RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 A0A1W2PNM2 257 aa3.74□□□□□ -1.81
VPS33B-203ENST00000554264 MRPL55Q7Z7F7 128 aaKnown RBP3.74□□□□□ -1.81
VPS33B-203ENST00000554264 SPANXA2-OT1Q8N9U9 137 aa3.74□□□□□ -1.81
VPS33B-203ENST00000554264 HERC1Q15751 4861 aa3.73□□□□□ -1.81
VPS33B-203ENST00000554264 NBDYA0A0U1RRE5 68 aa3.73□□□□□ -1.81
VPS33B-203ENST00000554264 KRTAP10-7P60409 375 aaPredicted RBP3.73□□□□□ -1.81
VPS33B-203ENST00000554264 C1orf195Q5TG92 126 aa3.73□□□□□ -1.81
VPS33B-203ENST00000554264 HIGD2AQ9BW72 106 aa3.73□□□□□ -1.81
VPS33B-203ENST00000554264 H0Y9J4 135 aa3.72□□□□□ -1.81
VPS33B-203ENST00000554264 REG3GQ6UW15 175 aa3.72□□□□□ -1.81
VPS33B-203ENST00000554264 PRR15Q8IV56 129 aa3.72□□□□□ -1.81
VPS33B-203ENST00000554264 DEFB105AQ8NG35 78 aa3.72□□□□□ -1.81
VPS33B-203ENST00000554264 BRK1Q8WUW1 75 aa3.72□□□□□ -1.81
VPS33B-203ENST00000554264 DSCR10P59022 87 aa3.71□□□□□ -1.82
VPS33B-203ENST00000554264 UBE2BP63146 152 aa3.71□□□□□ -1.82
VPS33B-203ENST00000554264 C14orf177Q52M58 125 aa3.71□□□□□ -1.82
VPS33B-203ENST00000554264 Q8N9L7 120 aa3.71□□□□□ -1.82
VPS33B-203ENST00000554264 Q9BRP9 147 aa3.71□□□□□ -1.82
VPS33B-203ENST00000554264 LINC00588Q9Y4M8 146 aa3.71□□□□□ -1.82
VPS33B-203ENST00000554264 DMBT1Q9UGM3 2413 aaPredicted RBP3.71□□□□□ -1.82
VPS33B-203ENST00000554264 PSCAO43653 123 aa3.7□□□□□ -1.82
VPS33B-203ENST00000554264 SPRR1BP22528 89 aa3.7□□□□□ -1.82
VPS33B-203ENST00000554264 LINC00474Q9P2X8 69 aa3.7□□□□□ -1.82
VPS33B-203ENST00000554264 LRP1BQ9NZR2 4599 aa3.7□□□□□ -1.82
VPS33B-203ENST00000554264 K7EQZ3 153 aa3.69□□□□□ -1.82
VPS33B-203ENST00000554264 RPL37AP61513 92 aaKnown RBP3.69□□□□□ -1.82
VPS33B-203ENST00000554264 CNBPP62633 177 aaKnown RBP3.69□□□□□ -1.82
VPS33B-203ENST00000554264 NOTCH2NLQ7Z3S9 236 aa3.69□□□□□ -1.82
VPS33B-203ENST00000554264 C1orf64Q8NEQ6 169 aa3.69□□□□□ -1.82
VPS33B-203ENST00000554264 LIMD2Q9BT23 127 aa3.69□□□□□ -1.82
VPS33B-203ENST00000554264 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.68□□□□□ -1.82
VPS33B-203ENST00000554264 TRAV22A0A0B4J277 110 aa3.68□□□□□ -1.82
VPS33B-203ENST00000554264 Q5VSD8 79 aa3.68□□□□□ -1.82
VPS33B-203ENST00000554264 TP53AIP1Q9HCN2 124 aa3.68□□□□□ -1.82
VPS33B-203ENST00000554264 APOBP04114 4563 aaKnown RBP3.67□□□□□ -1.82
VPS33B-203ENST00000554264 A8MWP4 228 aa3.67□□□□□ -1.82
VPS33B-203ENST00000554264 IGFL1Q6UW32 110 aa3.67□□□□□ -1.82
VPS33B-203ENST00000554264 FAM229BQ4G0N7 80 aa3.66□□□□□ -1.82
VPS33B-203ENST00000554264 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
VPS33B-203ENST00000554264 CASC2Q6XLA1 102 aa3.66□□□□□ -1.82
VPS33B-203ENST00000554264 KRTAP7-1Q8IUC3 87 aa3.66□□□□□ -1.82
VPS33B-203ENST00000554264 DNAH5Q8TE73 4624 aa3.65□□□□□ -1.82
VPS33B-203ENST00000554264 A0A087X002 238 aa3.65□□□□□ -1.83
VPS33B-203ENST00000554264 UBE2AP49459 152 aa3.65□□□□□ -1.83
VPS33B-203ENST00000554264 MOBPQ13875 183 aa3.65□□□□□ -1.83
VPS33B-203ENST00000554264 ST20-AS1Q8NBB2 130 aa3.65□□□□□ -1.83
VPS33B-203ENST00000554264 LINC00208Q96KT6 92 aa3.65□□□□□ -1.83
VPS33B-203ENST00000554264 A0A087WSZ3 146 aa3.64□□□□□ -1.83
VPS33B-203ENST00000554264 IGLV9-49A0A0B4J1Y8 123 aa3.64□□□□□ -1.83
VPS33B-203ENST00000554264 H0Y9P7 68 aa3.64□□□□□ -1.83
VPS33B-203ENST00000554264 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
VPS33B-203ENST00000554264 FAM168BA1KXE4 195 aa3.63□□□□□ -1.83
VPS33B-203ENST00000554264 PMAIP1Q13794 54 aa3.62□□□□□ -1.83
VPS33B-203ENST00000554264 Q6ZRN7 208 aaPredicted RBP3.62□□□□□ -1.83
VPS33B-203ENST00000554264 PRAC1Q96KF2 57 aa3.62□□□□□ -1.83
VPS33B-203ENST00000554264 LINC00472Q9H8W2 130 aa3.62□□□□□ -1.83
VPS33B-203ENST00000554264 ZNF706Q9Y5V0 76 aaPredicted RBP3.62□□□□□ -1.83
VPS33B-203ENST00000554264 IGLV7-46A0A075B6I9 117 aa3.61□□□□□ -1.83
VPS33B-203ENST00000554264 LOC101927531A0A1B0GV80 90 aa3.61□□□□□ -1.83
VPS33B-203ENST00000554264 SMR3BP02814 79 aaPredicted RBP3.61□□□□□ -1.83
VPS33B-203ENST00000554264 WFDC13Q8IUB5 93 aa3.61□□□□□ -1.83
VPS33B-203ENST00000554264 C9orf163Q8N9P6 203 aa3.61□□□□□ -1.83
VPS33B-203ENST00000554264 FLG2Q5D862 2391 aaPredicted RBP3.61□□□□□ -1.83
VPS33B-203ENST00000554264 FAT1Q14517 4588 aa3.6□□□□□ -1.83
VPS33B-203ENST00000554264 A0A096LNI7 61 aa3.6□□□□□ -1.83
VPS33B-203ENST00000554264 KRTAP10-1P60331 282 aa3.6□□□□□ -1.83
VPS33B-203ENST00000554264 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
VPS33B-203ENST00000554264 MYCBP2O75592 4640 aa3.6□□□□□ -1.83
VPS33B-203ENST00000554264 UBR4Q5T4S7 5183 aa3.59□□□□□ -1.83
VPS33B-203ENST00000554264 A0A087WTM6 91 aa3.59□□□□□ -1.83
VPS33B-203ENST00000554264 ASB16-AS1Q495Z4 193 aa3.59□□□□□ -1.83
VPS33B-203ENST00000554264 ATP11AUNQ6ZP68 121 aa3.59□□□□□ -1.83
VPS33B-203ENST00000554264 MMP24-AS1A0A0U1RRL7 71 aa3.58□□□□□ -1.84
VPS33B-203ENST00000554264 NDUFS5O43920 106 aa3.58□□□□□ -1.84
VPS33B-203ENST00000554264 SEC61GP60059 68 aa3.58□□□□□ -1.84
VPS33B-203ENST00000554264 PRLHP81277 87 aa3.58□□□□□ -1.84
VPS33B-203ENST00000554264 CHKB-CPT1BH3BT56 60 aa3.57□□□□□ -1.84
VPS33B-203ENST00000554264 PSPHP1O15172 72 aa3.57□□□□□ -1.84
VPS33B-203ENST00000554264 LINC00483Q53H64 154 aa3.57□□□□□ -1.84
VPS33B-203ENST00000554264 Q5VV11 94 aa3.57□□□□□ -1.84
VPS33B-203ENST00000554264 IGKV2-24A0A0C4DH68 120 aa3.56□□□□□ -1.84
VPS33B-203ENST00000554264 A8MUN3 132 aa3.56□□□□□ -1.84
VPS33B-203ENST00000554264 CD164Q04900 197 aa3.56□□□□□ -1.84
VPS33B-203ENST00000554264 KRTAP13-1Q8IUC0 172 aa3.56□□□□□ -1.84
VPS33B-203ENST00000554264 LINC01558Q9Y6Z2 57 aa3.56□□□□□ -1.84
VPS33B-203ENST00000554264 SRRM2Q9UQ35 2752 aaKnown RBP3.55□□□□□ -1.84
VPS33B-203ENST00000554264 A0A1W2PNN7 141 aa3.55□□□□□ -1.84
VPS33B-203ENST00000554264 COA5Q86WW8 74 aa3.55□□□□□ -1.84
VPS33B-203ENST00000554264 PRR15LQ9BU68 103 aa3.55□□□□□ -1.84
VPS33B-203ENST00000554264 CDC42SE1Q9NRR8 79 aa3.55□□□□□ -1.84
VPS33B-203ENST00000554264 A0A1B0GVX0 72 aa3.54□□□□□ -1.84
VPS33B-203ENST00000554264 LRCOL1A6NCL2 159 aa3.54□□□□□ -1.84
VPS33B-203ENST00000554264 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
VPS33B-203ENST00000554264 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
VPS33B-203ENST00000554264 C8orf17Q9NRJ1 99 aa3.54□□□□□ -1.84
VPS33B-203ENST00000554264 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
VPS33B-203ENST00000554264 A6NED7 52 aa3.53□□□□□ -1.84
VPS33B-203ENST00000554264 KRTAP16-1A8MUX0 517 aa3.53□□□□□ -1.84
VPS33B-203ENST00000554264 C8orf87E5RJ46 101 aa3.53□□□□□ -1.84
VPS33B-203ENST00000554264 PRR4Q16378 134 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms