RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 Q6ZVQ6 151 aa6.05□□□□□ -1.44
TMEM55B-205ENST00000554028 J3KT08 172 aa6.03□□□□□ -1.44
TMEM55B-205ENST00000554028 BPY2O14599 106 aa6.03□□□□□ -1.44
TMEM55B-205ENST00000554028 ASB16-AS1Q495Z4 193 aa6.03□□□□□ -1.44
TMEM55B-205ENST00000554028 LINC00643Q86TS7 51 aa6.03□□□□□ -1.44
TMEM55B-205ENST00000554028 HERC1Q15751 4861 aa6.03□□□□□ -1.44
TMEM55B-205ENST00000554028 SIGMAR1Q99720 223 aa6.02□□□□□ -1.45
TMEM55B-205ENST00000554028 ATP5EP2Q5VTU8 51 aa6.01□□□□□ -1.45
TMEM55B-205ENST00000554028 MT1HL1P0DM35 61 aa6□□□□□ -1.45
TMEM55B-205ENST00000554028 CDIP1Q9H305 208 aa6□□□□□ -1.45
TMEM55B-205ENST00000554028 NDUFB1O75438 58 aa5.99□□□□□ -1.45
TMEM55B-205ENST00000554028 IGKV4-1P06312 121 aa5.99□□□□□ -1.45
TMEM55B-205ENST00000554028 CXCL6P80162 114 aa5.99□□□□□ -1.45
TMEM55B-205ENST00000554028 LINC00472Q9H8W2 130 aa5.99□□□□□ -1.45
TMEM55B-205ENST00000554028 DEFB116Q30KQ4 102 aa5.98□□□□□ -1.45
TMEM55B-205ENST00000554028 IGKV3D-7A0A0C4DH55 119 aa5.97□□□□□ -1.45
TMEM55B-205ENST00000554028 C1orf195Q5TG92 126 aa5.97□□□□□ -1.45
TMEM55B-205ENST00000554028 FLG2Q5D862 2391 aaPredicted RBP5.97□□□□□ -1.45
TMEM55B-205ENST00000554028 PKHD1L1Q86WI1 4243 aa5.97□□□□□ -1.45
TMEM55B-205ENST00000554028 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
TMEM55B-205ENST00000554028 Q96NJ1 140 aa5.95□□□□□ -1.46
TMEM55B-205ENST00000554028 A8MWP4 228 aa5.94□□□□□ -1.46
TMEM55B-205ENST00000554028 HIST1H4AP62805 103 aaKnown RBP5.93□□□□□ -1.46
TMEM55B-205ENST00000554028 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
TMEM55B-205ENST00000554028 KRTAP9-3Q9BYQ3 159 aa5.93□□□□□ -1.46
TMEM55B-205ENST00000554028 DSCR10P59022 87 aa5.92□□□□□ -1.46
TMEM55B-205ENST00000554028 IMUPQ9GZP8 106 aa5.92□□□□□ -1.46
TMEM55B-205ENST00000554028 MT-ATP8P03928 68 aa5.91□□□□□ -1.46
TMEM55B-205ENST00000554028 FP248Q71RG6 208 aaPredicted RBP5.91□□□□□ -1.46
TMEM55B-205ENST00000554028 PRR15Q8IV56 129 aa5.91□□□□□ -1.46
TMEM55B-205ENST00000554028 IGHV6-1A0A0B4J1U7 121 aa5.9□□□□□ -1.46
TMEM55B-205ENST00000554028 A0A1B0GVX0 72 aa5.9□□□□□ -1.46
TMEM55B-205ENST00000554028 RETNLBQ9BQ08 111 aa5.9□□□□□ -1.46
TMEM55B-205ENST00000554028 UBR4Q5T4S7 5183 aa5.9□□□□□ -1.47
TMEM55B-205ENST00000554028 K7EQZ3 153 aa5.89□□□□□ -1.47
TMEM55B-205ENST00000554028 Q8N9L7 120 aa5.89□□□□□ -1.47
TMEM55B-205ENST00000554028 LRP1Q07954 4544 aaKnown RBP5.88□□□□□ -1.47
TMEM55B-205ENST00000554028 C8orf87E5RJ46 101 aa5.88□□□□□ -1.47
TMEM55B-205ENST00000554028 PRR4Q16378 134 aa5.87□□□□□ -1.47
TMEM55B-205ENST00000554028 FAT3Q8TDW7 4589 aa5.86□□□□□ -1.47
TMEM55B-205ENST00000554028 IGLV7-46A0A075B6I9 117 aa5.86□□□□□ -1.47
TMEM55B-205ENST00000554028 LINC00313P59037 77 aa5.86□□□□□ -1.47
TMEM55B-205ENST00000554028 DMBT1Q9UGM3 2413 aaPredicted RBP5.86□□□□□ -1.47
TMEM55B-205ENST00000554028 C8orf17Q9NRJ1 99 aa5.85□□□□□ -1.47
TMEM55B-205ENST00000554028 MYCBP2O75592 4640 aa5.85□□□□□ -1.47
TMEM55B-205ENST00000554028 HCG22E2RYF7 251 aa5.84□□□□□ -1.47
TMEM55B-205ENST00000554028 CASC2Q6XLA1 102 aa5.83□□□□□ -1.48
TMEM55B-205ENST00000554028 A0A087WVE0 104 aa5.82□□□□□ -1.48
TMEM55B-205ENST00000554028 hDV103S1A0JD37 113 aa5.82□□□□□ -1.48
TMEM55B-205ENST00000554028 SCGB1A1P11684 91 aa5.81□□□□□ -1.48
TMEM55B-205ENST00000554028 WFDC13Q8IUB5 93 aa5.81□□□□□ -1.48
TMEM55B-205ENST00000554028 TNXBP22105 4242 aa5.8□□□□□ -1.48
TMEM55B-205ENST00000554028 MMP24-AS1A0A0U1RRL7 71 aa5.8□□□□□ -1.48
TMEM55B-205ENST00000554028 C9orf92A6NGG3 77 aa5.8□□□□□ -1.48
TMEM55B-205ENST00000554028 TMEM254Q8TBM7 123 aa5.8□□□□□ -1.48
TMEM55B-205ENST00000554028 MRPL34Q9BQ48 92 aaKnown RBP5.79□□□□□ -1.48
TMEM55B-205ENST00000554028 FAM236AA0A1B0GUQ0 79 aa5.78□□□□□ -1.48
TMEM55B-205ENST00000554028 FAM236BA0A1B0GV22 79 aa5.78□□□□□ -1.48
TMEM55B-205ENST00000554028 NOTCH2NLQ7Z3S9 236 aa5.78□□□□□ -1.48
TMEM55B-205ENST00000554028 NDUFS5O43920 106 aa5.77□□□□□ -1.49
TMEM55B-205ENST00000554028 TPRXLQ17RH7 258 aa5.76□□□□□ -1.49
TMEM55B-205ENST00000554028 SVIPQ8NHG7 77 aa5.76□□□□□ -1.49
TMEM55B-205ENST00000554028 KRTAP13-3Q3SY46 172 aa5.75□□□□□ -1.49
TMEM55B-205ENST00000554028 SMIM20Q8N5G0 67 aa5.75□□□□□ -1.49
TMEM55B-205ENST00000554028 ATOX1O00244 68 aa5.74□□□□□ -1.49
TMEM55B-205ENST00000554028 TP53AIP1Q9HCN2 124 aa5.73□□□□□ -1.49
TMEM55B-205ENST00000554028 KRTAP16-1A8MUX0 517 aa5.72□□□□□ -1.49
TMEM55B-205ENST00000554028 Q8N9P0 234 aaPredicted RBP5.72□□□□□ -1.49
TMEM55B-205ENST00000554028 C20orf166-AS1Q96NR2 134 aa5.7□□□□□ -1.5
TMEM55B-205ENST00000554028 A8MUU9 505 aa5.69□□□□□ -1.5
TMEM55B-205ENST00000554028 UQCRQO14949 82 aa5.69□□□□□ -1.5
TMEM55B-205ENST00000554028 Q75L30 129 aa5.69□□□□□ -1.5
TMEM55B-205ENST00000554028 TRAV7A0A075B6U4 112 aa5.68□□□□□ -1.5
TMEM55B-205ENST00000554028 ATP11AUNQ6ZP68 121 aa5.68□□□□□ -1.5
TMEM55B-205ENST00000554028 RPL37P61927 97 aaKnown RBP5.66□□□□□ -1.5
TMEM55B-205ENST00000554028 ANAPC13Q9BS18 74 aa5.66□□□□□ -1.5
TMEM55B-205ENST00000554028 OCR1Q9BZK8 76 aa5.66□□□□□ -1.5
TMEM55B-205ENST00000554028 HMCN2Q8NDA2 5059 aa5.66□□□□□ -1.5
TMEM55B-205ENST00000554028 C5orf47Q569G3 176 aa5.65□□□□□ -1.5
TMEM55B-205ENST00000554028 SERP2Q8N6R1 65 aa5.65□□□□□ -1.5
TMEM55B-205ENST00000554028 MP68P56378 58 aa5.64□□□□□ -1.51
TMEM55B-205ENST00000554028 ZCCHC13Q8WW36 166 aaKnown RBP5.64□□□□□ -1.51
TMEM55B-205ENST00000554028 TRAV22A0A0B4J277 110 aa5.63□□□□□ -1.51
TMEM55B-205ENST00000554028 SEC61BP60468 96 aaKnown RBP5.62□□□□□ -1.51
TMEM55B-205ENST00000554028 H0Y9P7 68 aa5.61□□□□□ -1.51
TMEM55B-205ENST00000554028 H3BPC8 53 aa5.59□□□□□ -1.51
TMEM55B-205ENST00000554028 COX7CP15954 63 aa5.59□□□□□ -1.51
TMEM55B-205ENST00000554028 Q5W150 140 aa5.59□□□□□ -1.51
TMEM55B-205ENST00000554028 PCOTHQ58A44 107 aa5.57□□□□□ -1.52
TMEM55B-205ENST00000554028 C1orf64Q8NEQ6 169 aa5.57□□□□□ -1.52
TMEM55B-205ENST00000554028 LINC00208Q96KT6 92 aa5.57□□□□□ -1.52
TMEM55B-205ENST00000554028 LOC101927531A0A1B0GV80 90 aa5.56□□□□□ -1.52
TMEM55B-205ENST00000554028 C20orf197Q8N268 126 aa5.55□□□□□ -1.52
TMEM55B-205ENST00000554028 IGKV2D-30A0A075B6S6 120 aa5.54□□□□□ -1.52
TMEM55B-205ENST00000554028 IGKV2-30P06310 120 aa5.54□□□□□ -1.52
TMEM55B-205ENST00000554028 C7orf65Q6ZTY9 151 aa5.53□□□□□ -1.52
TMEM55B-205ENST00000554028 A0A0U1RQV1 116 aa5.51□□□□□ -1.53
TMEM55B-205ENST00000554028 SPINK7P58062 85 aa5.51□□□□□ -1.53
TMEM55B-205ENST00000554028 RNF213Q63HN8 5207 aa5.51□□□□□ -1.53
TMEM55B-205ENST00000554028 PCP4P48539 62 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms