RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 HSPG2P98160 4391 aa2□□□□□ -2.09
HCFC2-204ENST00000550335 A0A096LNI7 61 aa2□□□□□ -2.09
HCFC2-204ENST00000550335 NUPR1O60356 82 aa2□□□□□ -2.09
HCFC2-204ENST00000550335 SPINK6Q6UWN8 80 aa2□□□□□ -2.09
HCFC2-204ENST00000550335 FAM19A2Q8N3H0 131 aa2□□□□□ -2.09
HCFC2-204ENST00000550335 APOBP04114 4563 aaKnown RBP2□□□□□ -2.09
HCFC2-204ENST00000550335 ABCA13Q86UQ4 5058 aa2□□□□□ -2.09
HCFC2-204ENST00000550335 LOC105371267A0A1B0GV96 52 aa1.99□□□□□ -2.09
HCFC2-204ENST00000550335 APOC3P02656 99 aa1.99□□□□□ -2.09
HCFC2-204ENST00000550335 CKS1BP61024 79 aa1.99□□□□□ -2.09
HCFC2-204ENST00000550335 RPS28P62857 69 aaKnown RBP1.99□□□□□ -2.09
HCFC2-204ENST00000550335 C9orf116Q5BN46 136 aaPredicted RBP1.99□□□□□ -2.09
HCFC2-204ENST00000550335 SFTA2Q6UW10 78 aa1.99□□□□□ -2.09
HCFC2-204ENST00000550335 SMCO4Q9NRQ5 59 aa1.99□□□□□ -2.09
HCFC2-204ENST00000550335 C6orf48Q9UBA6 75 aa1.99□□□□□ -2.09
HCFC2-204ENST00000550335 C22orf24Q9Y442 160 aa1.99□□□□□ -2.09
HCFC2-204ENST00000550335 TRAV23DV6A0A075B6W5 121 aa1.98□□□□□ -2.09
HCFC2-204ENST00000550335 A0A1B0GX51 115 aa1.98□□□□□ -2.09
HCFC2-204ENST00000550335 F8VRH5 84 aa1.98□□□□□ -2.09
HCFC2-204ENST00000550335 HBDP02042 147 aa1.98□□□□□ -2.09
HCFC2-204ENST00000550335 S100A1P23297 94 aa1.98□□□□□ -2.09
HCFC2-204ENST00000550335 COX17Q14061 63 aa1.98□□□□□ -2.09
HCFC2-204ENST00000550335 C18orf32Q8TCD1 76 aa1.98□□□□□ -2.09
HCFC2-204ENST00000550335 LINC00526Q96FQ7 95 aa1.98□□□□□ -2.09
HCFC2-204ENST00000550335 LINC01600Q96MT4 127 aa1.98□□□□□ -2.09
HCFC2-204ENST00000550335 CDKN2A-AS1Q9UH64 79 aa1.98□□□□□ -2.09
HCFC2-204ENST00000550335 C9JAW5 83 aa1.97□□□□□ -2.09
HCFC2-204ENST00000550335 IGLC3P0DOY3 106 aa1.97□□□□□ -2.09
HCFC2-204ENST00000550335 SPANXCQ9NY87 97 aa1.97□□□□□ -2.09
HCFC2-204ENST00000550335 LINC00587B1AMM8 73 aa1.96□□□□□ -2.1
HCFC2-204ENST00000550335 JMJD7-PLA2G4BH0Y9G9 81 aa1.96□□□□□ -2.1
HCFC2-204ENST00000550335 MT1HL1P0DM35 61 aa1.96□□□□□ -2.1
HCFC2-204ENST00000550335 COX7B2Q8TF08 81 aa1.96□□□□□ -2.1
HCFC2-204ENST00000550335 TOMM7Q9P0U1 55 aa1.96□□□□□ -2.1
HCFC2-204ENST00000550335 FAT1Q14517 4588 aa1.96□□□□□ -2.1
HCFC2-204ENST00000550335 BAGE3Q86Y29 109 aa1.95□□□□□ -2.1
HCFC2-204ENST00000550335 IFI27L1Q96BM0 104 aa1.95□□□□□ -2.1
HCFC2-204ENST00000550335 FLG2Q5D862 2391 aaPredicted RBP1.94□□□□□ -2.1
HCFC2-204ENST00000550335 DNAH8Q96JB1 4490 aa1.94□□□□□ -2.1
HCFC2-204ENST00000550335 SPINK8P0C7L1 97 aa1.94□□□□□ -2.1
HCFC2-204ENST00000550335 TMEM170BQ5T4T1 132 aa1.94□□□□□ -2.1
HCFC2-204ENST00000550335 LIMD2Q9BT23 127 aa1.94□□□□□ -2.1
HCFC2-204ENST00000550335 HSPB8Q9UJY1 196 aa1.94□□□□□ -2.1
HCFC2-204ENST00000550335 ERG28Q9UKR5 140 aa1.94□□□□□ -2.1
HCFC2-204ENST00000550335 DMBT1Q9UGM3 2413 aaPredicted RBP1.93□□□□□ -2.1
HCFC2-204ENST00000550335 SRRM2Q9UQ35 2752 aaKnown RBP1.93□□□□□ -2.1
HCFC2-204ENST00000550335 BCE1O60756 84 aa1.93□□□□□ -2.1
HCFC2-204ENST00000550335 LEPROTL1O95214 131 aa1.93□□□□□ -2.1
HCFC2-204ENST00000550335 PLNP26678 52 aa1.93□□□□□ -2.1
HCFC2-204ENST00000550335 PMCHL1Q16048 86 aa1.93□□□□□ -2.1
HCFC2-204ENST00000550335 MYCBP2O75592 4640 aa1.92□□□□□ -2.1
HCFC2-204ENST00000550335 MYMXA0A1B0GTQ4 84 aa1.92□□□□□ -2.1
HCFC2-204ENST00000550335 UQCRQO14949 82 aa1.92□□□□□ -2.1
HCFC2-204ENST00000550335 AKR1D1P51857 326 aa1.92□□□□□ -2.1
HCFC2-204ENST00000550335 Q5XG85 94 aa1.92□□□□□ -2.1
HCFC2-204ENST00000550335 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
HCFC2-204ENST00000550335 VPS13BQ7Z7G8 4022 aa1.92□□□□□ -2.1
HCFC2-204ENST00000550335 NCR3O14931 201 aa1.91□□□□□ -2.1
HCFC2-204ENST00000550335 IGKCP01834 107 aa1.91□□□□□ -2.1
HCFC2-204ENST00000550335 SPRR1AP35321 89 aa1.91□□□□□ -2.1
HCFC2-204ENST00000550335 LINC00158P58513 81 aa1.91□□□□□ -2.1
HCFC2-204ENST00000550335 S100A12P80511 92 aa1.91□□□□□ -2.1
HCFC2-204ENST00000550335 MEIG1Q5JSS6 88 aa1.91□□□□□ -2.1
HCFC2-204ENST00000550335 HERC1Q15751 4861 aa1.9□□□□□ -2.11
HCFC2-204ENST00000550335 SYS1-DBNDD2H3BUS1 97 aa1.9□□□□□ -2.11
HCFC2-204ENST00000550335 KCNQ1DNQ9H478 68 aa1.9□□□□□ -2.11
HCFC2-204ENST00000550335 NDUFA12Q9UI09 145 aa1.9□□□□□ -2.11
HCFC2-204ENST00000550335 LRP1Q07954 4544 aaKnown RBP1.89□□□□□ -2.11
HCFC2-204ENST00000550335 SMIM13P0DJ93 91 aa1.89□□□□□ -2.11
HCFC2-204ENST00000550335 LINC01545Q5VT33 79 aa1.89□□□□□ -2.11
HCFC2-204ENST00000550335 C20orf202A1L168 122 aa1.88□□□□□ -2.11
HCFC2-204ENST00000550335 SPATA45Q537H7 98 aa1.88□□□□□ -2.11
HCFC2-204ENST00000550335 SPAG11AQ6PDA7 123 aa1.88□□□□□ -2.11
HCFC2-204ENST00000550335 COPS9Q8WXC6 57 aa1.88□□□□□ -2.11
HCFC2-204ENST00000550335 TRBV10-3A0A0K0K1G6 114 aa1.87□□□□□ -2.11
HCFC2-204ENST00000550335 ETDCA0A1B0GVM5 59 aa1.87□□□□□ -2.11
HCFC2-204ENST00000550335 C3orf79P0CE67 100 aa1.87□□□□□ -2.11
HCFC2-204ENST00000550335 IFITM1P13164 125 aa1.87□□□□□ -2.11
HCFC2-204ENST00000550335 RPS29P62273 56 aaKnown RBP1.87□□□□□ -2.11
HCFC2-204ENST00000550335 PRLHP81277 87 aa1.87□□□□□ -2.11
HCFC2-204ENST00000550335 SPRR4Q96PI1 79 aa1.87□□□□□ -2.11
HCFC2-204ENST00000550335 PMCHL2Q9BQD1 86 aa1.87□□□□□ -2.11
HCFC2-204ENST00000550335 SPANXDQ9BXN6 97 aa1.87□□□□□ -2.11
HCFC2-204ENST00000550335 FAT3Q8TDW7 4589 aa1.86□□□□□ -2.11
HCFC2-204ENST00000550335 SPINK1P00995 79 aa1.86□□□□□ -2.11
HCFC2-204ENST00000550335 OCIAD2Q56VL3 154 aa1.86□□□□□ -2.11
HCFC2-204ENST00000550335 S100A7L2Q5SY68 101 aa1.86□□□□□ -2.11
HCFC2-204ENST00000550335 Q6ZRX8 168 aa1.86□□□□□ -2.11
HCFC2-204ENST00000550335 SSBP3-AS1Q7Z2R9 100 aa1.86□□□□□ -2.11
HCFC2-204ENST00000550335 LINC00308Q8TCZ7 52 aa1.86□□□□□ -2.11
HCFC2-204ENST00000550335 HMCN2Q8NDA2 5059 aa1.86□□□□□ -2.11
HCFC2-204ENST00000550335 ZNF815PA8K554 130 aa1.85□□□□□ -2.11
HCFC2-204ENST00000550335 SPRR1BP22528 89 aa1.85□□□□□ -2.11
HCFC2-204ENST00000550335 KRTDAPP60985 99 aa1.85□□□□□ -2.11
HCFC2-204ENST00000550335 TRAV13-2A0A0B4J235 113 aa1.84□□□□□ -2.11
HCFC2-204ENST00000550335 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
HCFC2-204ENST00000550335 TNXBP22105 4242 aa1.83□□□□□ -2.12
HCFC2-204ENST00000550335 PKHD1L1Q86WI1 4243 aa1.83□□□□□ -2.12
HCFC2-204ENST00000550335 DLEU1O43261 78 aa1.83□□□□□ -2.12
HCFC2-204ENST00000550335 SMIM6P0DI80 62 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 945.3 ms