RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 A0A1B0GVY2 172 aa4.34□□□□□ -1.71
ATXN3-221ENST00000553498 KLKP1Q107X0 134 aa4.34□□□□□ -1.71
ATXN3-221ENST00000553498 Q8N9L7 120 aa4.34□□□□□ -1.71
ATXN3-221ENST00000553498 OCR1Q9BZK8 76 aa4.34□□□□□ -1.71
ATXN3-221ENST00000553498 PKD1P98161 4303 aa4.34□□□□□ -1.72
ATXN3-221ENST00000553498 LRP1BQ9NZR2 4599 aa4.33□□□□□ -1.72
ATXN3-221ENST00000553498 A0A0G2JQZ4 141 aa4.33□□□□□ -1.72
ATXN3-221ENST00000553498 Q5XG85 94 aa4.33□□□□□ -1.72
ATXN3-221ENST00000553498 SPINK6Q6UWN8 80 aa4.33□□□□□ -1.72
ATXN3-221ENST00000553498 TMEM258P61165 79 aa4.32□□□□□ -1.72
ATXN3-221ENST00000553498 TGP01266 2768 aa4.32□□□□□ -1.72
ATXN3-221ENST00000553498 CDK2AP2O75956 126 aa4.31□□□□□ -1.72
ATXN3-221ENST00000553498 C5orf47Q569G3 176 aa4.31□□□□□ -1.72
ATXN3-221ENST00000553498 RYR2Q92736 4967 aa4.31□□□□□ -1.72
ATXN3-221ENST00000553498 KRTAP29-1A8MX34 341 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-221ENST00000553498 CASC2Q6XLA1 102 aa4.3□□□□□ -1.72
ATXN3-221ENST00000553498 C20orf197Q8N268 126 aa4.3□□□□□ -1.72
ATXN3-221ENST00000553498 Q96NJ1 140 aa4.3□□□□□ -1.72
ATXN3-221ENST00000553498 LIMD2Q9BT23 127 aa4.3□□□□□ -1.72
ATXN3-221ENST00000553498 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
ATXN3-221ENST00000553498 DEFB116Q30KQ4 102 aa4.29□□□□□ -1.72
ATXN3-221ENST00000553498 TMEM254Q8TBM7 123 aa4.29□□□□□ -1.72
ATXN3-221ENST00000553498 ANAPC11Q9NYG5 84 aa4.29□□□□□ -1.72
ATXN3-221ENST00000553498 DYNC1H1Q14204 4646 aaKnown RBP4.29□□□□□ -1.72
ATXN3-221ENST00000553498 A0A1B0GVX0 72 aa4.28□□□□□ -1.72
ATXN3-221ENST00000553498 H3BPC8 53 aa4.28□□□□□ -1.72
ATXN3-221ENST00000553498 KRTAP1-4P0C5Y4 121 aa4.28□□□□□ -1.72
ATXN3-221ENST00000553498 RPS29P62273 56 aaKnown RBP4.28□□□□□ -1.72
ATXN3-221ENST00000553498 TP53AIP1Q9HCN2 124 aa4.28□□□□□ -1.72
ATXN3-221ENST00000553498 SPINK1P00995 79 aa4.27□□□□□ -1.73
ATXN3-221ENST00000553498 ATP5EP56381 51 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-221ENST00000553498 SPAG11AQ6PDA7 123 aa4.27□□□□□ -1.73
ATXN3-221ENST00000553498 HRCT1Q6UXD1 115 aa4.27□□□□□ -1.73
ATXN3-221ENST00000553498 A0A087X002 238 aa4.26□□□□□ -1.73
ATXN3-221ENST00000553498 A0A0U1RQV1 116 aa4.26□□□□□ -1.73
ATXN3-221ENST00000553498 MMP24-AS1A0A0U1RRL7 71 aa4.26□□□□□ -1.73
ATXN3-221ENST00000553498 hDV103S1A0JD37 113 aa4.26□□□□□ -1.73
ATXN3-221ENST00000553498 C8orf87E5RJ46 101 aa4.26□□□□□ -1.73
ATXN3-221ENST00000553498 MP68P56378 58 aa4.26□□□□□ -1.73
ATXN3-221ENST00000553498 RPS28P62857 69 aaKnown RBP4.26□□□□□ -1.73
ATXN3-221ENST00000553498 KRTAP13-2Q52LG2 175 aa4.26□□□□□ -1.73
ATXN3-221ENST00000553498 C8orf17Q9NRJ1 99 aa4.26□□□□□ -1.73
ATXN3-221ENST00000553498 H7BZZ5 65 aa4.25□□□□□ -1.73
ATXN3-221ENST00000553498 WFDC13Q8IUB5 93 aa4.25□□□□□ -1.73
ATXN3-221ENST00000553498 TYMSOSQ8TAI1 123 aa4.25□□□□□ -1.73
ATXN3-221ENST00000553498 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
ATXN3-221ENST00000553498 Q8N9P0 234 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-221ENST00000553498 MRPL34Q9BQ48 92 aaKnown RBP4.23□□□□□ -1.73
ATXN3-221ENST00000553498 SRRM2Q9UQ35 2752 aaKnown RBP4.23□□□□□ -1.73
ATXN3-221ENST00000553498 IGHV6-1A0A0B4J1U7 121 aa4.22□□□□□ -1.73
ATXN3-221ENST00000553498 FAM236DA0A1B0GTK5 79 aa4.22□□□□□ -1.73
ATXN3-221ENST00000553498 FAM236CP0DP71 79 aa4.22□□□□□ -1.73
ATXN3-221ENST00000553498 ZCCHC13Q8WW36 166 aaKnown RBP4.22□□□□□ -1.73
ATXN3-221ENST00000553498 CYSTM1Q9H1C7 97 aa4.22□□□□□ -1.73
ATXN3-221ENST00000553498 SNURFQ9Y675 71 aa4.22□□□□□ -1.73
ATXN3-221ENST00000553498 APOBP04114 4563 aaKnown RBP4.22□□□□□ -1.73
ATXN3-221ENST00000553498 KMT2CQ8NEZ4 4911 aaKnown RBP4.21□□□□□ -1.74
ATXN3-221ENST00000553498 C1orf195Q5TG92 126 aa4.21□□□□□ -1.74
ATXN3-221ENST00000553498 TRAV22A0A0B4J277 110 aa4.2□□□□□ -1.74
ATXN3-221ENST00000553498 KRTAP10-4P60372 401 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-221ENST00000553498 LINC00304Q8N9R0 145 aa4.2□□□□□ -1.74
ATXN3-221ENST00000553498 PKHD1P08F94 4074 aa4.19□□□□□ -1.74
ATXN3-221ENST00000553498 H0Y9P7 68 aa4.19□□□□□ -1.74
ATXN3-221ENST00000553498 LINC00313P59037 77 aa4.19□□□□□ -1.74
ATXN3-221ENST00000553498 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
ATXN3-221ENST00000553498 SMR3BP02814 79 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-221ENST00000553498 SERP1Q9Y6X1 66 aa4.18□□□□□ -1.74
ATXN3-221ENST00000553498 SPANXA2-OT1Q8N9U9 137 aa4.17□□□□□ -1.74
ATXN3-221ENST00000553498 PRR26Q8N8Z3 221 aa4.16□□□□□ -1.74
ATXN3-221ENST00000553498 C1orf64Q8NEQ6 169 aa4.16□□□□□ -1.74
ATXN3-221ENST00000553498 LINC00208Q96KT6 92 aa4.16□□□□□ -1.74
ATXN3-221ENST00000553498 LOC101927531A0A1B0GV80 90 aa4.15□□□□□ -1.75
ATXN3-221ENST00000553498 NDUFS5O43920 106 aa4.15□□□□□ -1.75
ATXN3-221ENST00000553498 CYP4F30PQ9H0H9 118 aa4.15□□□□□ -1.75
ATXN3-221ENST00000553498 RYR3Q15413 4870 aa4.13□□□□□ -1.75
ATXN3-221ENST00000553498 FAT1Q14517 4588 aa4.13□□□□□ -1.75
ATXN3-221ENST00000553498 NOTCH2NLQ7Z3S9 236 aa4.13□□□□□ -1.75
ATXN3-221ENST00000553498 MPLKIPQ8TAP9 179 aa4.13□□□□□ -1.75
ATXN3-221ENST00000553498 IGKV2-30P06310 120 aa4.12□□□□□ -1.75
ATXN3-221ENST00000553498 Q5VSD8 79 aa4.11□□□□□ -1.75
ATXN3-221ENST00000553498 IGLV7-46A0A075B6I9 117 aa4.1□□□□□ -1.75
ATXN3-221ENST00000553498 KRTAP16-1A8MUX0 517 aa4.1□□□□□ -1.75
ATXN3-221ENST00000553498 KRTAP13-3Q3SY46 172 aa4.1□□□□□ -1.75
ATXN3-221ENST00000553498 SMIM26A0A096LP01 95 aa4.09□□□□□ -1.75
ATXN3-221ENST00000553498 PKHD1L1Q86WI1 4243 aa4.09□□□□□ -1.75
ATXN3-221ENST00000553498 RYR1P21817 5038 aa4.09□□□□□ -1.76
ATXN3-221ENST00000553498 KRTAP10-8P60410 259 aa4.08□□□□□ -1.76
ATXN3-221ENST00000553498 FP248Q71RG6 208 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-221ENST00000553498 Q5W150 140 aa4.06□□□□□ -1.76
ATXN3-221ENST00000553498 HSPG2P98160 4391 aa4.06□□□□□ -1.76
ATXN3-221ENST00000553498 OXTP01178 125 aa4.04□□□□□ -1.76
ATXN3-221ENST00000553498 C20orf166-AS1Q96NR2 134 aa4.04□□□□□ -1.76
ATXN3-221ENST00000553498 A8MUU9 505 aa4.03□□□□□ -1.76
ATXN3-221ENST00000553498 V9GYY9 64 aa4.03□□□□□ -1.76
ATXN3-221ENST00000553498 PCOTHQ58A44 107 aa4.02□□□□□ -1.77
ATXN3-221ENST00000553498 C7orf65Q6ZTY9 151 aa4□□□□□ -1.77
ATXN3-221ENST00000553498 Q75L30 129 aa4□□□□□ -1.77
ATXN3-221ENST00000553498 ACYP2P14621 99 aa3.99□□□□□ -1.77
ATXN3-221ENST00000553498 PRR4Q16378 134 aa3.99□□□□□ -1.77
ATXN3-221ENST00000553498 Q1T7F1 81 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms