RNA–Protein interactions for RNA: ENST00000552428.6

R3HDM2-214, Transcript of R3H domain containing 2, humanhuman

TSL 5

Gene R3HDM2, Length 430 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-214ENST00000552428 TLN2Q9Y4G6 2542 aa2.97□□□□□ -1.93
R3HDM2-214ENST00000552428 OTOGQ6ZRI0 2925 aa2.97□□□□□ -1.93
R3HDM2-214ENST00000552428 HIVEP2P31629 2446 aa2.97□□□□□ -1.93
R3HDM2-214ENST00000552428 SPACA4Q8TDM5 124 aa2.97□□□□□ -1.93
R3HDM2-214ENST00000552428 CDH23Q9H251 3354 aa2.97□□□□□ -1.93
R3HDM2-214ENST00000552428 RPS29P62273 56 aaKnown RBP2.95□□□□□ -1.94
R3HDM2-214ENST00000552428 M0QZ58 72 aa2.94□□□□□ -1.94
R3HDM2-214ENST00000552428 AKAP9Q99996 3911 aa2.94□□□□□ -1.94
R3HDM2-214ENST00000552428 ZFHX2Q9C0A1 2572 aaPredicted RBP2.94□□□□□ -1.94
R3HDM2-214ENST00000552428 CSMD1Q96PZ7 3565 aa2.94□□□□□ -1.94
R3HDM2-214ENST00000552428 A0A0D9SG42 100 aa2.93□□□□□ -1.94
R3HDM2-214ENST00000552428 SPENQ96T58 3664 aaKnown RBP2.93□□□□□ -1.94
R3HDM2-214ENST00000552428 NAV2Q8IVL1 2488 aa2.93□□□□□ -1.94
R3HDM2-214ENST00000552428 FN1P02751 2386 aaKnown RBP2.92□□□□□ -1.94
R3HDM2-214ENST00000552428 LRBAP50851 2863 aa2.92□□□□□ -1.94
R3HDM2-214ENST00000552428 HRNRQ86YZ3 2850 aaPredicted RBP2.92□□□□□ -1.94
R3HDM2-214ENST00000552428 F8P00451 2351 aa2.92□□□□□ -1.94
R3HDM2-214ENST00000552428 APCP25054 2843 aa2.91□□□□□ -1.94
R3HDM2-214ENST00000552428 HIVEP3Q5T1R4 2406 aa2.9□□□□□ -1.94
R3HDM2-214ENST00000552428 SPRR5A0A1B0GTR4 108 aa2.9□□□□□ -1.95
R3HDM2-214ENST00000552428 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
R3HDM2-214ENST00000552428 COL12A1Q99715 3063 aa2.9□□□□□ -1.95
R3HDM2-214ENST00000552428 SMG1Q96Q15 3661 aaKnown RBP2.9□□□□□ -1.95
R3HDM2-214ENST00000552428 OTOGLQ3ZCN5 2332 aa2.9□□□□□ -1.95
R3HDM2-214ENST00000552428 DMXL1Q9Y485 3027 aa2.89□□□□□ -1.95
R3HDM2-214ENST00000552428 KRTAP9-6A8MVA2 160 aa2.89□□□□□ -1.95
R3HDM2-214ENST00000552428 PTPN13Q12923 2485 aa2.89□□□□□ -1.95
R3HDM2-214ENST00000552428 KRTAP13-4Q3LI77 160 aa2.89□□□□□ -1.95
R3HDM2-214ENST00000552428 JMJD1CQ15652 2540 aa2.89□□□□□ -1.95
R3HDM2-214ENST00000552428 UBR5O95071 2799 aaPredicted RBP2.89□□□□□ -1.95
R3HDM2-214ENST00000552428 SETXQ7Z333 2677 aaKnown RBP2.88□□□□□ -1.95
R3HDM2-214ENST00000552428 SONP18583 2426 aaKnown RBP2.88□□□□□ -1.95
R3HDM2-214ENST00000552428 ADGRG4Q8IZF6 3080 aa2.88□□□□□ -1.95
R3HDM2-214ENST00000552428 DCHS2Q6V1P9 2916 aa2.87□□□□□ -1.95
R3HDM2-214ENST00000552428 CELSR3Q9NYQ7 3312 aa2.87□□□□□ -1.95
R3HDM2-214ENST00000552428 ATMQ13315 3056 aa2.85□□□□□ -1.95
R3HDM2-214ENST00000552428 CELSR1Q9NYQ6 3014 aa2.85□□□□□ -1.95
R3HDM2-214ENST00000552428 MYO9AB2RTY4 2548 aa2.85□□□□□ -1.95
R3HDM2-214ENST00000552428 ZFYVE26Q68DK2 2539 aa2.84□□□□□ -1.95
R3HDM2-214ENST00000552428 NF1P21359 2839 aa2.84□□□□□ -1.95
R3HDM2-214ENST00000552428 ZNF462Q96JM2 2506 aa2.83□□□□□ -1.96
R3HDM2-214ENST00000552428 USP9XQ93008 2570 aaPredicted RBP2.83□□□□□ -1.96
R3HDM2-214ENST00000552428 UTP20O75691 2785 aaKnown RBP2.83□□□□□ -1.96
R3HDM2-214ENST00000552428 DNAH1Q9P2D7 4330 aa2.83□□□□□ -1.96
R3HDM2-214ENST00000552428 NBPF19A0A087WUL8 3843 aa2.83□□□□□ -1.96
R3HDM2-214ENST00000552428 TEX15Q9BXT5 2789 aa2.83□□□□□ -1.96
R3HDM2-214ENST00000552428 LOC400499M0QZD8 3231 aa2.82□□□□□ -1.96
R3HDM2-214ENST00000552428 MUC6Q6W4X9 2439 aa2.82□□□□□ -1.96
R3HDM2-214ENST00000552428 CCDC168Q8NDH2 2452 aa2.81□□□□□ -1.96
R3HDM2-214ENST00000552428 CEP295Q9C0D2 2601 aa2.81□□□□□ -1.96
R3HDM2-214ENST00000552428 ANKRD11Q6UB99 2663 aaPredicted RBP2.81□□□□□ -1.96
R3HDM2-214ENST00000552428 DOPEY1Q5JWR5 2465 aa2.8□□□□□ -1.96
R3HDM2-214ENST00000552428 MTORP42345 2549 aa2.8□□□□□ -1.96
R3HDM2-214ENST00000552428 VPS13DQ5THJ4 4388 aa2.79□□□□□ -1.96
R3HDM2-214ENST00000552428 Q5VSD8 79 aa2.79□□□□□ -1.96
R3HDM2-214ENST00000552428 GCN1Q92616 2671 aaKnown RBP2.79□□□□□ -1.96
R3HDM2-214ENST00000552428 MYO15AQ9UKN7 3530 aa2.79□□□□□ -1.96
R3HDM2-214ENST00000552428 CENPEQ02224 2701 aa2.78□□□□□ -1.96
R3HDM2-214ENST00000552428 FAM208BQ5VWN6 2430 aa2.77□□□□□ -1.97
R3HDM2-214ENST00000552428 UNC79Q9P2D8 2635 aa2.76□□□□□ -1.97
R3HDM2-214ENST00000552428 CRYBG3Q68DQ2 2970 aa2.76□□□□□ -1.97
R3HDM2-214ENST00000552428 LAMA5O15230 3695 aa2.75□□□□□ -1.97
R3HDM2-214ENST00000552428 COL6A5A8TX70 2615 aa2.74□□□□□ -1.97
R3HDM2-214ENST00000552428 NBEAL2Q6ZNJ1 2754 aa2.74□□□□□ -1.97
R3HDM2-214ENST00000552428 PIEZO1Q92508 2521 aa2.74□□□□□ -1.97
R3HDM2-214ENST00000552428 KRTAP10-8P60410 259 aa2.73□□□□□ -1.97
R3HDM2-214ENST00000552428 VWFP04275 2813 aa2.73□□□□□ -1.97
R3HDM2-214ENST00000552428 MEGF8Q7Z7M0 2845 aa2.73□□□□□ -1.97
R3HDM2-214ENST00000552428 BSNQ9UPA5 3926 aa2.73□□□□□ -1.97
R3HDM2-214ENST00000552428 PKD1L2Q7Z442 2459 aa2.73□□□□□ -1.97
R3HDM2-214ENST00000552428 CHD8Q9HCK8 2581 aa2.72□□□□□ -1.97
R3HDM2-214ENST00000552428 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
R3HDM2-214ENST00000552428 ANK3Q12955 4377 aaKnown RBP2.7□□□□□ -1.98
R3HDM2-214ENST00000552428 HELZ2Q9BYK8 2649 aaKnown RBP2.7□□□□□ -1.98
R3HDM2-214ENST00000552428 ACANP16112 2415 aa2.7□□□□□ -1.98
R3HDM2-214ENST00000552428 ASPMQ8IZT6 3477 aa2.7□□□□□ -1.98
R3HDM2-214ENST00000552428 TENM4Q6N022 2769 aa2.69□□□□□ -1.98
R3HDM2-214ENST00000552428 SRRM2Q9UQ35 2752 aaKnown RBP2.69□□□□□ -1.98
R3HDM2-214ENST00000552428 NIPBLQ6KC79 2804 aaeCLIP2.69□□□□□ -1.98
R3HDM2-214ENST00000552428 MXRA5Q9NR99 2828 aa2.68□□□□□ -1.98
R3HDM2-214ENST00000552428 TTC28Q96AY4 2481 aa2.68□□□□□ -1.98
R3HDM2-214ENST00000552428 FBN1P35555 2871 aaKnown RBP2.67□□□□□ -1.98
R3HDM2-214ENST00000552428 HECTD1Q9ULT8 2610 aa2.67□□□□□ -1.98
R3HDM2-214ENST00000552428 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
R3HDM2-214ENST00000552428 USP9YO00507 2555 aaPredicted RBP2.67□□□□□ -1.98
R3HDM2-214ENST00000552428 RELNP78509 3460 aa2.67□□□□□ -1.98
R3HDM2-214ENST00000552428 FRAS1Q86XX4 4008 aa2.66□□□□□ -1.98
R3HDM2-214ENST00000552428 LRRK2Q5S007 2527 aa2.66□□□□□ -1.98
R3HDM2-214ENST00000552428 TGP01266 2768 aa2.66□□□□□ -1.98
R3HDM2-214ENST00000552428 EPG5Q9HCE0 2579 aa2.65□□□□□ -1.98
R3HDM2-214ENST00000552428 SVEP1Q4LDE5 3571 aa2.65□□□□□ -1.98
R3HDM2-214ENST00000552428 DNAH8Q96JB1 4490 aa2.65□□□□□ -1.98
R3HDM2-214ENST00000552428 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
R3HDM2-214ENST00000552428 BAHCC1Q9P281 2608 aa2.65□□□□□ -1.99
R3HDM2-214ENST00000552428 TRRAPQ9Y4A5 3859 aa2.64□□□□□ -1.99
R3HDM2-214ENST00000552428 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
R3HDM2-214ENST00000552428 SMR3AQ99954 134 aa2.64□□□□□ -1.99
R3HDM2-214ENST00000552428 VPS13CQ709C8 3753 aa2.63□□□□□ -1.99
R3HDM2-214ENST00000552428 HIVEP1P15822 2718 aa2.63□□□□□ -1.99
R3HDM2-214ENST00000552428 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms