RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 COX6B2Q6YFQ2 88 aa8.02□□□□□ -1.13
SHMT2-204ENST00000553324 C8orf87E5RJ46 101 aa8.01□□□□□ -1.13
SHMT2-204ENST00000553324 A0A1B0GVX0 72 aa8□□□□□ -1.13
SHMT2-204ENST00000553324 A0A1W2PPM0 123 aa8□□□□□ -1.13
SHMT2-204ENST00000553324 TAX1BP3O14907 124 aa8□□□□□ -1.13
SHMT2-204ENST00000553324 NDUFB1O75438 58 aa7.99□□□□□ -1.13
SHMT2-204ENST00000553324 KRTAP16-1A8MUX0 517 aa7.98□□□□□ -1.13
SHMT2-204ENST00000553324 H3BT86 120 aa7.98□□□□□ -1.13
SHMT2-204ENST00000553324 MT1HP80294 61 aa7.98□□□□□ -1.13
SHMT2-204ENST00000553324 C14orf132Q9NPU4 83 aa7.98□□□□□ -1.13
SHMT2-204ENST00000553324 NOTCH2NLQ7Z3S9 236 aa7.97□□□□□ -1.13
SHMT2-204ENST00000553324 KRTAP9-2Q9BYQ4 174 aa7.96□□□□□ -1.14
SHMT2-204ENST00000553324 NREPQ16612 68 aa7.93□□□□□ -1.14
SHMT2-204ENST00000553324 A8MWP4 228 aa7.91□□□□□ -1.14
SHMT2-204ENST00000553324 M0R2T5 61 aa7.91□□□□□ -1.14
SHMT2-204ENST00000553324 FLGP20930 4061 aaPredicted RBP7.9□□□□□ -1.14
SHMT2-204ENST00000553324 SPCS1Q9Y6A9 102 aa7.9□□□□□ -1.14
SHMT2-204ENST00000553324 A0A1B0GV90 55 aa7.87□□□□□ -1.15
SHMT2-204ENST00000553324 MTURNQ8N3F0 131 aa7.87□□□□□ -1.15
SHMT2-204ENST00000553324 IGKV3D-7A0A0C4DH55 119 aa7.85□□□□□ -1.15
SHMT2-204ENST00000553324 Q8N9P0 234 aaPredicted RBP7.85□□□□□ -1.15
SHMT2-204ENST00000553324 C8orf17Q9NRJ1 99 aa7.85□□□□□ -1.15
SHMT2-204ENST00000553324 PRR15Q8IV56 129 aa7.84□□□□□ -1.15
SHMT2-204ENST00000553324 LCE2DQ5TA82 110 aaPredicted RBP7.83□□□□□ -1.16
SHMT2-204ENST00000553324 KRTAP10-6P60371 365 aaPredicted RBP7.82□□□□□ -1.16
SHMT2-204ENST00000553324 ZCCHC13Q8WW36 166 aaKnown RBP7.82□□□□□ -1.16
SHMT2-204ENST00000553324 RBM12B-AS1Q9P1G2 102 aa7.82□□□□□ -1.16
SHMT2-204ENST00000553324 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
SHMT2-204ENST00000553324 Q6ZVQ6 151 aa7.81□□□□□ -1.16
SHMT2-204ENST00000553324 FAM236DA0A1B0GTK5 79 aa7.78□□□□□ -1.16
SHMT2-204ENST00000553324 BPY2O14599 106 aa7.78□□□□□ -1.16
SHMT2-204ENST00000553324 FAM236CP0DP71 79 aa7.78□□□□□ -1.16
SHMT2-204ENST00000553324 K7EP34 96 aa7.77□□□□□ -1.17
SHMT2-204ENST00000553324 SMCPP49901 116 aaPredicted RBP7.77□□□□□ -1.17
SHMT2-204ENST00000553324 GTF2H5Q6ZYL4 71 aa7.76□□□□□ -1.17
SHMT2-204ENST00000553324 HRES1P13985 223 aa7.75□□□□□ -1.17
SHMT2-204ENST00000553324 MPLKIPQ8TAP9 179 aa7.75□□□□□ -1.17
SHMT2-204ENST00000553324 TMEM254Q8TBM7 123 aa7.75□□□□□ -1.17
SHMT2-204ENST00000553324 MRPL34Q9BQ48 92 aaKnown RBP7.75□□□□□ -1.17
SHMT2-204ENST00000553324 SPINK7P58062 85 aa7.74□□□□□ -1.17
SHMT2-204ENST00000553324 PRO0461Q9UI25 63 aa7.74□□□□□ -1.17
SHMT2-204ENST00000553324 MMP24-AS1A0A0U1RRL7 71 aa7.73□□□□□ -1.17
SHMT2-204ENST00000553324 hDV103S1A0JD37 113 aa7.73□□□□□ -1.17
SHMT2-204ENST00000553324 K7EQZ3 153 aa7.73□□□□□ -1.17
SHMT2-204ENST00000553324 UBL5Q9BZL1 73 aa7.7□□□□□ -1.18
SHMT2-204ENST00000553324 F8W1H4 67 aa7.69□□□□□ -1.18
SHMT2-204ENST00000553324 NDUFS5O43920 106 aa7.68□□□□□ -1.18
SHMT2-204ENST00000553324 KRTAP9-6A0A140TA67 174 aa7.66□□□□□ -1.18
SHMT2-204ENST00000553324 LINC00846Q9NV44 126 aa7.66□□□□□ -1.18
SHMT2-204ENST00000553324 CASC2Q6XLA1 102 aa7.63□□□□□ -1.19
SHMT2-204ENST00000553324 FSIP2Q5CZC0 6907 aa7.62□□□□□ -1.19
SHMT2-204ENST00000553324 Q8N9L7 120 aa7.62□□□□□ -1.19
SHMT2-204ENST00000553324 WFDC13Q8IUB5 93 aa7.61□□□□□ -1.19
SHMT2-204ENST00000553324 ETDBQ3ZM63 59 aa7.59□□□□□ -1.19
SHMT2-204ENST00000553324 KRTAP9-8Q9BYQ0 159 aa7.58□□□□□ -1.2
SHMT2-204ENST00000553324 HCG22E2RYF7 251 aa7.57□□□□□ -1.2
SHMT2-204ENST00000553324 CXCL6P80162 114 aa7.56□□□□□ -1.2
SHMT2-204ENST00000553324 CRCT1Q9UGL9 99 aa7.56□□□□□ -1.2
SHMT2-204ENST00000553324 Q5W150 140 aa7.53□□□□□ -1.2
SHMT2-204ENST00000553324 C7orf65Q6ZTY9 151 aa7.53□□□□□ -1.2
SHMT2-204ENST00000553324 IGKV2D-30A0A075B6S6 120 aa7.52□□□□□ -1.21
SHMT2-204ENST00000553324 IGKV2-30P06310 120 aa7.52□□□□□ -1.21
SHMT2-204ENST00000553324 ACYP1P07311 99 aa7.5□□□□□ -1.21
SHMT2-204ENST00000553324 H1FX-AS1Q4G0G2 97 aa7.47□□□□□ -1.21
SHMT2-204ENST00000553324 TP53AIP1Q9HCN2 124 aa7.47□□□□□ -1.21
SHMT2-204ENST00000553324 MT2AP02795 61 aa7.46□□□□□ -1.22
SHMT2-204ENST00000553324 K7ERU9 68 aa7.43□□□□□ -1.22
SHMT2-204ENST00000553324 FAM240AA0A1B0GVK7 77 aa7.42□□□□□ -1.22
SHMT2-204ENST00000553324 KRTAP10-10P60014 251 aa7.42□□□□□ -1.22
SHMT2-204ENST00000553324 J3QR89 54 aa7.41□□□□□ -1.22
SHMT2-204ENST00000553324 MT1FP04733 61 aa7.39□□□□□ -1.23
SHMT2-204ENST00000553324 ATP5EP2Q5VTU8 51 aa7.38□□□□□ -1.23
SHMT2-204ENST00000553324 C4orf26Q17RF5 130 aa7.37□□□□□ -1.23
SHMT2-204ENST00000553324 KRTAP9-3Q9BYQ3 159 aa7.34□□□□□ -1.23
SHMT2-204ENST00000553324 USH2AO75445 5202 aa7.31□□□□□ -1.24
SHMT2-204ENST00000553324 HIST1H4AP62805 103 aaKnown RBP7.3□□□□□ -1.24
SHMT2-204ENST00000553324 LINC00643Q86TS7 51 aa7.29□□□□□ -1.24
SHMT2-204ENST00000553324 C1orf64Q8NEQ6 169 aa7.28□□□□□ -1.24
SHMT2-204ENST00000553324 TRAV22A0A0B4J277 110 aa7.26□□□□□ -1.25
SHMT2-204ENST00000553324 LCE2BO14633 110 aa7.25□□□□□ -1.25
SHMT2-204ENST00000553324 CYP4F30PQ9H0H9 118 aa7.25□□□□□ -1.25
SHMT2-204ENST00000553324 LOC101927531A0A1B0GV80 90 aa7.24□□□□□ -1.25
SHMT2-204ENST00000553324 UQCRQO14949 82 aa7.24□□□□□ -1.25
SHMT2-204ENST00000553324 KRTAP3-1Q9BYR8 98 aa7.24□□□□□ -1.25
SHMT2-204ENST00000553324 S4R3F8 94 aa7.22□□□□□ -1.25
SHMT2-204ENST00000553324 ATOX1O00244 68 aa7.21□□□□□ -1.26
SHMT2-204ENST00000553324 SSPOA2VEC9 5147 aa7.2□□□□□ -1.26
SHMT2-204ENST00000553324 CSAG1Q6PB30 78 aa7.19□□□□□ -1.26
SHMT2-204ENST00000553324 C5orf47Q569G3 176 aa7.18□□□□□ -1.26
SHMT2-204ENST00000553324 A0A087WVE0 104 aa7.16□□□□□ -1.26
SHMT2-204ENST00000553324 H0Y9P7 68 aa7.16□□□□□ -1.26
SHMT2-204ENST00000553324 LCA10Q71F78 164 aa7.14□□□□□ -1.27
SHMT2-204ENST00000553324 MT-ATP8P03928 68 aa7.1□□□□□ -1.27
SHMT2-204ENST00000553324 KRTAP19-1Q8IUB9 90 aa7.1□□□□□ -1.27
SHMT2-204ENST00000553324 IMUPQ9GZP8 106 aa7.1□□□□□ -1.27
SHMT2-204ENST00000553324 FAM236AA0A1B0GUQ0 79 aa7.09□□□□□ -1.27
SHMT2-204ENST00000553324 FAM236BA0A1B0GV22 79 aa7.09□□□□□ -1.27
SHMT2-204ENST00000553324 MP68P56378 58 aa7.09□□□□□ -1.27
SHMT2-204ENST00000553324 FCGBPQ9Y6R7 5405 aaPredicted RBP7.06□□□□□ -1.28
SHMT2-204ENST00000553324 LINC00208Q96KT6 92 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms