RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 IGLV8-61A0A075B6I0 122 aa6.52□□□□□ -1.37
CKAP4-202ENST00000552828 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
CKAP4-202ENST00000552828 A0A0G2JQZ4 141 aa6.51□□□□□ -1.37
CKAP4-202ENST00000552828 FAM236AA0A1B0GUQ0 79 aa6.5□□□□□ -1.37
CKAP4-202ENST00000552828 FAM236BA0A1B0GV22 79 aa6.5□□□□□ -1.37
CKAP4-202ENST00000552828 HIST1H4AP62805 103 aaKnown RBP6.5□□□□□ -1.37
CKAP4-202ENST00000552828 ATP5EP2Q5VTU8 51 aa6.5□□□□□ -1.37
CKAP4-202ENST00000552828 LOC110117498A0A087WWA1 95 aa6.49□□□□□ -1.37
CKAP4-202ENST00000552828 CCDC179H3BU77 68 aa6.49□□□□□ -1.37
CKAP4-202ENST00000552828 PDE6GP18545 87 aa6.49□□□□□ -1.37
CKAP4-202ENST00000552828 LINC00846Q9NV44 126 aa6.49□□□□□ -1.37
CKAP4-202ENST00000552828 Q5XG85 94 aa6.48□□□□□ -1.37
CKAP4-202ENST00000552828 IGFL1Q6UW32 110 aa6.48□□□□□ -1.37
CKAP4-202ENST00000552828 ATOX1O00244 68 aa6.47□□□□□ -1.37
CKAP4-202ENST00000552828 MT1HP80294 61 aa6.47□□□□□ -1.37
CKAP4-202ENST00000552828 UQCRQO14949 82 aa6.45□□□□□ -1.38
CKAP4-202ENST00000552828 RBM3P98179 157 aaKnown RBP6.45□□□□□ -1.38
CKAP4-202ENST00000552828 Q6ZQT0 140 aa6.44□□□□□ -1.38
CKAP4-202ENST00000552828 PCOTHQ58A44 107 aa6.43□□□□□ -1.38
CKAP4-202ENST00000552828 UBL5Q9BZL1 73 aa6.43□□□□□ -1.38
CKAP4-202ENST00000552828 COX7CP15954 63 aa6.42□□□□□ -1.38
CKAP4-202ENST00000552828 IGKV3D-7A0A0C4DH55 119 aa6.41□□□□□ -1.38
CKAP4-202ENST00000552828 LORP23490 312 aaPredicted RBP6.41□□□□□ -1.38
CKAP4-202ENST00000552828 C1orf195Q5TG92 126 aa6.41□□□□□ -1.38
CKAP4-202ENST00000552828 DSCR8Q96T75 97 aa6.41□□□□□ -1.38
CKAP4-202ENST00000552828 SS18L2Q9UHA2 77 aa6.4□□□□□ -1.38
CKAP4-202ENST00000552828 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
CKAP4-202ENST00000552828 C9orf92A6NGG3 77 aa6.38□□□□□ -1.39
CKAP4-202ENST00000552828 KRTAP10-6P60371 365 aaPredicted RBP6.38□□□□□ -1.39
CKAP4-202ENST00000552828 SERP2Q8N6R1 65 aa6.38□□□□□ -1.39
CKAP4-202ENST00000552828 FLGP20930 4061 aaPredicted RBP6.37□□□□□ -1.39
CKAP4-202ENST00000552828 CXCL6P80162 114 aa6.36□□□□□ -1.39
CKAP4-202ENST00000552828 A0A087WSZ3 146 aa6.35□□□□□ -1.39
CKAP4-202ENST00000552828 A0A1W2PNM2 257 aa6.35□□□□□ -1.39
CKAP4-202ENST00000552828 A0A087WVE0 104 aa6.34□□□□□ -1.39
CKAP4-202ENST00000552828 Q6ZVQ6 151 aa6.34□□□□□ -1.39
CKAP4-202ENST00000552828 A0A1B0GW54 56 aa6.33□□□□□ -1.4
CKAP4-202ENST00000552828 SMIM20Q8N5G0 67 aa6.33□□□□□ -1.4
CKAP4-202ENST00000552828 RPL37P61927 97 aaKnown RBP6.3□□□□□ -1.4
CKAP4-202ENST00000552828 M0R2T5 61 aa6.29□□□□□ -1.4
CKAP4-202ENST00000552828 TRAV7A0A075B6U4 112 aa6.28□□□□□ -1.4
CKAP4-202ENST00000552828 TMEM258P61165 79 aa6.28□□□□□ -1.4
CKAP4-202ENST00000552828 RPS28P62857 69 aaKnown RBP6.27□□□□□ -1.41
CKAP4-202ENST00000552828 H3BS24 57 aa6.26□□□□□ -1.41
CKAP4-202ENST00000552828 Q96NJ1 140 aa6.26□□□□□ -1.41
CKAP4-202ENST00000552828 COX6B2Q6YFQ2 88 aa6.25□□□□□ -1.41
CKAP4-202ENST00000552828 J3KT08 172 aa6.23□□□□□ -1.41
CKAP4-202ENST00000552828 IGKV4-1P06312 121 aa6.23□□□□□ -1.41
CKAP4-202ENST00000552828 NREPQ16612 68 aa6.23□□□□□ -1.41
CKAP4-202ENST00000552828 LINC00472Q9H8W2 130 aa6.23□□□□□ -1.41
CKAP4-202ENST00000552828 DEFB116Q30KQ4 102 aa6.21□□□□□ -1.42
CKAP4-202ENST00000552828 KLKP1Q107X0 134 aa6.2□□□□□ -1.42
CKAP4-202ENST00000552828 CYSTM1Q9H1C7 97 aa6.2□□□□□ -1.42
CKAP4-202ENST00000552828 BPY2O14599 106 aa6.18□□□□□ -1.42
CKAP4-202ENST00000552828 C20orf197Q8N268 126 aa6.18□□□□□ -1.42
CKAP4-202ENST00000552828 USH2AO75445 5202 aa6.18□□□□□ -1.42
CKAP4-202ENST00000552828 NDUFC1O43677 76 aa6.17□□□□□ -1.42
CKAP4-202ENST00000552828 LINC00313P59037 77 aa6.17□□□□□ -1.42
CKAP4-202ENST00000552828 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
CKAP4-202ENST00000552828 DSCR10P59022 87 aa6.16□□□□□ -1.42
CKAP4-202ENST00000552828 Q75L30 129 aa6.16□□□□□ -1.42
CKAP4-202ENST00000552828 IGHV6-1A0A0B4J1U7 121 aa6.14□□□□□ -1.43
CKAP4-202ENST00000552828 H7BZZ5 65 aa6.14□□□□□ -1.43
CKAP4-202ENST00000552828 ATP11AUNQ6ZP68 121 aa6.14□□□□□ -1.43
CKAP4-202ENST00000552828 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.13□□□□□ -1.43
CKAP4-202ENST00000552828 C20orf166-AS1Q96NR2 134 aa6.13□□□□□ -1.43
CKAP4-202ENST00000552828 FAM236DA0A1B0GTK5 79 aa6.12□□□□□ -1.43
CKAP4-202ENST00000552828 A0A1B0GVX0 72 aa6.12□□□□□ -1.43
CKAP4-202ENST00000552828 A8MUU9 505 aa6.12□□□□□ -1.43
CKAP4-202ENST00000552828 NDUFB1O75438 58 aa6.12□□□□□ -1.43
CKAP4-202ENST00000552828 FAM236CP0DP71 79 aa6.12□□□□□ -1.43
CKAP4-202ENST00000552828 ATP5EP56381 51 aaPredicted RBP6.12□□□□□ -1.43
CKAP4-202ENST00000552828 OCR1Q9BZK8 76 aa6.12□□□□□ -1.43
CKAP4-202ENST00000552828 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
CKAP4-202ENST00000552828 C8orf87E5RJ46 101 aa6.11□□□□□ -1.43
CKAP4-202ENST00000552828 NOTCH2NLQ7Z3S9 236 aa6.11□□□□□ -1.43
CKAP4-202ENST00000552828 LCE2BO14633 110 aa6.1□□□□□ -1.43
CKAP4-202ENST00000552828 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
CKAP4-202ENST00000552828 SERP1Q9Y6X1 66 aa6.1□□□□□ -1.43
CKAP4-202ENST00000552828 KRTAP16-1A8MUX0 517 aa6.09□□□□□ -1.43
CKAP4-202ENST00000552828 A8MWP4 228 aa6.09□□□□□ -1.43
CKAP4-202ENST00000552828 Q8N9L7 120 aa6.09□□□□□ -1.43
CKAP4-202ENST00000552828 TMEM254Q8TBM7 123 aa6.09□□□□□ -1.43
CKAP4-202ENST00000552828 SNURFQ9Y675 71 aa6.06□□□□□ -1.44
CKAP4-202ENST00000552828 FCGBPQ9Y6R7 5405 aaPredicted RBP6.04□□□□□ -1.44
CKAP4-202ENST00000552828 PRR15Q8IV56 129 aa6.04□□□□□ -1.44
CKAP4-202ENST00000552828 C8orf17Q9NRJ1 99 aa6.04□□□□□ -1.44
CKAP4-202ENST00000552828 HCG22E2RYF7 251 aa6.02□□□□□ -1.45
CKAP4-202ENST00000552828 K7EQZ3 153 aa6.02□□□□□ -1.45
CKAP4-202ENST00000552828 C5orf47Q569G3 176 aa6.01□□□□□ -1.45
CKAP4-202ENST00000552828 SMIM26A0A096LP01 95 aa5.99□□□□□ -1.45
CKAP4-202ENST00000552828 Q8N9P0 234 aaPredicted RBP5.99□□□□□ -1.45
CKAP4-202ENST00000552828 ZCCHC13Q8WW36 166 aaKnown RBP5.99□□□□□ -1.45
CKAP4-202ENST00000552828 MMP24-AS1A0A0U1RRL7 71 aa5.97□□□□□ -1.45
CKAP4-202ENST00000552828 MT2AP02795 61 aa5.97□□□□□ -1.45
CKAP4-202ENST00000552828 hDV103S1A0JD37 113 aa5.95□□□□□ -1.46
CKAP4-202ENST00000552828 H3BPC8 53 aa5.95□□□□□ -1.46
CKAP4-202ENST00000552828 MRPL34Q9BQ48 92 aaKnown RBP5.95□□□□□ -1.46
CKAP4-202ENST00000552828 KRTAP19-1Q8IUB9 90 aa5.93□□□□□ -1.46
CKAP4-202ENST00000552828 MT1FP04733 61 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms