RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 SNAPINO95295 136 aa6.35□□□□□ -1.39
VPS29-209ENST00000551655 C12orf57Q99622 126 aa6.34□□□□□ -1.39
VPS29-209ENST00000551655 A0A1B0GVX0 72 aa6.33□□□□□ -1.4
VPS29-209ENST00000551655 IMUPQ9GZP8 106 aa6.33□□□□□ -1.4
VPS29-209ENST00000551655 C8orf87E5RJ46 101 aa6.32□□□□□ -1.4
VPS29-209ENST00000551655 PET117Q6UWS5 81 aa6.32□□□□□ -1.4
VPS29-209ENST00000551655 C3orf79P0CE67 100 aa6.31□□□□□ -1.4
VPS29-209ENST00000551655 BVES-AS1Q5T3Y7 98 aa6.31□□□□□ -1.4
VPS29-209ENST00000551655 SVBPQ8N300 66 aa6.31□□□□□ -1.4
VPS29-209ENST00000551655 A0A1B0GV72 72 aa6.3□□□□□ -1.4
VPS29-209ENST00000551655 RAB37Q96AX2 223 aa6.29□□□□□ -1.4
VPS29-209ENST00000551655 C9orf118A6NHY6 69 aa6.28□□□□□ -1.4
VPS29-209ENST00000551655 ATOH7Q8N100 152 aa6.28□□□□□ -1.4
VPS29-209ENST00000551655 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
VPS29-209ENST00000551655 TRBV7-4A0A0J9YYF1 115 aa6.27□□□□□ -1.41
VPS29-209ENST00000551655 FABP2P12104 132 aa6.27□□□□□ -1.41
VPS29-209ENST00000551655 LYRM7Q5U5X0 104 aa6.27□□□□□ -1.41
VPS29-209ENST00000551655 C5orf47Q569G3 176 aa6.26□□□□□ -1.41
VPS29-209ENST00000551655 KRTAP8-1Q8IUC2 63 aa6.26□□□□□ -1.41
VPS29-209ENST00000551655 NDUFA5Q16718 116 aa6.25□□□□□ -1.41
VPS29-209ENST00000551655 ANKRD29Q8N6D5 301 aa6.23□□□□□ -1.41
VPS29-209ENST00000551655 KRTDAPP60985 99 aa6.22□□□□□ -1.41
VPS29-209ENST00000551655 IGKV3D-7A0A0C4DH55 119 aa6.21□□□□□ -1.42
VPS29-209ENST00000551655 DSTQ03001 7570 aaKnown RBP6.21□□□□□ -1.42
VPS29-209ENST00000551655 TRACP01848 142 aa6.18□□□□□ -1.42
VPS29-209ENST00000551655 CCKP06307 115 aa6.18□□□□□ -1.42
VPS29-209ENST00000551655 DSCR8Q96T75 97 aa6.17□□□□□ -1.42
VPS29-209ENST00000551655 SNCGO76070 127 aa6.15□□□□□ -1.42
VPS29-209ENST00000551655 H0YGX0 51 aa6.13□□□□□ -1.43
VPS29-209ENST00000551655 HIST1H2BKO60814 126 aa6.13□□□□□ -1.43
VPS29-209ENST00000551655 HIST1H2BJP06899 126 aa6.13□□□□□ -1.43
VPS29-209ENST00000551655 HIST1H2BOP23527 126 aa6.13□□□□□ -1.43
VPS29-209ENST00000551655 HIST1H2BBP33778 126 aa6.13□□□□□ -1.43
VPS29-209ENST00000551655 HIST1H2BDP58876 126 aa6.13□□□□□ -1.43
VPS29-209ENST00000551655 HIST1H2BCP62807 126 aa6.13□□□□□ -1.43
VPS29-209ENST00000551655 HIST2H2BEQ16778 126 aa6.13□□□□□ -1.43
VPS29-209ENST00000551655 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.13□□□□□ -1.43
VPS29-209ENST00000551655 HIST1H2BHQ93079 126 aa6.13□□□□□ -1.43
VPS29-209ENST00000551655 HIST1H2BNQ99877 126 aa6.13□□□□□ -1.43
VPS29-209ENST00000551655 HIST1H2BMQ99879 126 aa6.13□□□□□ -1.43
VPS29-209ENST00000551655 C8orf17Q9NRJ1 99 aa6.13□□□□□ -1.43
VPS29-209ENST00000551655 KLKP1Q107X0 134 aa6.12□□□□□ -1.43
VPS29-209ENST00000551655 VPS25Q9BRG1 176 aa6.11□□□□□ -1.43
VPS29-209ENST00000551655 IGKV2D-30A0A075B6S6 120 aa6.1□□□□□ -1.43
VPS29-209ENST00000551655 IGKV2-30P06310 120 aa6.1□□□□□ -1.43
VPS29-209ENST00000551655 RBM3P98179 157 aaKnown RBP6.1□□□□□ -1.43
VPS29-209ENST00000551655 C4orf26Q17RF5 130 aa6.08□□□□□ -1.44
VPS29-209ENST00000551655 Q6ZVQ6 151 aa6.07□□□□□ -1.44
VPS29-209ENST00000551655 J3KT08 172 aa6.06□□□□□ -1.44
VPS29-209ENST00000551655 MT1XP80297 61 aa6.06□□□□□ -1.44
VPS29-209ENST00000551655 HIST1H4GQ99525 98 aa6.06□□□□□ -1.44
VPS29-209ENST00000551655 NDUFB1O75438 58 aa6.05□□□□□ -1.44
VPS29-209ENST00000551655 A0A1B0GX51 115 aa6.04□□□□□ -1.44
VPS29-209ENST00000551655 CSAG1Q6PB30 78 aa6.03□□□□□ -1.44
VPS29-209ENST00000551655 S4R3F8 94 aa6.02□□□□□ -1.45
VPS29-209ENST00000551655 C2orf91Q6ZV80 131 aa6.01□□□□□ -1.45
VPS29-209ENST00000551655 LCA10Q71F78 164 aa6.01□□□□□ -1.45
VPS29-209ENST00000551655 C7orf65Q6ZTY9 151 aa6□□□□□ -1.45
VPS29-209ENST00000551655 ORMDL1Q9P0S3 153 aa6□□□□□ -1.45
VPS29-209ENST00000551655 SNRPEP62304 92 aaKnown RBP5.98□□□□□ -1.45
VPS29-209ENST00000551655 Q5W150 140 aa5.98□□□□□ -1.45
VPS29-209ENST00000551655 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
VPS29-209ENST00000551655 A0A0B4J2C4 111 aa5.96□□□□□ -1.46
VPS29-209ENST00000551655 TRIAP1O43715 76 aa5.96□□□□□ -1.46
VPS29-209ENST00000551655 KRTAP12-2P59991 146 aa5.96□□□□□ -1.46
VPS29-209ENST00000551655 MRPL34Q9BQ48 92 aaKnown RBP5.96□□□□□ -1.46
VPS29-209ENST00000551655 NDUFS5O43920 106 aa5.95□□□□□ -1.46
VPS29-209ENST00000551655 DNAL4O96015 105 aa5.95□□□□□ -1.46
VPS29-209ENST00000551655 Q6ZQT0 140 aa5.95□□□□□ -1.46
VPS29-209ENST00000551655 PRR15Q8IV56 129 aa5.95□□□□□ -1.46
VPS29-209ENST00000551655 MMP24-AS1A0A0U1RRL7 71 aa5.94□□□□□ -1.46
VPS29-209ENST00000551655 TMEM256-PLSCR3K7ERE1 68 aa5.93□□□□□ -1.46
VPS29-209ENST00000551655 TMEM254Q8TBM7 123 aa5.93□□□□□ -1.46
VPS29-209ENST00000551655 COA6Q5JTJ3 125 aaKnown RBP5.92□□□□□ -1.46
VPS29-209ENST00000551655 HMCN1Q96RW7 5635 aa5.9□□□□□ -1.46
VPS29-209ENST00000551655 HSBP1L1C9JCN9 74 aa5.9□□□□□ -1.46
VPS29-209ENST00000551655 CRIPTQ9P021 101 aa5.9□□□□□ -1.46
VPS29-209ENST00000551655 UBE2V1Q13404 147 aa5.89□□□□□ -1.47
VPS29-209ENST00000551655 AHNAK2Q8IVF2 5795 aa5.88□□□□□ -1.47
VPS29-209ENST00000551655 H3BQ85 93 aa5.88□□□□□ -1.47
VPS29-209ENST00000551655 PRO1854Q9UHT4 67 aa5.87□□□□□ -1.47
VPS29-209ENST00000551655 CEND1Q8N111 149 aa5.86□□□□□ -1.47
VPS29-209ENST00000551655 hDV103S1A0JD37 113 aa5.85□□□□□ -1.47
VPS29-209ENST00000551655 K7EQZ3 153 aa5.85□□□□□ -1.47
VPS29-209ENST00000551655 COX8AP10176 69 aa5.83□□□□□ -1.48
VPS29-209ENST00000551655 C1orf64Q8NEQ6 169 aa5.83□□□□□ -1.48
VPS29-209ENST00000551655 KRTAP23-1A1A580 65 aa5.82□□□□□ -1.48
VPS29-209ENST00000551655 C9JAW5 83 aa5.82□□□□□ -1.48
VPS29-209ENST00000551655 C21orf62-AS1Q17RA5 79 aa5.81□□□□□ -1.48
VPS29-209ENST00000551655 KRTAP10-7P60409 375 aaPredicted RBP5.8□□□□□ -1.48
VPS29-209ENST00000551655 PSMB2P49721 201 aa5.78□□□□□ -1.48
VPS29-209ENST00000551655 FXYD2P54710 66 aa5.77□□□□□ -1.49
VPS29-209ENST00000551655 KRTAP5-10Q6L8G5 202 aa5.77□□□□□ -1.49
VPS29-209ENST00000551655 C14orf144Q96I85 54 aa5.76□□□□□ -1.49
VPS29-209ENST00000551655 DLEU1O43261 78 aa5.75□□□□□ -1.49
VPS29-209ENST00000551655 PLAC4Q8WY50 150 aa5.75□□□□□ -1.49
VPS29-209ENST00000551655 A0A087WVE0 104 aa5.74□□□□□ -1.49
VPS29-209ENST00000551655 A8MUN3 132 aa5.73□□□□□ -1.49
VPS29-209ENST00000551655 K7ERJ3 54 aa5.73□□□□□ -1.49
VPS29-209ENST00000551655 HIST1H2BLQ99880 126 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms