00000554390 A8MUU9 505 aa9.4□□□□□ -0.9
PPP4R3A-202ENST00000554390 Q6ZSA8 131 aa9.4□□□□□ -0.9
PPP4R3A-202ENST00000554390 H0YAA0 97 aa9.39□□□□□ -0.91
PPP4R3A-202ENST00000554390 KRTAP25-1Q3LHN0 102 aa9.38□□□□□ -0.91
PPP4R3A-202ENST00000554390 FAT1Q14517 4588 aa9.37□□□□□ -0.91
PPP4R3A-202ENST00000554390 SMR3BP02814 79 aaPredicted RBP9.36□□□□□ -0.91
PPP4R3A-202ENST00000554390 LINC00304Q8N9R0 145 aa9.36□□□□□ -0.91
PPP4R3A-202ENST00000554390 FLG2Q5D862 2391 aaPredicted RBP9.35□□□□□ -0.91
PPP4R3A-202ENST00000554390 TYMSOSQ8TAI1 123 aa9.35□□□□□ -0.91
PPP4R3A-202ENST00000554390 C9orf92A6NGG3 77 aa9.34□□□□□ -0.91
PPP4R3A-202ENST00000554390 ROMO1P60602 79 aa9.31□□□□□ -0.92
PPP4R3A-202ENST00000554390 A0A1B0GU33 70 aa9.25□□□□□ -0.93
PPP4R3A-202ENST00000554390 DMBT1Q9UGM3 2413 aaPredicted RBP9.22□□□□□ -0.93
PPP4R3A-202ENST00000554390 CRIPTQ9P021 101 aa9.21□□□□□ -0.94
PPP4R3A-202ENST00000554390 H1FX-AS1Q4G0G2 97 aa9.19□□□□□ -0.94
PPP4R3A-202ENST00000554390 DYNC1H1Q14204 4646 aaKnown RBP9.16□□□□□ -0.94
PPP4R3A-202ENST00000554390 KRTAP3-1Q9BYR8 98 aa9.12□□□□□ -0.95
PPP4R3A-202ENST00000554390 SACSQ9NZJ4 4579 aa9.11□□□□□ -0.95
PPP4R3A-202ENST00000554390 MYCBP2O75592 4640 aa9.09□□□□□ -0.95
PPP4R3A-202ENST00000554390 P0C880 135 aa9.07□□□□□ -0.96
PPP4R3A-202ENST00000554390 K7ERS5 55 aa9.07□□□□□ -0.96
PPP4R3A-202ENST00000554390 LRP1Q07954 4544 aaKnown RBP9.06□□□□□ -0.96
PPP4R3A-202ENST00000554390 COX6B2Q6YFQ2 88 aa9.02□□□□□ -0.97
PPP4R3A-202ENST00000554390 APOBP04114 4563 aaKnown RBP8.97□□□□□ -0.97
PPP4R3A-202ENST00000554390 HSPG2P98160 4391 aa8.93□□□□□ -0.98
PPP4R3A-202ENST00000554390 PKHD1L1Q86WI1 4243 aa8.92□□□□□ -0.98
PPP4R3A-202ENST00000554390 KMT2CQ8NEZ4 4911 aaKnown RBP8.92□□□□□ -0.98
PPP4R3A-202ENST00000554390 C20orf166-AS1Q96NR2 134 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms