RNA–Protein interactions for RNA: ENST00000552681.1

GNPTAB-210, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best)

Gene GNPTAB, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-210ENST00000552681 COX17Q14061 63 aa4.7□□□□□ -1.66
GNPTAB-210ENST00000552681 LOC110117498A0A087WWA1 95 aa4.69□□□□□ -1.66
GNPTAB-210ENST00000552681 KRTAP10-3P60369 221 aa4.69□□□□□ -1.66
GNPTAB-210ENST00000552681 HTN1P15515 57 aa4.68□□□□□ -1.66
GNPTAB-210ENST00000552681 COX7BP24311 80 aa4.67□□□□□ -1.66
GNPTAB-210ENST00000552681 KRTAP11-1Q8IUC1 163 aa4.66□□□□□ -1.66
GNPTAB-210ENST00000552681 NOTCH3Q9UM47 2321 aa4.66□□□□□ -1.66
GNPTAB-210ENST00000552681 VWFP04275 2813 aa4.65□□□□□ -1.67
GNPTAB-210ENST00000552681 NCR3O14931 201 aa4.65□□□□□ -1.67
GNPTAB-210ENST00000552681 RPL39P62891 51 aaKnown RBP4.64□□□□□ -1.67
GNPTAB-210ENST00000552681 TRRAPQ9Y4A5 3859 aa4.64□□□□□ -1.67
GNPTAB-210ENST00000552681 TGP01266 2768 aa4.64□□□□□ -1.67
GNPTAB-210ENST00000552681 DSCR10P59022 87 aa4.63□□□□□ -1.67
GNPTAB-210ENST00000552681 PKD1L1Q8TDX9 2849 aa4.63□□□□□ -1.67
GNPTAB-210ENST00000552681 SSBP3-AS1Q7Z2R9 100 aa4.62□□□□□ -1.67
GNPTAB-210ENST00000552681 IGLV4-60A0A075B6I1 120 aa4.61□□□□□ -1.67
GNPTAB-210ENST00000552681 NOP10Q9NPE3 64 aaKnown RBP4.61□□□□□ -1.67
GNPTAB-210ENST00000552681 DEFB104AQ8WTQ1 72 aa4.6□□□□□ -1.67
GNPTAB-210ENST00000552681 ETDCA0A1B0GVM5 59 aa4.6□□□□□ -1.67
GNPTAB-210ENST00000552681 KRTAP4-9Q9BYQ8 210 aa4.6□□□□□ -1.67
GNPTAB-210ENST00000552681 Q8N9L7 120 aa4.59□□□□□ -1.67
GNPTAB-210ENST00000552681 PRKDCP78527 4128 aaKnown RBP4.59□□□□□ -1.68
GNPTAB-210ENST00000552681 LCE5AQ5TCM9 118 aa4.58□□□□□ -1.68
GNPTAB-210ENST00000552681 KCNQ1DNQ9H478 68 aa4.58□□□□□ -1.68
GNPTAB-210ENST00000552681 INE1O15225 51 aa4.57□□□□□ -1.68
GNPTAB-210ENST00000552681 NOTCH1P46531 2555 aa4.57□□□□□ -1.68
GNPTAB-210ENST00000552681 IGKV2D-24A0A075B6R9 120 aa4.57□□□□□ -1.68
GNPTAB-210ENST00000552681 Q6ZRN7 208 aaPredicted RBP4.56□□□□□ -1.68
GNPTAB-210ENST00000552681 Q6ZQY7 126 aa4.55□□□□□ -1.68
GNPTAB-210ENST00000552681 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
GNPTAB-210ENST00000552681 CMYA5Q8N3K9 4069 aa4.53□□□□□ -1.68
GNPTAB-210ENST00000552681 H0YGX0 51 aa4.53□□□□□ -1.68
GNPTAB-210ENST00000552681 PRO0255Q9UI72 69 aa4.53□□□□□ -1.68
GNPTAB-210ENST00000552681 DEFB130BP0DP73 79 aa4.52□□□□□ -1.69
GNPTAB-210ENST00000552681 DEFB130AP0DP74 79 aa4.52□□□□□ -1.69
GNPTAB-210ENST00000552681 KRTAP10-11P60412 298 aa4.52□□□□□ -1.69
GNPTAB-210ENST00000552681 CDKN2A-AS1Q9UH64 79 aa4.52□□□□□ -1.69
GNPTAB-210ENST00000552681 Q6ZRX8 168 aa4.51□□□□□ -1.69
GNPTAB-210ENST00000552681 M0R2N4 97 aa4.51□□□□□ -1.69
GNPTAB-210ENST00000552681 NDUFA1O15239 70 aa4.51□□□□□ -1.69
GNPTAB-210ENST00000552681 COX6A2Q02221 97 aa4.51□□□□□ -1.69
GNPTAB-210ENST00000552681 DEFB135Q30KP9 77 aa4.51□□□□□ -1.69
GNPTAB-210ENST00000552681 K7EIL1 84 aa4.49□□□□□ -1.69
GNPTAB-210ENST00000552681 SPART-AS1P0CW21 52 aa4.49□□□□□ -1.69
GNPTAB-210ENST00000552681 KRTAP13-2Q52LG2 175 aa4.48□□□□□ -1.69
GNPTAB-210ENST00000552681 CRIPTQ9P021 101 aa4.47□□□□□ -1.69
GNPTAB-210ENST00000552681 NBEAL2Q6ZNJ1 2754 aa4.47□□□□□ -1.69
GNPTAB-210ENST00000552681 IGKV2-28A0A075B6P5 120 aa4.46□□□□□ -1.7
GNPTAB-210ENST00000552681 IGKV2D-28P01615 120 aa4.46□□□□□ -1.7
GNPTAB-210ENST00000552681 DEFB4AO15263 64 aa4.46□□□□□ -1.7
GNPTAB-210ENST00000552681 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
GNPTAB-210ENST00000552681 H3BNG1 76 aa4.44□□□□□ -1.7
GNPTAB-210ENST00000552681 LELP1Q5T871 98 aa4.44□□□□□ -1.7
GNPTAB-210ENST00000552681 LINC00308Q8TCZ7 52 aa4.44□□□□□ -1.7
GNPTAB-210ENST00000552681 DNAH3Q8TD57 4116 aa4.44□□□□□ -1.7
GNPTAB-210ENST00000552681 KMT2CQ8NEZ4 4911 aaKnown RBP4.44□□□□□ -1.7
GNPTAB-210ENST00000552681 KRTAP9-3Q9BYQ3 159 aa4.43□□□□□ -1.7
GNPTAB-210ENST00000552681 A0A096LPF7 62 aa4.43□□□□□ -1.7
GNPTAB-210ENST00000552681 PLAC4Q8WY50 150 aa4.43□□□□□ -1.7
GNPTAB-210ENST00000552681 Q8IZM0 81 aa4.42□□□□□ -1.7
GNPTAB-210ENST00000552681 TENM3Q9P273 2699 aa4.42□□□□□ -1.7
GNPTAB-210ENST00000552681 HTN3P15516 51 aa4.42□□□□□ -1.7
GNPTAB-210ENST00000552681 GVQW2A0A096LPI5 108 aaPredicted RBP4.41□□□□□ -1.7
GNPTAB-210ENST00000552681 ANGP03950 147 aaKnown RBP4.41□□□□□ -1.7
GNPTAB-210ENST00000552681 LINC00158P58513 81 aa4.41□□□□□ -1.7
GNPTAB-210ENST00000552681 SMIM11BQ8TCY0 68 aa4.41□□□□□ -1.7
GNPTAB-210ENST00000552681 TOMM7Q9P0U1 55 aa4.41□□□□□ -1.7
GNPTAB-210ENST00000552681 RYR3Q15413 4870 aa4.39□□□□□ -1.71
GNPTAB-210ENST00000552681 COL7A1Q02388 2944 aa4.39□□□□□ -1.71
GNPTAB-210ENST00000552681 DYNC2H1Q8NCM8 4307 aaKnown RBP4.38□□□□□ -1.71
GNPTAB-210ENST00000552681 LY6G6CO95867 125 aa4.38□□□□□ -1.71
GNPTAB-210ENST00000552681 CLPSL2Q6UWE3 100 aa4.38□□□□□ -1.71
GNPTAB-210ENST00000552681 KRTAP4-5Q9BYR2 181 aa4.37□□□□□ -1.71
GNPTAB-210ENST00000552681 DNAH9Q9NYC9 4486 aa4.36□□□□□ -1.71
GNPTAB-210ENST00000552681 DEFB131BA0A096LNP1 70 aa4.36□□□□□ -1.71
GNPTAB-210ENST00000552681 BIRC6Q9NR09 4857 aa4.35□□□□□ -1.71
GNPTAB-210ENST00000552681 IGKV2-24A0A0C4DH68 120 aa4.35□□□□□ -1.71
GNPTAB-210ENST00000552681 STAB2Q8WWQ8 2551 aa4.35□□□□□ -1.71
GNPTAB-210ENST00000552681 LINC01556Q5JQF7 62 aa4.34□□□□□ -1.72
GNPTAB-210ENST00000552681 WFDC10BQ8IUB3 73 aa4.34□□□□□ -1.72
GNPTAB-210ENST00000552681 IGFL1Q6UW32 110 aa4.33□□□□□ -1.72
GNPTAB-210ENST00000552681 HUWE1Q7Z6Z7 4374 aaKnown RBP4.32□□□□□ -1.72
GNPTAB-210ENST00000552681 ANAPC11Q9NYG5 84 aa4.32□□□□□ -1.72
GNPTAB-210ENST00000552681 DNAH1Q9P2D7 4330 aa4.31□□□□□ -1.72
GNPTAB-210ENST00000552681 UNQ6190/PRO20217Q6UXQ8 127 aa4.31□□□□□ -1.72
GNPTAB-210ENST00000552681 RYR2Q92736 4967 aa4.3□□□□□ -1.72
GNPTAB-210ENST00000552681 KRTAP17-1Q9BYP8 105 aa4.3□□□□□ -1.72
GNPTAB-210ENST00000552681 KRTAP1-4P0C5Y4 121 aa4.29□□□□□ -1.72
GNPTAB-210ENST00000552681 C6orf48Q9UBA6 75 aa4.29□□□□□ -1.72
GNPTAB-210ENST00000552681 TENM2Q9NT68 2774 aa4.28□□□□□ -1.72
GNPTAB-210ENST00000552681 DNAH7Q8WXX0 4024 aa4.28□□□□□ -1.72
GNPTAB-210ENST00000552681 SACSQ9NZJ4 4579 aa4.27□□□□□ -1.73
GNPTAB-210ENST00000552681 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
GNPTAB-210ENST00000552681 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
GNPTAB-210ENST00000552681 ALMS1Q8TCU4 4167 aa4.25□□□□□ -1.73
GNPTAB-210ENST00000552681 LYSTQ99698 3801 aa4.24□□□□□ -1.73
GNPTAB-210ENST00000552681 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
GNPTAB-210ENST00000552681 CSMD3Q7Z407 3707 aa4.23□□□□□ -1.73
GNPTAB-210ENST00000552681 LINC00575Q6W349 94 aa4.23□□□□□ -1.73
GNPTAB-210ENST00000552681 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms