RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 Q8N9P0 234 aaPredicted RBP6.95□□□□□ -1.3
LGR5-206ENST00000550851 A0A087X002 238 aa6.95□□□□□ -1.3
LGR5-206ENST00000550851 IGLV7-46A0A075B6I9 117 aa6.93□□□□□ -1.3
LGR5-206ENST00000550851 COX6B2Q6YFQ2 88 aa6.92□□□□□ -1.3
LGR5-206ENST00000550851 SPANXA2-OT1Q8N9U9 137 aa6.91□□□□□ -1.3
LGR5-206ENST00000550851 HRES1P13985 223 aa6.91□□□□□ -1.3
LGR5-206ENST00000550851 Q5VSD8 79 aa6.89□□□□□ -1.31
LGR5-206ENST00000550851 TRRAPQ9Y4A5 3859 aa6.89□□□□□ -1.31
LGR5-206ENST00000550851 UQCR11O14957 56 aa6.87□□□□□ -1.31
LGR5-206ENST00000550851 LINC00483Q53H64 154 aa6.87□□□□□ -1.31
LGR5-206ENST00000550851 NOTCH2NLQ7Z3S9 236 aa6.85□□□□□ -1.31
LGR5-206ENST00000550851 CYP4F30PQ9H0H9 118 aa6.84□□□□□ -1.31
LGR5-206ENST00000550851 Q5W150 140 aa6.83□□□□□ -1.32
LGR5-206ENST00000550851 ZCCHC13Q8WW36 166 aaKnown RBP6.82□□□□□ -1.32
LGR5-206ENST00000550851 Q6ZSA8 131 aa6.81□□□□□ -1.32
LGR5-206ENST00000550851 MIR22HGQ0VDD5 57 aa6.8□□□□□ -1.32
LGR5-206ENST00000550851 RBM12B-AS1Q9P1G2 102 aa6.79□□□□□ -1.32
LGR5-206ENST00000550851 KRTAP29-1A8MX34 341 aaPredicted RBP6.78□□□□□ -1.32
LGR5-206ENST00000550851 SPINK7P58062 85 aa6.78□□□□□ -1.32
LGR5-206ENST00000550851 KRTAP13-1Q8IUC0 172 aa6.77□□□□□ -1.33
LGR5-206ENST00000550851 LINC01554Q52M75 96 aa6.77□□□□□ -1.33
LGR5-206ENST00000550851 A0A0D9SG42 100 aa6.76□□□□□ -1.33
LGR5-206ENST00000550851 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
LGR5-206ENST00000550851 FBN3Q75N90 2809 aa6.75□□□□□ -1.33
LGR5-206ENST00000550851 KRTAP13-2Q52LG2 175 aa6.74□□□□□ -1.33
LGR5-206ENST00000550851 OXTP01178 125 aa6.74□□□□□ -1.33
LGR5-206ENST00000550851 VPS13CQ709C8 3753 aa6.71□□□□□ -1.33
LGR5-206ENST00000550851 KRTAP21-3Q3LHN1 58 aa6.71□□□□□ -1.34
LGR5-206ENST00000550851 Q1T7F1 81 aa6.71□□□□□ -1.34
LGR5-206ENST00000550851 Q5XG85 94 aa6.69□□□□□ -1.34
LGR5-206ENST00000550851 COL7A1Q02388 2944 aa6.68□□□□□ -1.34
LGR5-206ENST00000550851 ANK3Q12955 4377 aaKnown RBP6.67□□□□□ -1.34
LGR5-206ENST00000550851 SPINT4Q6UDR6 99 aa6.67□□□□□ -1.34
LGR5-206ENST00000550851 CDC42SE1Q9NRR8 79 aa6.63□□□□□ -1.35
LGR5-206ENST00000550851 A0A1B0GU33 70 aa6.62□□□□□ -1.35
LGR5-206ENST00000550851 LINC01558Q9Y6Z2 57 aa6.61□□□□□ -1.35
LGR5-206ENST00000550851 ZNF469Q96JG9 3925 aaPredicted RBP6.59□□□□□ -1.35
LGR5-206ENST00000550851 Q5VV11 94 aa6.59□□□□□ -1.36
LGR5-206ENST00000550851 MEGF8Q7Z7M0 2845 aa6.57□□□□□ -1.36
LGR5-206ENST00000550851 ASB16-AS1Q495Z4 193 aa6.57□□□□□ -1.36
LGR5-206ENST00000550851 Q75L30 129 aa6.57□□□□□ -1.36
LGR5-206ENST00000550851 DMAC1Q96GE9 116 aa6.57□□□□□ -1.36
LGR5-206ENST00000550851 M0R2T5 61 aa6.56□□□□□ -1.36
LGR5-206ENST00000550851 CSAG1Q6PB30 78 aa6.56□□□□□ -1.36
LGR5-206ENST00000550851 S4R3F8 94 aa6.55□□□□□ -1.36
LGR5-206ENST00000550851 SEC61BP60468 96 aaKnown RBP6.53□□□□□ -1.36
LGR5-206ENST00000550851 KRTAP1-4P0C5Y4 121 aa6.52□□□□□ -1.37
LGR5-206ENST00000550851 CRIPTQ9P021 101 aa6.51□□□□□ -1.37
LGR5-206ENST00000550851 KTN1-AS1Q86SY8 53 aa6.5□□□□□ -1.37
LGR5-206ENST00000550851 RPS29P62273 56 aaKnown RBP6.47□□□□□ -1.37
LGR5-206ENST00000550851 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
LGR5-206ENST00000550851 R4GN34 69 aa6.43□□□□□ -1.38
LGR5-206ENST00000550851 PRAC1Q96KF2 57 aa6.41□□□□□ -1.38
LGR5-206ENST00000550851 SPATA8Q6RVD6 105 aa6.41□□□□□ -1.38
LGR5-206ENST00000550851 LCA10Q71F78 164 aa6.38□□□□□ -1.39
LGR5-206ENST00000550851 RPL37P61927 97 aaKnown RBP6.34□□□□□ -1.39
LGR5-206ENST00000550851 A8MU10 97 aa6.34□□□□□ -1.4
LGR5-206ENST00000550851 ADM2Q7Z4H4 148 aa6.34□□□□□ -1.4
LGR5-206ENST00000550851 CSMD3Q7Z407 3707 aa6.34□□□□□ -1.4
LGR5-206ENST00000550851 M0QZ58 72 aa6.33□□□□□ -1.4
LGR5-206ENST00000550851 H1FX-AS1Q4G0G2 97 aa6.33□□□□□ -1.4
LGR5-206ENST00000550851 A8MUU9 505 aa6.32□□□□□ -1.4
LGR5-206ENST00000550851 C20orf166-AS1Q96NR2 134 aa6.3□□□□□ -1.4
LGR5-206ENST00000550851 XP32Q5T750 250 aa6.25□□□□□ -1.41
LGR5-206ENST00000550851 A0A1B0GVY2 172 aa6.24□□□□□ -1.41
LGR5-206ENST00000550851 KRTAP16-1A8MUX0 517 aa6.22□□□□□ -1.41
LGR5-206ENST00000550851 AKAP9Q99996 3911 aa6.2□□□□□ -1.42
LGR5-206ENST00000550851 ROMO1P60602 79 aa6.14□□□□□ -1.43
LGR5-206ENST00000550851 HUWE1Q7Z6Z7 4374 aaKnown RBP6.13□□□□□ -1.43
LGR5-206ENST00000550851 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
LGR5-206ENST00000550851 DNHD1Q96M86 4753 aa6.11□□□□□ -1.43
LGR5-206ENST00000550851 KRTAP13-3Q3SY46 172 aa6.1□□□□□ -1.43
LGR5-206ENST00000550851 TPRXLQ17RH7 258 aa6.07□□□□□ -1.44
LGR5-206ENST00000550851 A6NN06 94 aa6.06□□□□□ -1.44
LGR5-206ENST00000550851 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
LGR5-206ENST00000550851 LUZP6Q538Z0 58 aa6.01□□□□□ -1.45
LGR5-206ENST00000550851 DNAH9Q9NYC9 4486 aa5.96□□□□□ -1.46
LGR5-206ENST00000550851 P0C880 135 aa5.95□□□□□ -1.46
LGR5-206ENST00000550851 H0YAA0 97 aa5.94□□□□□ -1.46
LGR5-206ENST00000550851 PLECQ15149 4684 aaKnown RBP5.89□□□□□ -1.47
LGR5-206ENST00000550851 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
LGR5-206ENST00000550851 DNAH11Q96DT5 4516 aa5.84□□□□□ -1.48
LGR5-206ENST00000550851 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
LGR5-206ENST00000550851 C10orf95Q9H7T3 257 aa5.82□□□□□ -1.48
LGR5-206ENST00000550851 DNAH5Q8TE73 4624 aa5.8□□□□□ -1.48
LGR5-206ENST00000550851 MT1HL1P0DM35 61 aa5.8□□□□□ -1.48
LGR5-206ENST00000550851 KRTAP4-5Q9BYR2 181 aa5.8□□□□□ -1.48
LGR5-206ENST00000550851 DNAH10Q8IVF4 4471 aa5.8□□□□□ -1.48
LGR5-206ENST00000550851 KRTAP10-4P60372 401 aaPredicted RBP5.79□□□□□ -1.48
LGR5-206ENST00000550851 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
LGR5-206ENST00000550851 PRKDCP78527 4128 aaKnown RBP5.75□□□□□ -1.49
LGR5-206ENST00000550851 DNAH1Q9P2D7 4330 aa5.75□□□□□ -1.49
LGR5-206ENST00000550851 TNP1P09430 55 aa5.74□□□□□ -1.49
LGR5-206ENST00000550851 FAT1Q14517 4588 aa5.73□□□□□ -1.49
LGR5-206ENST00000550851 STARD9Q9P2P6 4700 aa5.73□□□□□ -1.49
LGR5-206ENST00000550851 H3BS24 57 aa5.68□□□□□ -1.5
LGR5-206ENST00000550851 VPS13DQ5THJ4 4388 aa5.62□□□□□ -1.51
LGR5-206ENST00000550851 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
LGR5-206ENST00000550851 DYNC1H1Q14204 4646 aaKnown RBP5.59□□□□□ -1.51
LGR5-206ENST00000550851 NDUFAF8A1L188 74 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms