RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 ABCA13Q86UQ4 5058 aa1.88□□□□□ -2.11
LRFN5-204ENST00000554171 DEFB130BP0DP73 79 aa1.88□□□□□ -2.11
LRFN5-204ENST00000554171 DEFB130AP0DP74 79 aa1.88□□□□□ -2.11
LRFN5-204ENST00000554171 H1FX-AS1Q4G0G2 97 aa1.88□□□□□ -2.11
LRFN5-204ENST00000554171 KRTAP13-4Q3LI77 160 aa1.87□□□□□ -2.11
LRFN5-204ENST00000554171 MXRA5Q9NR99 2828 aa1.87□□□□□ -2.11
LRFN5-204ENST00000554171 ZNF462Q96JM2 2506 aa1.87□□□□□ -2.11
LRFN5-204ENST00000554171 CEP295Q9C0D2 2601 aa1.87□□□□□ -2.11
LRFN5-204ENST00000554171 COX6B2Q6YFQ2 88 aa1.86□□□□□ -2.11
LRFN5-204ENST00000554171 DEFB119Q8N690 84 aa1.86□□□□□ -2.11
LRFN5-204ENST00000554171 APOBP04114 4563 aaKnown RBP1.86□□□□□ -2.11
LRFN5-204ENST00000554171 COL6A6A6NMZ7 2263 aa1.86□□□□□ -2.11
LRFN5-204ENST00000554171 MRPL34Q9BQ48 92 aaKnown RBP1.86□□□□□ -2.11
LRFN5-204ENST00000554171 MINOS1Q5TGZ0 78 aa1.86□□□□□ -2.11
LRFN5-204ENST00000554171 CEP250Q9BV73 2442 aa1.85□□□□□ -2.11
LRFN5-204ENST00000554171 DYNC1H1Q14204 4646 aaKnown RBP1.85□□□□□ -2.11
LRFN5-204ENST00000554171 LRP1Q07954 4544 aaKnown RBP1.85□□□□□ -2.11
LRFN5-204ENST00000554171 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.85□□□□□ -2.11
LRFN5-204ENST00000554171 DEFB110Q30KQ9 67 aa1.85□□□□□ -2.11
LRFN5-204ENST00000554171 ITPR3Q14573 2671 aa1.85□□□□□ -2.11
LRFN5-204ENST00000554171 SPRR1BP22528 89 aa1.85□□□□□ -2.11
LRFN5-204ENST00000554171 KRTAP10-6P60371 365 aaPredicted RBP1.84□□□□□ -2.11
LRFN5-204ENST00000554171 PLECQ15149 4684 aaKnown RBP1.84□□□□□ -2.11
LRFN5-204ENST00000554171 NCOR2Q9Y618 2525 aa1.84□□□□□ -2.11
LRFN5-204ENST00000554171 ZANQ9Y493 2812 aa1.84□□□□□ -2.11
LRFN5-204ENST00000554171 C4orf3Q8WVX3 66 aa1.84□□□□□ -2.11
LRFN5-204ENST00000554171 SPTY2D1-AS1A0A0U1RR47 76 aa1.84□□□□□ -2.12
LRFN5-204ENST00000554171 FAT1Q14517 4588 aa1.84□□□□□ -2.12
LRFN5-204ENST00000554171 USP9XQ93008 2570 aaPredicted RBP1.84□□□□□ -2.12
LRFN5-204ENST00000554171 DEFB131AP59861 70 aa1.83□□□□□ -2.12
LRFN5-204ENST00000554171 IGKV2-30P06310 120 aa1.83□□□□□ -2.12
LRFN5-204ENST00000554171 LCE1DQ5T752 114 aa1.83□□□□□ -2.12
LRFN5-204ENST00000554171 CACNA1HO95180 2353 aa1.83□□□□□ -2.12
LRFN5-204ENST00000554171 CACNA1EQ15878 2313 aa1.83□□□□□ -2.12
LRFN5-204ENST00000554171 TENM1Q9UKZ4 2725 aa1.83□□□□□ -2.12
LRFN5-204ENST00000554171 IGKV2D-30A0A075B6S6 120 aa1.83□□□□□ -2.12
LRFN5-204ENST00000554171 U3KQA8 63 aa1.83□□□□□ -2.12
LRFN5-204ENST00000554171 ZFYVE26Q68DK2 2539 aa1.81□□□□□ -2.12
LRFN5-204ENST00000554171 SRRM2Q9UQ35 2752 aaKnown RBP1.81□□□□□ -2.12
LRFN5-204ENST00000554171 NSD1Q96L73 2696 aaPredicted RBP1.81□□□□□ -2.12
LRFN5-204ENST00000554171 ABCA12Q86UK0 2595 aa1.81□□□□□ -2.12
LRFN5-204ENST00000554171 KRTAP10-11P60412 298 aa1.81□□□□□ -2.12
LRFN5-204ENST00000554171 PCNX1Q96RV3 2341 aa1.81□□□□□ -2.12
LRFN5-204ENST00000554171 PTPN13Q12923 2485 aa1.8□□□□□ -2.12
LRFN5-204ENST00000554171 TGP01266 2768 aa1.8□□□□□ -2.12
LRFN5-204ENST00000554171 FLG2Q5D862 2391 aaPredicted RBP1.8□□□□□ -2.12
LRFN5-204ENST00000554171 ACACBO00763 2458 aa1.8□□□□□ -2.12
LRFN5-204ENST00000554171 LRP1BQ9NZR2 4599 aa1.8□□□□□ -2.12
LRFN5-204ENST00000554171 RPL37P61927 97 aaKnown RBP1.8□□□□□ -2.12
LRFN5-204ENST00000554171 LCE5AQ5TCM9 118 aa1.8□□□□□ -2.12
LRFN5-204ENST00000554171 KRTAP4-7Q9BYR0 210 aa1.8□□□□□ -2.12
LRFN5-204ENST00000554171 CNOT1A5YKK6 2376 aaKnown RBP1.79□□□□□ -2.12
LRFN5-204ENST00000554171 FAM186AA6NE01 2351 aa1.79□□□□□ -2.12
LRFN5-204ENST00000554171 PLCE1Q9P212 2302 aa1.79□□□□□ -2.12
LRFN5-204ENST00000554171 HECTD1Q9ULT8 2610 aa1.79□□□□□ -2.12
LRFN5-204ENST00000554171 FAM208BQ5VWN6 2430 aa1.79□□□□□ -2.12
LRFN5-204ENST00000554171 TOMM7Q9P0U1 55 aa1.79□□□□□ -2.12
LRFN5-204ENST00000554171 WNK1Q9H4A3 2382 aa1.79□□□□□ -2.12
LRFN5-204ENST00000554171 MAPK1IP1LQ8NDC0 245 aa1.78□□□□□ -2.12
LRFN5-204ENST00000554171 KRTAP13-2Q52LG2 175 aa1.78□□□□□ -2.12
LRFN5-204ENST00000554171 KRTAP4-2Q9BYR5 136 aa1.78□□□□□ -2.12
LRFN5-204ENST00000554171 TEP1Q99973 2627 aaKnown RBP1.78□□□□□ -2.12
LRFN5-204ENST00000554171 USP9YO00507 2555 aaPredicted RBP1.78□□□□□ -2.13
LRFN5-204ENST00000554171 KRTAP4-9Q9BYQ8 210 aa1.77□□□□□ -2.13
LRFN5-204ENST00000554171 ZDBF2Q9HCK1 2354 aa1.77□□□□□ -2.13
LRFN5-204ENST00000554171 CD52P31358 61 aa1.77□□□□□ -2.13
LRFN5-204ENST00000554171 AHCTF1Q8WYP5 2266 aa1.77□□□□□ -2.13
LRFN5-204ENST00000554171 MUC17Q685J3 4493 aa1.76□□□□□ -2.13
LRFN5-204ENST00000554171 GPR179Q6PRD1 2367 aa1.76□□□□□ -2.13
LRFN5-204ENST00000554171 KRTAP4-11Q9BYQ6 195 aa1.75□□□□□ -2.13
LRFN5-204ENST00000554171 CACNA1BQ00975 2339 aa1.75□□□□□ -2.13
LRFN5-204ENST00000554171 KRTAP12-1P59990 96 aa1.75□□□□□ -2.13
LRFN5-204ENST00000554171 SPINK13Q1W4C9 94 aa1.75□□□□□ -2.13
LRFN5-204ENST00000554171 KRTAP19-4Q3LI73 84 aa1.75□□□□□ -2.13
LRFN5-204ENST00000554171 KIAA1109Q2LD37 5005 aa1.74□□□□□ -2.13
LRFN5-204ENST00000554171 SPTBN1Q01082 2364 aaKnown RBP1.74□□□□□ -2.13
LRFN5-204ENST00000554171 NBEAL1Q6ZS30 2694 aa1.73□□□□□ -2.13
LRFN5-204ENST00000554171 CACNA1GO43497 2377 aa1.73□□□□□ -2.13
LRFN5-204ENST00000554171 ICE1Q9Y2F5 2266 aa1.73□□□□□ -2.13
LRFN5-204ENST00000554171 KRTAP13-1Q8IUC0 172 aa1.73□□□□□ -2.13
LRFN5-204ENST00000554171 S4R3F8 94 aa1.73□□□□□ -2.13
LRFN5-204ENST00000554171 CNTRLQ7Z7A1 2325 aa1.73□□□□□ -2.13
LRFN5-204ENST00000554171 NOTCH2Q04721 2471 aa1.73□□□□□ -2.13
LRFN5-204ENST00000554171 ABCA1O95477 2261 aa1.72□□□□□ -2.13
LRFN5-204ENST00000554171 KRTAP6-3Q3LI67 103 aa1.72□□□□□ -2.13
LRFN5-204ENST00000554171 RHPN1-AS1Q9BWJ2 59 aa1.72□□□□□ -2.13
LRFN5-204ENST00000554171 KRTAP10-10P60014 251 aa1.71□□□□□ -2.14
LRFN5-204ENST00000554171 DEFB105AQ8NG35 78 aa1.71□□□□□ -2.14
LRFN5-204ENST00000554171 KRTAP10-1P60331 282 aa1.71□□□□□ -2.14
LRFN5-204ENST00000554171 DOPEY1Q5JWR5 2465 aa1.7□□□□□ -2.14
LRFN5-204ENST00000554171 H3BUA1 57 aa1.7□□□□□ -2.14
LRFN5-204ENST00000554171 WNK2Q9Y3S1 2297 aa1.69□□□□□ -2.14
LRFN5-204ENST00000554171 KRTAP1-1Q07627 177 aa1.69□□□□□ -2.14
LRFN5-204ENST00000554171 FASNP49327 2511 aaKnown RBP1.69□□□□□ -2.14
LRFN5-204ENST00000554171 LRP2P98164 4655 aa1.69□□□□□ -2.14
LRFN5-204ENST00000554171 KRTAP4-5Q9BYR2 181 aa1.69□□□□□ -2.14
LRFN5-204ENST00000554171 RIF1Q5UIP0 2472 aaKnown RBP1.68□□□□□ -2.14
LRFN5-204ENST00000554171 KRTAP10-3P60369 221 aa1.68□□□□□ -2.14
LRFN5-204ENST00000554171 HMCN2Q8NDA2 5059 aa1.67□□□□□ -2.14
LRFN5-204ENST00000554171 EP300Q09472 2414 aaPredicted RBP1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms