RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 SIGMAR1Q99720 223 aa9.35□□□□□ -0.91
CDK4-208ENST00000551706 RPL37P61927 97 aaKnown RBP9.34□□□□□ -0.91
CDK4-208ENST00000551706 LINC00472Q9H8W2 130 aa9.34□□□□□ -0.91
CDK4-208ENST00000551706 IGKV4-1P06312 121 aa9.33□□□□□ -0.92
CDK4-208ENST00000551706 C14orf132Q9NPU4 83 aa9.33□□□□□ -0.92
CDK4-208ENST00000551706 PCOTHQ58A44 107 aa9.32□□□□□ -0.92
CDK4-208ENST00000551706 J3QR89 54 aa9.31□□□□□ -0.92
CDK4-208ENST00000551706 Q75L30 129 aa9.28□□□□□ -0.92
CDK4-208ENST00000551706 DEFB116Q30KQ4 102 aa9.27□□□□□ -0.93
CDK4-208ENST00000551706 J3KT08 172 aa9.26□□□□□ -0.93
CDK4-208ENST00000551706 KRTAP4-1Q9BYQ7 146 aa9.26□□□□□ -0.93
CDK4-208ENST00000551706 K7ERU9 68 aa9.24□□□□□ -0.93
CDK4-208ENST00000551706 LINC00313P59037 77 aa9.24□□□□□ -0.93
CDK4-208ENST00000551706 DSCR10P59022 87 aa9.23□□□□□ -0.93
CDK4-208ENST00000551706 C20orf166-AS1Q96NR2 134 aa9.23□□□□□ -0.93
CDK4-208ENST00000551706 ATP11AUNQ6ZP68 121 aa9.22□□□□□ -0.93
CDK4-208ENST00000551706 A8MUU9 505 aa9.2□□□□□ -0.94
CDK4-208ENST00000551706 IGHV6-1A0A0B4J1U7 121 aa9.19□□□□□ -0.94
CDK4-208ENST00000551706 A0A1B0GVX0 72 aa9.19□□□□□ -0.94
CDK4-208ENST00000551706 KRTAP9-7A8MTY7 169 aa9.19□□□□□ -0.94
CDK4-208ENST00000551706 C8orf87E5RJ46 101 aa9.19□□□□□ -0.94
CDK4-208ENST00000551706 ACYP1P07311 99 aa9.19□□□□□ -0.94
CDK4-208ENST00000551706 FAM240AA0A1B0GVK7 77 aa9.18□□□□□ -0.94
CDK4-208ENST00000551706 NDUFB1O75438 58 aa9.18□□□□□ -0.94
CDK4-208ENST00000551706 NREPQ16612 68 aa9.17□□□□□ -0.94
CDK4-208ENST00000551706 KRTAP16-1A8MUX0 517 aa9.14□□□□□ -0.95
CDK4-208ENST00000551706 A8MWP4 228 aa9.14□□□□□ -0.95
CDK4-208ENST00000551706 NOTCH2NLQ7Z3S9 236 aa9.14□□□□□ -0.95
CDK4-208ENST00000551706 LCE2CQ5TA81 110 aa9.09□□□□□ -0.95
CDK4-208ENST00000551706 UBL5Q9BZL1 73 aa9.09□□□□□ -0.95
CDK4-208ENST00000551706 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.08□□□□□ -0.96
CDK4-208ENST00000551706 IGKV3D-7A0A0C4DH55 119 aa9.07□□□□□ -0.96
CDK4-208ENST00000551706 PRR15Q8IV56 129 aa9.06□□□□□ -0.96
CDK4-208ENST00000551706 LINC00846Q9NV44 126 aa9.06□□□□□ -0.96
CDK4-208ENST00000551706 C8orf17Q9NRJ1 99 aa9.05□□□□□ -0.96
CDK4-208ENST00000551706 MT1HP80294 61 aa9.04□□□□□ -0.96
CDK4-208ENST00000551706 BPY2O14599 106 aa9.03□□□□□ -0.96
CDK4-208ENST00000551706 Q6ZVQ6 151 aa9.03□□□□□ -0.96
CDK4-208ENST00000551706 LORP23490 312 aaPredicted RBP9.01□□□□□ -0.97
CDK4-208ENST00000551706 KRTAP19-2Q3LHN2 52 aa9.01□□□□□ -0.97
CDK4-208ENST00000551706 LINC00643Q86TS7 51 aa8.99□□□□□ -0.97
CDK4-208ENST00000551706 Q8N9P0 234 aaPredicted RBP8.99□□□□□ -0.97
CDK4-208ENST00000551706 K7EQZ3 153 aa8.97□□□□□ -0.97
CDK4-208ENST00000551706 KRTAP10-6P60371 365 aaPredicted RBP8.97□□□□□ -0.97
CDK4-208ENST00000551706 ATP5EP2Q5VTU8 51 aa8.97□□□□□ -0.97
CDK4-208ENST00000551706 COX6B2Q6YFQ2 88 aa8.96□□□□□ -0.98
CDK4-208ENST00000551706 TMEM254Q8TBM7 123 aa8.95□□□□□ -0.98
CDK4-208ENST00000551706 MMP24-AS1A0A0U1RRL7 71 aa8.94□□□□□ -0.98
CDK4-208ENST00000551706 ZCCHC13Q8WW36 166 aaKnown RBP8.94□□□□□ -0.98
CDK4-208ENST00000551706 MRPL34Q9BQ48 92 aaKnown RBP8.93□□□□□ -0.98
CDK4-208ENST00000551706 hDV103S1A0JD37 113 aa8.92□□□□□ -0.98
CDK4-208ENST00000551706 CXCL6P80162 114 aa8.91□□□□□ -0.98
CDK4-208ENST00000551706 Q8N9L7 120 aa8.87□□□□□ -0.99
CDK4-208ENST00000551706 MT-ATP8P03928 68 aa8.85□□□□□ -0.99
CDK4-208ENST00000551706 M0R2T5 61 aa8.84□□□□□ -0.99
CDK4-208ENST00000551706 NDUFS5O43920 106 aa8.84□□□□□ -0.99
CDK4-208ENST00000551706 CASC2Q6XLA1 102 aa8.84□□□□□ -0.99
CDK4-208ENST00000551706 HIST1H4AP62805 103 aaKnown RBP8.82□□□□□ -1
CDK4-208ENST00000551706 WFDC13Q8IUB5 93 aa8.82□□□□□ -1
CDK4-208ENST00000551706 IMUPQ9GZP8 106 aa8.82□□□□□ -1
CDK4-208ENST00000551706 SPINK7P58062 85 aa8.81□□□□□ -1
CDK4-208ENST00000551706 RBM12B-AS1Q9P1G2 102 aa8.81□□□□□ -1
CDK4-208ENST00000551706 HRES1P13985 223 aa8.8□□□□□ -1
CDK4-208ENST00000551706 HCG22E2RYF7 251 aa8.78□□□□□ -1
CDK4-208ENST00000551706 MPLKIPQ8TAP9 179 aa8.78□□□□□ -1
CDK4-208ENST00000551706 SSPOA2VEC9 5147 aa8.77□□□□□ -1.01
CDK4-208ENST00000551706 FAM236DA0A1B0GTK5 79 aa8.77□□□□□ -1.01
CDK4-208ENST00000551706 FAM236CP0DP71 79 aa8.77□□□□□ -1.01
CDK4-208ENST00000551706 FLGP20930 4061 aaPredicted RBP8.76□□□□□ -1.01
CDK4-208ENST00000551706 USH2AO75445 5202 aa8.73□□□□□ -1.01
CDK4-208ENST00000551706 A0A087WVE0 104 aa8.71□□□□□ -1.02
CDK4-208ENST00000551706 Q5W150 140 aa8.68□□□□□ -1.02
CDK4-208ENST00000551706 FCGBPQ9Y6R7 5405 aaPredicted RBP8.67□□□□□ -1.02
CDK4-208ENST00000551706 FAM236AA0A1B0GUQ0 79 aa8.65□□□□□ -1.02
CDK4-208ENST00000551706 FAM236BA0A1B0GV22 79 aa8.65□□□□□ -1.02
CDK4-208ENST00000551706 C7orf65Q6ZTY9 151 aa8.65□□□□□ -1.02
CDK4-208ENST00000551706 TP53AIP1Q9HCN2 124 aa8.64□□□□□ -1.03
CDK4-208ENST00000551706 SYNE2Q8WXH0 6885 aaKnown RBP8.63□□□□□ -1.03
CDK4-208ENST00000551706 IGKV2D-30A0A075B6S6 120 aa8.63□□□□□ -1.03
CDK4-208ENST00000551706 IGKV2-30P06310 120 aa8.63□□□□□ -1.03
CDK4-208ENST00000551706 SCGB1A1P11684 91 aa8.63□□□□□ -1.03
CDK4-208ENST00000551706 MACF1Q9UPN3 7388 aaKnown RBP8.6□□□□□ -1.03
CDK4-208ENST00000551706 ATOX1O00244 68 aa8.57□□□□□ -1.04
CDK4-208ENST00000551706 PCP4P48539 62 aa8.56□□□□□ -1.04
CDK4-208ENST00000551706 SMIM20Q8N5G0 67 aa8.55□□□□□ -1.04
CDK4-208ENST00000551706 KRTAP19-1Q8IUB9 90 aa8.5□□□□□ -1.05
CDK4-208ENST00000551706 H1FX-AS1Q4G0G2 97 aa8.48□□□□□ -1.05
CDK4-208ENST00000551706 UQCRQO14949 82 aa8.47□□□□□ -1.05
CDK4-208ENST00000551706 TRAV22A0A0B4J277 110 aa8.46□□□□□ -1.06
CDK4-208ENST00000551706 ANAPC13Q9BS18 74 aa8.46□□□□□ -1.06
CDK4-208ENST00000551706 TRAV7A0A075B6U4 112 aa8.45□□□□□ -1.06
CDK4-208ENST00000551706 C4orf26Q17RF5 130 aa8.45□□□□□ -1.06
CDK4-208ENST00000551706 OCR1Q9BZK8 76 aa8.45□□□□□ -1.06
CDK4-208ENST00000551706 KRTAP9-8Q9BYQ0 159 aa8.44□□□□□ -1.06
CDK4-208ENST00000551706 SERP2Q8N6R1 65 aa8.43□□□□□ -1.06
CDK4-208ENST00000551706 LOC101927531A0A1B0GV80 90 aa8.39□□□□□ -1.07
CDK4-208ENST00000551706 CYP4F30PQ9H0H9 118 aa8.39□□□□□ -1.07
CDK4-208ENST00000551706 MP68P56378 58 aa8.38□□□□□ -1.07
CDK4-208ENST00000551706 C5orf47Q569G3 176 aa8.38□□□□□ -1.07
CDK4-208ENST00000551706 H0Y9P7 68 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms