RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 LOC110117498A0A087WWA1 95 aa7.35□□□□□ -1.23
DDX54-210ENST00000552375 PCP4L1A6NKN8 68 aa7.35□□□□□ -1.23
DDX54-210ENST00000552375 COX6B2Q6YFQ2 88 aa7.35□□□□□ -1.23
DDX54-210ENST00000552375 ATP11AUNQ6ZP68 121 aa7.35□□□□□ -1.23
DDX54-210ENST00000552375 NOTCH2NLQ7Z3S9 236 aa7.35□□□□□ -1.23
DDX54-210ENST00000552375 SPCS1Q9Y6A9 102 aa7.35□□□□□ -1.23
DDX54-210ENST00000552375 H3BT86 120 aa7.34□□□□□ -1.23
DDX54-210ENST00000552375 LINC00313P59037 77 aa7.34□□□□□ -1.23
DDX54-210ENST00000552375 A8MUU9 505 aa7.33□□□□□ -1.24
DDX54-210ENST00000552375 COL5A1-AS1Q5SY13 56 aa7.33□□□□□ -1.24
DDX54-210ENST00000552375 C20orf166-AS1Q96NR2 134 aa7.33□□□□□ -1.24
DDX54-210ENST00000552375 KRTAP16-1A8MUX0 517 aa7.31□□□□□ -1.24
DDX54-210ENST00000552375 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
DDX54-210ENST00000552375 FSIP2Q5CZC0 6907 aa7.31□□□□□ -1.24
DDX54-210ENST00000552375 A0A1B0GVX0 72 aa7.3□□□□□ -1.24
DDX54-210ENST00000552375 KRTAP10-6P60371 365 aaPredicted RBP7.3□□□□□ -1.24
DDX54-210ENST00000552375 PDE6GP18545 87 aa7.29□□□□□ -1.24
DDX54-210ENST00000552375 C21orf62-AS1Q17RA5 79 aa7.29□□□□□ -1.24
DDX54-210ENST00000552375 M0R2T5 61 aa7.28□□□□□ -1.24
DDX54-210ENST00000552375 J3KT08 172 aa7.26□□□□□ -1.25
DDX54-210ENST00000552375 SMCPP49901 116 aaPredicted RBP7.26□□□□□ -1.25
DDX54-210ENST00000552375 C8orf87E5RJ46 101 aa7.25□□□□□ -1.25
DDX54-210ENST00000552375 K7EP34 96 aa7.25□□□□□ -1.25
DDX54-210ENST00000552375 A0A1B0GW54 56 aa7.23□□□□□ -1.25
DDX54-210ENST00000552375 NREPQ16612 68 aa7.23□□□□□ -1.25
DDX54-210ENST00000552375 A8MWP4 228 aa7.22□□□□□ -1.25
DDX54-210ENST00000552375 NDUFB1O75438 58 aa7.22□□□□□ -1.25
DDX54-210ENST00000552375 CRCT1Q9UGL9 99 aa7.22□□□□□ -1.25
DDX54-210ENST00000552375 IGKV3D-7A0A0C4DH55 119 aa7.21□□□□□ -1.26
DDX54-210ENST00000552375 PRO0461Q9UI25 63 aa7.21□□□□□ -1.26
DDX54-210ENST00000552375 C8orf17Q9NRJ1 99 aa7.2□□□□□ -1.26
DDX54-210ENST00000552375 K7EQZ3 153 aa7.16□□□□□ -1.26
DDX54-210ENST00000552375 GTF2H5Q6ZYL4 71 aa7.15□□□□□ -1.26
DDX54-210ENST00000552375 PRR15Q8IV56 129 aa7.15□□□□□ -1.26
DDX54-210ENST00000552375 Q6ZVQ6 151 aa7.14□□□□□ -1.27
DDX54-210ENST00000552375 MMP24-AS1A0A0U1RRL7 71 aa7.13□□□□□ -1.27
DDX54-210ENST00000552375 BPY2O14599 106 aa7.13□□□□□ -1.27
DDX54-210ENST00000552375 ZCCHC13Q8WW36 166 aaKnown RBP7.12□□□□□ -1.27
DDX54-210ENST00000552375 Q8N9L7 120 aa7.11□□□□□ -1.27
DDX54-210ENST00000552375 Q8N9P0 234 aaPredicted RBP7.1□□□□□ -1.27
DDX54-210ENST00000552375 FAM236DA0A1B0GTK5 79 aa7.09□□□□□ -1.27
DDX54-210ENST00000552375 FAM236CP0DP71 79 aa7.09□□□□□ -1.27
DDX54-210ENST00000552375 HRES1P13985 223 aa7.08□□□□□ -1.28
DDX54-210ENST00000552375 TMEM254Q8TBM7 123 aa7.08□□□□□ -1.28
DDX54-210ENST00000552375 LINC00846Q9NV44 126 aa7.08□□□□□ -1.28
DDX54-210ENST00000552375 NDUFS5O43920 106 aa7.07□□□□□ -1.28
DDX54-210ENST00000552375 ETDBQ3ZM63 59 aa7.07□□□□□ -1.28
DDX54-210ENST00000552375 WFDC13Q8IUB5 93 aa7.07□□□□□ -1.28
DDX54-210ENST00000552375 MRPL34Q9BQ48 92 aaKnown RBP7.07□□□□□ -1.28
DDX54-210ENST00000552375 hDV103S1A0JD37 113 aa7.06□□□□□ -1.28
DDX54-210ENST00000552375 F8W1H4 67 aa7.05□□□□□ -1.28
DDX54-210ENST00000552375 UBL5Q9BZL1 73 aa7.05□□□□□ -1.28
DDX54-210ENST00000552375 MPLKIPQ8TAP9 179 aa7.04□□□□□ -1.28
DDX54-210ENST00000552375 RBM12B-AS1Q9P1G2 102 aa7.03□□□□□ -1.28
DDX54-210ENST00000552375 SPINK7P58062 85 aa7.02□□□□□ -1.29
DDX54-210ENST00000552375 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
DDX54-210ENST00000552375 CASC2Q6XLA1 102 aa7□□□□□ -1.29
DDX54-210ENST00000552375 USH2AO75445 5202 aa7□□□□□ -1.29
DDX54-210ENST00000552375 HCG22E2RYF7 251 aa6.97□□□□□ -1.29
DDX54-210ENST00000552375 SSPOA2VEC9 5147 aa6.95□□□□□ -1.3
DDX54-210ENST00000552375 IGKV2D-30A0A075B6S6 120 aa6.93□□□□□ -1.3
DDX54-210ENST00000552375 A0A1B0GV90 55 aa6.93□□□□□ -1.3
DDX54-210ENST00000552375 MT2AP02795 61 aa6.93□□□□□ -1.3
DDX54-210ENST00000552375 IGKV2-30P06310 120 aa6.93□□□□□ -1.3
DDX54-210ENST00000552375 Q5W150 140 aa6.93□□□□□ -1.3
DDX54-210ENST00000552375 MT1FP04733 61 aa6.88□□□□□ -1.31
DDX54-210ENST00000552375 CXCL6P80162 114 aa6.88□□□□□ -1.31
DDX54-210ENST00000552375 C7orf65Q6ZTY9 151 aa6.87□□□□□ -1.31
DDX54-210ENST00000552375 ACYP1P07311 99 aa6.83□□□□□ -1.32
DDX54-210ENST00000552375 FAM240AA0A1B0GVK7 77 aa6.81□□□□□ -1.32
DDX54-210ENST00000552375 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
DDX54-210ENST00000552375 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
DDX54-210ENST00000552375 FCGBPQ9Y6R7 5405 aaPredicted RBP6.78□□□□□ -1.32
DDX54-210ENST00000552375 LCE2BO14633 110 aa6.78□□□□□ -1.32
DDX54-210ENST00000552375 HIST1H4AP62805 103 aaKnown RBP6.78□□□□□ -1.32
DDX54-210ENST00000552375 C4orf26Q17RF5 130 aa6.77□□□□□ -1.33
DDX54-210ENST00000552375 ATP5EP2Q5VTU8 51 aa6.77□□□□□ -1.33
DDX54-210ENST00000552375 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.74□□□□□ -1.33
DDX54-210ENST00000552375 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
DDX54-210ENST00000552375 TP53AIP1Q9HCN2 124 aa6.74□□□□□ -1.33
DDX54-210ENST00000552375 A0A087WVE0 104 aa6.73□□□□□ -1.33
DDX54-210ENST00000552375 LINC00643Q86TS7 51 aa6.69□□□□□ -1.34
DDX54-210ENST00000552375 KRTAP19-1Q8IUB9 90 aa6.69□□□□□ -1.34
DDX54-210ENST00000552375 TRAV22A0A0B4J277 110 aa6.67□□□□□ -1.34
DDX54-210ENST00000552375 KRTAP9-7A8MTY7 169 aa6.66□□□□□ -1.34
DDX54-210ENST00000552375 C1orf64Q8NEQ6 169 aa6.64□□□□□ -1.35
DDX54-210ENST00000552375 H0Y9P7 68 aa6.63□□□□□ -1.35
DDX54-210ENST00000552375 KRTAP3-1Q9BYR8 98 aa6.63□□□□□ -1.35
DDX54-210ENST00000552375 J3QR89 54 aa6.62□□□□□ -1.35
DDX54-210ENST00000552375 CYP4F30PQ9H0H9 118 aa6.61□□□□□ -1.35
DDX54-210ENST00000552375 LOC101927531A0A1B0GV80 90 aa6.6□□□□□ -1.35
DDX54-210ENST00000552375 UQCRQO14949 82 aa6.6□□□□□ -1.35
DDX54-210ENST00000552375 C5orf47Q569G3 176 aa6.6□□□□□ -1.35
DDX54-210ENST00000552375 S4R3F8 94 aa6.6□□□□□ -1.35
DDX54-210ENST00000552375 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
DDX54-210ENST00000552375 LCA10Q71F78 164 aa6.55□□□□□ -1.36
DDX54-210ENST00000552375 ATOX1O00244 68 aa6.54□□□□□ -1.36
DDX54-210ENST00000552375 MACF1Q9UPN3 7388 aaKnown RBP6.52□□□□□ -1.36
DDX54-210ENST00000552375 LINC00208Q96KT6 92 aa6.52□□□□□ -1.37
DDX54-210ENST00000552375 OCR1Q9BZK8 76 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms