RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055		A8MTW9	85 aa		3.82	□□□□□ -1.8
PFKM-231	ENST00000553055	BCE1	O60756	84 aa		3.82	□□□□□ -1.8
PFKM-231	ENST00000553055	SPINK13	Q1W4C9	94 aa		3.82	□□□□□ -1.8
PFKM-231	ENST00000553055	DEFB104A	Q8WTQ1	72 aa		3.82	□□□□□ -1.8
PFKM-231	ENST00000553055	ZNF625	Q96I27	306 aa	Predicted RBP	3.82	□□□□□ -1.8
PFKM-231	ENST00000553055	OBSCN-AS1	Q96MR7	158 aa		3.82	□□□□□ -1.8
PFKM-231	ENST00000553055	KRTAP9-8	Q9BYQ0	159 aa		3.82	□□□□□ -1.8
PFKM-231	ENST00000553055	CDKN2A-AS1	Q9UH64	79 aa		3.82	□□□□□ -1.8
PFKM-231	ENST00000553055	C22orf24	Q9Y442	160 aa		3.82	□□□□□ -1.8
PFKM-231	ENST00000553055	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.81	□□□□□ -1.8
PFKM-231	ENST00000553055	TRBV10-1	A0A0K0K1A3	114 aa		3.81	□□□□□ -1.8
PFKM-231	ENST00000553055	TRBV10-3	A0A0K0K1G6	114 aa		3.81	□□□□□ -1.8
PFKM-231	ENST00000553055	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.81	□□□□□ -1.8
PFKM-231	ENST00000553055	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.8	□□□□□ -1.8
PFKM-231	ENST00000553055	SPTSSB	Q8NFR3	76 aa		3.8	□□□□□ -1.8
PFKM-231	ENST00000553055	DMAC1	Q96GE9	116 aa		3.8	□□□□□ -1.8
PFKM-231	ENST00000553055	TRBV6-4	A0A1B0GX49	114 aa		3.79	□□□□□ -1.8
PFKM-231	ENST00000553055		H3BUX3	64 aa		3.79	□□□□□ -1.8
PFKM-231	ENST00000553055	CSAG1	Q6PB30	78 aa		3.79	□□□□□ -1.8
PFKM-231	ENST00000553055	FAT2	Q9NYQ8	4349 aa		3.79	□□□□□ -1.8
PFKM-231	ENST00000553055	IGKV3D-7	A0A0C4DH55	119 aa		3.78	□□□□□ -1.8
PFKM-231	ENST00000553055	CCK	P06307	115 aa		3.78	□□□□□ -1.8
PFKM-231	ENST00000553055	COX7B2	Q8TF08	81 aa		3.78	□□□□□ -1.8
PFKM-231	ENST00000553055	HMCN2	Q8NDA2	5059 aa		3.77	□□□□□ -1.81
PFKM-231	ENST00000553055	COX6A2	Q02221	97 aa		3.77	□□□□□ -1.81
PFKM-231	ENST00000553055	KRTAP5-3	Q6L8H2	238 aa		3.77	□□□□□ -1.81
PFKM-231	ENST00000553055	SMIM11B	Q8TCY0	68 aa		3.77	□□□□□ -1.81
PFKM-231	ENST00000553055	LINC00846	Q9NV44	126 aa		3.77	□□□□□ -1.81
PFKM-231	ENST00000553055	DNAH2	Q9P225	4427 aa		3.76	□□□□□ -1.81
PFKM-231	ENST00000553055	KRTAP10-12	P60413	245 aa		3.76	□□□□□ -1.81
PFKM-231	ENST00000553055	UBL5	Q9BZL1	73 aa		3.76	□□□□□ -1.81
PFKM-231	ENST00000553055	CYP4F30P	Q9H0H9	118 aa		3.76	□□□□□ -1.81
PFKM-231	ENST00000553055	CDC42SE2	Q9NRR3	84 aa		3.76	□□□□□ -1.81
PFKM-231	ENST00000553055	CDC42SE1	Q9NRR8	79 aa		3.76	□□□□□ -1.81
PFKM-231	ENST00000553055	VPS13D	Q5THJ4	4388 aa		3.76	□□□□□ -1.81
PFKM-231	ENST00000553055	RNF213	Q63HN8	5207 aa		3.76	□□□□□ -1.81
PFKM-231	ENST00000553055	FLG2	Q5D862	2391 aa	Predicted RBP	3.75	□□□□□ -1.81
PFKM-231	ENST00000553055	NUPR2	A6NF83	97 aa		3.75	□□□□□ -1.81
PFKM-231	ENST00000553055	HCG22	E2RYF7	251 aa		3.75	□□□□□ -1.81
PFKM-231	ENST00000553055	NDUFC1	O43677	76 aa		3.75	□□□□□ -1.81
PFKM-231	ENST00000553055	LINC00158	P58513	81 aa		3.75	□□□□□ -1.81
PFKM-231	ENST00000553055	DEFB131A	P59861	70 aa		3.75	□□□□□ -1.81
PFKM-231	ENST00000553055	COA5	Q86WW8	74 aa		3.75	□□□□□ -1.81
PFKM-231	ENST00000553055	MYCBP2	O75592	4640 aa		3.75	□□□□□ -1.81
PFKM-231	ENST00000553055		A0A087WVE0	104 aa		3.74	□□□□□ -1.81
PFKM-231	ENST00000553055	HTN1	P15515	57 aa		3.74	□□□□□ -1.81
PFKM-231	ENST00000553055	CCL18	P55774	89 aa		3.74	□□□□□ -1.81
PFKM-231	ENST00000553055	CYSTM1	Q9H1C7	97 aa		3.74	□□□□□ -1.81
PFKM-231	ENST00000553055	APOB	P04114	4563 aa	Known RBP	3.74	□□□□□ -1.81
PFKM-231	ENST00000553055	NCR3	O14931	201 aa		3.73	□□□□□ -1.81
PFKM-231	ENST00000553055	PDE6G	P18545	87 aa		3.73	□□□□□ -1.81
PFKM-231	ENST00000553055	PKD1	P98161	4303 aa		3.72	□□□□□ -1.81
PFKM-231	ENST00000553055	LOC110117498	A0A087WWA1	95 aa		3.72	□□□□□ -1.81
PFKM-231	ENST00000553055	TRGV1	A0A0A0MS02	117 aa		3.72	□□□□□ -1.81
PFKM-231	ENST00000553055	KLKP1	Q107X0	134 aa		3.72	□□□□□ -1.81
PFKM-231	ENST00000553055	LCE3C	Q5T5A8	94 aa		3.72	□□□□□ -1.81
PFKM-231	ENST00000553055	C10orf99	Q6UWK7	81 aa		3.72	□□□□□ -1.81
PFKM-231	ENST00000553055	TOMM7	Q9P0U1	55 aa		3.72	□□□□□ -1.81
PFKM-231	ENST00000553055	SORL1	Q92673	2214 aa		3.71	□□□□□ -1.82
PFKM-231	ENST00000553055	TRAV23DV6	A0A075B6W5	121 aa		3.71	□□□□□ -1.82
PFKM-231	ENST00000553055		Q8IZM0	81 aa		3.71	□□□□□ -1.82
PFKM-231	ENST00000553055	C20orf197	Q8N268	126 aa		3.71	□□□□□ -1.82
PFKM-231	ENST00000553055	COX17	Q14061	63 aa		3.7	□□□□□ -1.82
PFKM-231	ENST00000553055	ENHO	Q6UWT2	76 aa		3.7	□□□□□ -1.82
PFKM-231	ENST00000553055	DNAH17	Q9UFH2	4485 aa		3.7	□□□□□ -1.82
PFKM-231	ENST00000553055	MUC2	Q02817	5179 aa		3.69	□□□□□ -1.82
PFKM-231	ENST00000553055		H7BZZ5	65 aa		3.69	□□□□□ -1.82
PFKM-231	ENST00000553055	LIMD2	Q9BT23	127 aa		3.69	□□□□□ -1.82
PFKM-231	ENST00000553055	DNAH6	Q9C0G6	4158 aa		3.67	□□□□□ -1.82
PFKM-231	ENST00000553055	DEFB114	Q30KQ6	69 aa		3.67	□□□□□ -1.82
PFKM-231	ENST00000553055	WFDC10A	Q9H1F0	79 aa		3.67	□□□□□ -1.82
PFKM-231	ENST00000553055	LINC00474	Q9P2X8	69 aa		3.67	□□□□□ -1.82
PFKM-231	ENST00000553055	LRP1B	Q9NZR2	4599 aa		3.66	□□□□□ -1.82
PFKM-231	ENST00000553055	TRGV2	A0A075B6R0	118 aa		3.66	□□□□□ -1.82
PFKM-231	ENST00000553055	IGKV3OR2-268	A0A0C4DH90	116 aa		3.66	□□□□□ -1.82
PFKM-231	ENST00000553055	LINC00959	A0A1B0GUT2	108 aa		3.66	□□□□□ -1.82
PFKM-231	ENST00000553055		F8WEM9	126 aa		3.66	□□□□□ -1.82
PFKM-231	ENST00000553055	LINC00575	Q6W349	94 aa		3.66	□□□□□ -1.82
PFKM-231	ENST00000553055	SNURF	Q9Y675	71 aa		3.66	□□□□□ -1.82
PFKM-231	ENST00000553055	TRBV7-4	A0A0J9YYF1	115 aa		3.65	□□□□□ -1.83
PFKM-231	ENST00000553055	DEFB136	Q30KP8	78 aa		3.65	□□□□□ -1.83
PFKM-231	ENST00000553055	NOP10	Q9NPE3	64 aa	Known RBP	3.65	□□□□□ -1.83
PFKM-231	ENST00000553055		M0R2N4	97 aa		3.64	□□□□□ -1.83
PFKM-231	ENST00000553055	INE1	O15225	51 aa		3.64	□□□□□ -1.83
PFKM-231	ENST00000553055	HAMP	P81172	84 aa		3.64	□□□□□ -1.83
PFKM-231	ENST00000553055	NREP	Q16612	68 aa		3.64	□□□□□ -1.83
PFKM-231	ENST00000553055		Q5VSD8	79 aa		3.63	□□□□□ -1.83
PFKM-231	ENST00000553055	DNAH5	Q8TE73	4624 aa		3.61	□□□□□ -1.83
PFKM-231	ENST00000553055	FAT4	Q6V0I7	4981 aa		3.61	□□□□□ -1.83
PFKM-231	ENST00000553055	GVQW2	A0A096LPI5	108 aa	Predicted RBP	3.61	□□□□□ -1.83
PFKM-231	ENST00000553055	COX7B	P24311	80 aa		3.61	□□□□□ -1.83
PFKM-231	ENST00000553055		Q6ZRN7	208 aa	Predicted RBP	3.61	□□□□□ -1.83
PFKM-231	ENST00000553055	SPRR5	A0A1B0GTR4	108 aa		3.6	□□□□□ -1.83
PFKM-231	ENST00000553055	SPAG11B	Q08648	103 aa		3.6	□□□□□ -1.83
PFKM-231	ENST00000553055		Q6ZQY7	126 aa		3.6	□□□□□ -1.83
PFKM-231	ENST00000553055	CRCT1	Q9UGL9	99 aa		3.6	□□□□□ -1.83
PFKM-231	ENST00000553055	FAT1	Q14517	4588 aa		3.58	□□□□□ -1.84
PFKM-231	ENST00000553055	ELOF1	P60002	83 aa	Known RBP	3.58	□□□□□ -1.84
PFKM-231	ENST00000553055	PRO0255	Q9UI72	69 aa		3.58	□□□□□ -1.84
PFKM-231	ENST00000553055	APLN	Q9ULZ1	77 aa		3.58	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms