RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 Q6ZRN7 208 aaPredicted RBP7.32□□□□□ -1.24
NR4A1-215ENST00000550557 Q75L30 129 aa7.31□□□□□ -1.24
NR4A1-215ENST00000550557 CELSR1Q9NYQ6 3014 aa7.29□□□□□ -1.24
NR4A1-215ENST00000550557 LINC01558Q9Y6Z2 57 aa7.28□□□□□ -1.24
NR4A1-215ENST00000550557 ZCCHC13Q8WW36 166 aaKnown RBP7.26□□□□□ -1.25
NR4A1-215ENST00000550557 MMP24-AS1A0A0U1RRL7 71 aa7.26□□□□□ -1.25
NR4A1-215ENST00000550557 Q8N9P0 234 aaPredicted RBP7.25□□□□□ -1.25
NR4A1-215ENST00000550557 LINC00472Q9H8W2 130 aa7.24□□□□□ -1.25
NR4A1-215ENST00000550557 SPENQ96T58 3664 aaKnown RBP7.24□□□□□ -1.25
NR4A1-215ENST00000550557 TENM3Q9P273 2699 aa7.23□□□□□ -1.25
NR4A1-215ENST00000550557 PDZD2O15018 2839 aa7.23□□□□□ -1.25
NR4A1-215ENST00000550557 HRES1P13985 223 aa7.23□□□□□ -1.25
NR4A1-215ENST00000550557 CSAG1Q6PB30 78 aa7.21□□□□□ -1.26
NR4A1-215ENST00000550557 A0A087X002 238 aa7.2□□□□□ -1.26
NR4A1-215ENST00000550557 KRTAP7-1Q8IUC3 87 aa7.2□□□□□ -1.26
NR4A1-215ENST00000550557 SPINK7P58062 85 aa7.19□□□□□ -1.26
NR4A1-215ENST00000550557 LINC00483Q53H64 154 aa7.19□□□□□ -1.26
NR4A1-215ENST00000550557 SVEP1Q4LDE5 3571 aa7.19□□□□□ -1.26
NR4A1-215ENST00000550557 A0A1B0GU33 70 aa7.19□□□□□ -1.26
NR4A1-215ENST00000550557 Q5VV11 94 aa7.18□□□□□ -1.26
NR4A1-215ENST00000550557 TENM1Q9UKZ4 2725 aa7.18□□□□□ -1.26
NR4A1-215ENST00000550557 TENM2Q9NT68 2774 aa7.15□□□□□ -1.27
NR4A1-215ENST00000550557 KRTAP29-1A8MX34 341 aaPredicted RBP7.14□□□□□ -1.27
NR4A1-215ENST00000550557 A0A0D9SG42 100 aa7.14□□□□□ -1.27
NR4A1-215ENST00000550557 H3BS24 57 aa7.13□□□□□ -1.27
NR4A1-215ENST00000550557 CAMK2N1Q7Z7J9 78 aa7.11□□□□□ -1.27
NR4A1-215ENST00000550557 S4R3F8 94 aa7.11□□□□□ -1.27
NR4A1-215ENST00000550557 LUZP6Q538Z0 58 aa7.11□□□□□ -1.27
NR4A1-215ENST00000550557 DMAC1Q96GE9 116 aa7.1□□□□□ -1.27
NR4A1-215ENST00000550557 PKD1L1Q8TDX9 2849 aa7.1□□□□□ -1.27
NR4A1-215ENST00000550557 KRTAP11-1Q8IUC1 163 aa7.1□□□□□ -1.27
NR4A1-215ENST00000550557 Q5W150 140 aa7.08□□□□□ -1.28
NR4A1-215ENST00000550557 PRAC1Q96KF2 57 aa7.04□□□□□ -1.28
NR4A1-215ENST00000550557 VWFP04275 2813 aa7.03□□□□□ -1.28
NR4A1-215ENST00000550557 RPS29P62273 56 aaKnown RBP7.03□□□□□ -1.28
NR4A1-215ENST00000550557 OTOGQ6ZRI0 2925 aa7.03□□□□□ -1.28
NR4A1-215ENST00000550557 KRTAP13-1Q8IUC0 172 aa7.01□□□□□ -1.29
NR4A1-215ENST00000550557 ASB16-AS1Q495Z4 193 aa7.01□□□□□ -1.29
NR4A1-215ENST00000550557 NBPF19A0A087WUL8 3843 aa7.01□□□□□ -1.29
NR4A1-215ENST00000550557 ANK3Q12955 4377 aaKnown RBP7□□□□□ -1.29
NR4A1-215ENST00000550557 R4GN34 69 aa7□□□□□ -1.29
NR4A1-215ENST00000550557 KRTAP13-2Q52LG2 175 aa6.98□□□□□ -1.29
NR4A1-215ENST00000550557 CSMD2Q7Z408 3487 aa6.98□□□□□ -1.29
NR4A1-215ENST00000550557 RPL37P61927 97 aaKnown RBP6.9□□□□□ -1.3
NR4A1-215ENST00000550557 NOTCH2NLQ7Z3S9 236 aa6.9□□□□□ -1.3
NR4A1-215ENST00000550557 ROMO1P60602 79 aa6.85□□□□□ -1.31
NR4A1-215ENST00000550557 H1FX-AS1Q4G0G2 97 aa6.85□□□□□ -1.31
NR4A1-215ENST00000550557 M0QZ58 72 aa6.84□□□□□ -1.31
NR4A1-215ENST00000550557 A0A0A0MQY5 61 aa6.83□□□□□ -1.32
NR4A1-215ENST00000550557 A8MU10 97 aa6.83□□□□□ -1.32
NR4A1-215ENST00000550557 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
NR4A1-215ENST00000550557 A6NN06 94 aa6.81□□□□□ -1.32
NR4A1-215ENST00000550557 SPATA8Q6RVD6 105 aa6.81□□□□□ -1.32
NR4A1-215ENST00000550557 CUBNO60494 3623 aa6.81□□□□□ -1.32
NR4A1-215ENST00000550557 VPS13CQ709C8 3753 aa6.81□□□□□ -1.32
NR4A1-215ENST00000550557 C20orf166-AS1Q96NR2 134 aa6.8□□□□□ -1.32
NR4A1-215ENST00000550557 FBN1P35555 2871 aaKnown RBP6.8□□□□□ -1.32
NR4A1-215ENST00000550557 TGP01266 2768 aa6.79□□□□□ -1.32
NR4A1-215ENST00000550557 ZFHX3Q15911 3703 aa6.76□□□□□ -1.33
NR4A1-215ENST00000550557 ADM2Q7Z4H4 148 aa6.75□□□□□ -1.33
NR4A1-215ENST00000550557 KRTAP1-4P0C5Y4 121 aa6.74□□□□□ -1.33
NR4A1-215ENST00000550557 TRRAPQ9Y4A5 3859 aa6.73□□□□□ -1.33
NR4A1-215ENST00000550557 A0A1B0GVY2 172 aa6.73□□□□□ -1.33
NR4A1-215ENST00000550557 SRRM2Q9UQ35 2752 aaKnown RBP6.71□□□□□ -1.34
NR4A1-215ENST00000550557 ZNF469Q96JG9 3925 aaPredicted RBP6.67□□□□□ -1.34
NR4A1-215ENST00000550557 TPRXLQ17RH7 258 aa6.66□□□□□ -1.34
NR4A1-215ENST00000550557 XP32Q5T750 250 aa6.65□□□□□ -1.34
NR4A1-215ENST00000550557 A8MUU9 505 aa6.64□□□□□ -1.35
NR4A1-215ENST00000550557 AKAP9Q99996 3911 aa6.6□□□□□ -1.35
NR4A1-215ENST00000550557 KRTAP25-1Q3LHN0 102 aa6.6□□□□□ -1.35
NR4A1-215ENST00000550557 KRTAP16-1A8MUX0 517 aa6.54□□□□□ -1.36
NR4A1-215ENST00000550557 KRTAP10-8P60410 259 aa6.53□□□□□ -1.36
NR4A1-215ENST00000550557 FBN3Q75N90 2809 aa6.5□□□□□ -1.37
NR4A1-215ENST00000550557 KRTAP13-3Q3SY46 172 aa6.49□□□□□ -1.37
NR4A1-215ENST00000550557 HUWE1Q7Z6Z7 4374 aaKnown RBP6.45□□□□□ -1.38
NR4A1-215ENST00000550557 KRTAP10-10P60014 251 aa6.44□□□□□ -1.38
NR4A1-215ENST00000550557 NDUFAF8A1L188 74 aa6.39□□□□□ -1.39
NR4A1-215ENST00000550557 MEGF8Q7Z7M0 2845 aa6.33□□□□□ -1.4
NR4A1-215ENST00000550557 H0YAA0 97 aa6.3□□□□□ -1.4
NR4A1-215ENST00000550557 TNP1P09430 55 aa6.28□□□□□ -1.4
NR4A1-215ENST00000550557 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
NR4A1-215ENST00000550557 COL7A1Q02388 2944 aa6.26□□□□□ -1.41
NR4A1-215ENST00000550557 DNAH9Q9NYC9 4486 aa6.25□□□□□ -1.41
NR4A1-215ENST00000550557 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
NR4A1-215ENST00000550557 KRTAP4-5Q9BYR2 181 aa6.11□□□□□ -1.43
NR4A1-215ENST00000550557 PLECQ15149 4684 aaKnown RBP6.1□□□□□ -1.43
NR4A1-215ENST00000550557 MT1HL1P0DM35 61 aa6.1□□□□□ -1.43
NR4A1-215ENST00000550557 P0C880 135 aa6.09□□□□□ -1.43
NR4A1-215ENST00000550557 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.44
NR4A1-215ENST00000550557 DNAH1Q9P2D7 4330 aa6.06□□□□□ -1.44
NR4A1-215ENST00000550557 CSMD3Q7Z407 3707 aa6.04□□□□□ -1.44
NR4A1-215ENST00000550557 VPS13DQ5THJ4 4388 aa6.04□□□□□ -1.44
NR4A1-215ENST00000550557 DNAH10Q8IVF4 4471 aa6.04□□□□□ -1.44
NR4A1-215ENST00000550557 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
NR4A1-215ENST00000550557 ALMS1Q8TCU4 4167 aa6□□□□□ -1.45
NR4A1-215ENST00000550557 DNAH3Q8TD57 4116 aa6□□□□□ -1.45
NR4A1-215ENST00000550557 DNAH17Q9UFH2 4485 aa5.98□□□□□ -1.45
NR4A1-215ENST00000550557 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
NR4A1-215ENST00000550557 ANK2Q01484 3957 aa5.97□□□□□ -1.45
NR4A1-215ENST00000550557 CMYA5Q8N3K9 4069 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms