RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 HRCT1Q6UXD1 115 aa2.71□□□□□ -1.98
ATXN3-220ENST00000553491 SMIM11BQ8TCY0 68 aa2.71□□□□□ -1.98
ATXN3-220ENST00000553491 RETNLBQ9BQ08 111 aa2.71□□□□□ -1.98
ATXN3-220ENST00000553491 TCL1BO95988 128 aa2.7□□□□□ -1.98
ATXN3-220ENST00000553491 ACYP1P07311 99 aa2.7□□□□□ -1.98
ATXN3-220ENST00000553491 ANKRD29Q8N6D5 301 aa2.7□□□□□ -1.98
ATXN3-220ENST00000553491 LAMTOR3Q9UHA4 124 aa2.7□□□□□ -1.98
ATXN3-220ENST00000553491 LRP1Q07954 4544 aaKnown RBP2.69□□□□□ -1.98
ATXN3-220ENST00000553491 SNCGO76070 127 aa2.69□□□□□ -1.98
ATXN3-220ENST00000553491 ELOF1P60002 83 aaKnown RBP2.69□□□□□ -1.98
ATXN3-220ENST00000553491 TRBV7-6A0A0J9YX20 115 aa2.68□□□□□ -1.98
ATXN3-220ENST00000553491 TEX49A0A1B0GTD5 131 aa2.68□□□□□ -1.98
ATXN3-220ENST00000553491 hADV29S1A0JD25 119 aa2.68□□□□□ -1.98
ATXN3-220ENST00000553491 C9JAW5 83 aa2.68□□□□□ -1.98
ATXN3-220ENST00000553491 LST1O00453 97 aa2.68□□□□□ -1.98
ATXN3-220ENST00000553491 SPAG11AQ6PDA7 123 aa2.68□□□□□ -1.98
ATXN3-220ENST00000553491 SSBP3-AS1Q7Z2R9 100 aa2.68□□□□□ -1.98
ATXN3-220ENST00000553491 IMUPQ9GZP8 106 aa2.68□□□□□ -1.98
ATXN3-220ENST00000553491 MYCBP2O75592 4640 aa2.68□□□□□ -1.98
ATXN3-220ENST00000553491 F8WEM9 126 aa2.67□□□□□ -1.98
ATXN3-220ENST00000553491 TRACP01848 142 aa2.67□□□□□ -1.98
ATXN3-220ENST00000553491 LINC00483Q53H64 154 aa2.67□□□□□ -1.98
ATXN3-220ENST00000553491 A0A0G2JQZ4 141 aa2.66□□□□□ -1.98
ATXN3-220ENST00000553491 SPINK1P00995 79 aa2.66□□□□□ -1.98
ATXN3-220ENST00000553491 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
ATXN3-220ENST00000553491 LINC00575Q6W349 94 aa2.66□□□□□ -1.98
ATXN3-220ENST00000553491 TRBV7-7A0A0K0K1E9 115 aa2.65□□□□□ -1.99
ATXN3-220ENST00000553491 H0YGX0 51 aa2.65□□□□□ -1.99
ATXN3-220ENST00000553491 MT-ATP8P03928 68 aa2.65□□□□□ -1.99
ATXN3-220ENST00000553491 Q6ZQY7 126 aa2.65□□□□□ -1.99
ATXN3-220ENST00000553491 ANAPC13Q9BS18 74 aa2.65□□□□□ -1.99
ATXN3-220ENST00000553491 FAT3Q8TDW7 4589 aa2.65□□□□□ -1.99
ATXN3-220ENST00000553491 A0A1B0GX51 115 aa2.64□□□□□ -1.99
ATXN3-220ENST00000553491 KRTAP13-3Q3SY46 172 aa2.64□□□□□ -1.99
ATXN3-220ENST00000553491 LINC00643Q86TS7 51 aa2.64□□□□□ -1.99
ATXN3-220ENST00000553491 CLEC2BQ92478 149 aa2.64□□□□□ -1.99
ATXN3-220ENST00000553491 HERC1Q15751 4861 aa2.64□□□□□ -1.99
ATXN3-220ENST00000553491 H3BQ85 93 aa2.63□□□□□ -1.99
ATXN3-220ENST00000553491 DNAL4O96015 105 aa2.63□□□□□ -1.99
ATXN3-220ENST00000553491 SPRR1BP22528 89 aa2.63□□□□□ -1.99
ATXN3-220ENST00000553491 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.63□□□□□ -1.99
ATXN3-220ENST00000553491 IGLV5-48A0A075B6I7 105 aa2.62□□□□□ -1.99
ATXN3-220ENST00000553491 LIMD2Q9BT23 127 aa2.62□□□□□ -1.99
ATXN3-220ENST00000553491 C9orf92A6NGG3 77 aa2.61□□□□□ -1.99
ATXN3-220ENST00000553491 BAALC-AS2P0C853 105 aa2.61□□□□□ -1.99
ATXN3-220ENST00000553491 OBSCN-AS1Q96MR7 158 aa2.61□□□□□ -1.99
ATXN3-220ENST00000553491 UBR4Q5T4S7 5183 aa2.61□□□□□ -1.99
ATXN3-220ENST00000553491 JMJD7-PLA2G4BH0Y9G9 81 aa2.6□□□□□ -1.99
ATXN3-220ENST00000553491 CD164Q04900 197 aa2.6□□□□□ -1.99
ATXN3-220ENST00000553491 Q6JHZ5 121 aa2.6□□□□□ -1.99
ATXN3-220ENST00000553491 IGFL1Q6UW32 110 aa2.6□□□□□ -1.99
ATXN3-220ENST00000553491 FP248Q71RG6 208 aaPredicted RBP2.6□□□□□ -1.99
ATXN3-220ENST00000553491 ORMDL1Q9P0S3 153 aa2.6□□□□□ -1.99
ATXN3-220ENST00000553491 TNXBP22105 4242 aa2.6□□□□□ -1.99
ATXN3-220ENST00000553491 ATOX1O00244 68 aa2.59□□□□□ -1.99
ATXN3-220ENST00000553491 UQCRQO14949 82 aa2.59□□□□□ -1.99
ATXN3-220ENST00000553491 ATP5EP2Q5VTU8 51 aa2.59□□□□□ -1.99
ATXN3-220ENST00000553491 TMEM256-PLSCR3K7ERE1 68 aa2.58□□□□□ -2
ATXN3-220ENST00000553491 RPS29P62273 56 aaKnown RBP2.58□□□□□ -2
ATXN3-220ENST00000553491 CAMK2N1Q7Z7J9 78 aa2.58□□□□□ -2
ATXN3-220ENST00000553491 PDE6GP18545 87 aa2.57□□□□□ -2
ATXN3-220ENST00000553491 HIST1H4AP62805 103 aaKnown RBP2.57□□□□□ -2
ATXN3-220ENST00000553491 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
ATXN3-220ENST00000553491 TPRXLQ17RH7 258 aa2.57□□□□□ -2
ATXN3-220ENST00000553491 C1orf195Q5TG92 126 aa2.57□□□□□ -2
ATXN3-220ENST00000553491 FAM236AA0A1B0GUQ0 79 aa2.56□□□□□ -2
ATXN3-220ENST00000553491 FAM236BA0A1B0GV22 79 aa2.56□□□□□ -2
ATXN3-220ENST00000553491 CCDC179H3BU77 68 aa2.56□□□□□ -2
ATXN3-220ENST00000553491 CCKP06307 115 aa2.56□□□□□ -2
ATXN3-220ENST00000553491 COX7CP15954 63 aa2.56□□□□□ -2
ATXN3-220ENST00000553491 A0A087WSZ3 146 aa2.55□□□□□ -2
ATXN3-220ENST00000553491 RBM3P98179 157 aaKnown RBP2.55□□□□□ -2
ATXN3-220ENST00000553491 DEFB116Q30KQ4 102 aa2.55□□□□□ -2
ATXN3-220ENST00000553491 SMIM20Q8N5G0 67 aa2.55□□□□□ -2
ATXN3-220ENST00000553491 DSCR8Q96T75 97 aa2.55□□□□□ -2
ATXN3-220ENST00000553491 SS18L2Q9UHA2 77 aa2.55□□□□□ -2
ATXN3-220ENST00000553491 LPAP08519 4548 aa2.54□□□□□ -2
ATXN3-220ENST00000553491 LOC110117498A0A087WWA1 95 aa2.54□□□□□ -2
ATXN3-220ENST00000553491 SERP2Q8N6R1 65 aa2.54□□□□□ -2
ATXN3-220ENST00000553491 Q96NJ1 140 aa2.54□□□□□ -2
ATXN3-220ENST00000553491 UBL5Q9BZL1 73 aa2.54□□□□□ -2
ATXN3-220ENST00000553491 A0A0U1RQV1 116 aa2.53□□□□□ -2
ATXN3-220ENST00000553491 A0A1B0GW54 56 aa2.53□□□□□ -2
ATXN3-220ENST00000553491 A0A1W2PNM2 257 aa2.53□□□□□ -2
ATXN3-220ENST00000553491 IGKV4-1P06312 121 aa2.53□□□□□ -2
ATXN3-220ENST00000553491 TMEM258P61165 79 aa2.53□□□□□ -2
ATXN3-220ENST00000553491 PCOTHQ58A44 107 aa2.53□□□□□ -2
ATXN3-220ENST00000553491 Q5XG85 94 aa2.53□□□□□ -2
ATXN3-220ENST00000553491 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
ATXN3-220ENST00000553491 Q8N9L7 120 aa2.53□□□□□ -2
ATXN3-220ENST00000553491 J3KT08 172 aa2.52□□□□□ -2.01
ATXN3-220ENST00000553491 C14orf132Q9NPU4 83 aa2.52□□□□□ -2.01
ATXN3-220ENST00000553491 LINC00846Q9NV44 126 aa2.52□□□□□ -2.01
ATXN3-220ENST00000553491 TRBV7-4A0A0J9YYF1 115 aa2.51□□□□□ -2.01
ATXN3-220ENST00000553491 ASB16-AS1Q495Z4 193 aa2.51□□□□□ -2.01
ATXN3-220ENST00000553491 ATP11AUNQ6ZP68 121 aa2.51□□□□□ -2.01
ATXN3-220ENST00000553491 IGHV6-1A0A0B4J1U7 121 aa2.5□□□□□ -2.01
ATXN3-220ENST00000553491 NDUFC1O43677 76 aa2.5□□□□□ -2.01
ATXN3-220ENST00000553491 LINC00313P59037 77 aa2.5□□□□□ -2.01
ATXN3-220ENST00000553491 Q6ZQT0 140 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms