RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-206ENST00000550285 A0A0U1RQV1 116 aa8.5□□□□□ -1.05
PDE1B-206ENST00000550285 SSBP3-AS1Q7Z2R9 100 aa8.49□□□□□ -1.05
PDE1B-206ENST00000550285 SNURFQ9Y675 71 aa8.49□□□□□ -1.05
PDE1B-206ENST00000550285 Q8N9L7 120 aa8.47□□□□□ -1.05
PDE1B-206ENST00000550285 BPY2O14599 106 aa8.46□□□□□ -1.05
PDE1B-206ENST00000550285 PRR15Q8IV56 129 aa8.46□□□□□ -1.05
PDE1B-206ENST00000550285 LRP1Q07954 4544 aaKnown RBP8.46□□□□□ -1.05
PDE1B-206ENST00000550285 IGKV4-1P06312 121 aa8.46□□□□□ -1.06
PDE1B-206ENST00000550285 TYMSOSQ8TAI1 123 aa8.45□□□□□ -1.06
PDE1B-206ENST00000550285 PMAIP1Q13794 54 aa8.44□□□□□ -1.06
PDE1B-206ENST00000550285 LINC00472Q9H8W2 130 aa8.43□□□□□ -1.06
PDE1B-206ENST00000550285 DSCR10P59022 87 aa8.42□□□□□ -1.06
PDE1B-206ENST00000550285 Q96NJ1 140 aa8.42□□□□□ -1.06
PDE1B-206ENST00000550285 CD164Q04900 197 aa8.41□□□□□ -1.06
PDE1B-206ENST00000550285 Q8N1X5 172 aa8.41□□□□□ -1.06
PDE1B-206ENST00000550285 TMEM254Q8TBM7 123 aa8.41□□□□□ -1.06
PDE1B-206ENST00000550285 K7EQZ3 153 aa8.38□□□□□ -1.07
PDE1B-206ENST00000550285 FAT3Q8TDW7 4589 aa8.38□□□□□ -1.07
PDE1B-206ENST00000550285 MPLKIPQ8TAP9 179 aa8.38□□□□□ -1.07
PDE1B-206ENST00000550285 BIRC6Q9NR09 4857 aa8.37□□□□□ -1.07
PDE1B-206ENST00000550285 TNXBP22105 4242 aa8.36□□□□□ -1.07
PDE1B-206ENST00000550285 MYCBP2O75592 4640 aa8.36□□□□□ -1.07
PDE1B-206ENST00000550285 FLG2Q5D862 2391 aaPredicted RBP8.36□□□□□ -1.07
PDE1B-206ENST00000550285 KRTAP4-5Q9BYR2 181 aa8.35□□□□□ -1.07
PDE1B-206ENST00000550285 Q1T7F1 81 aa8.34□□□□□ -1.07
PDE1B-206ENST00000550285 LINC00304Q8N9R0 145 aa8.34□□□□□ -1.07
PDE1B-206ENST00000550285 C4orf48Q5BLP8 95 aa8.34□□□□□ -1.07
PDE1B-206ENST00000550285 OCR1Q9BZK8 76 aa8.34□□□□□ -1.07
PDE1B-206ENST00000550285 SPINK1P00995 79 aa8.3□□□□□ -1.08
PDE1B-206ENST00000550285 A8MWP4 228 aa8.3□□□□□ -1.08
PDE1B-206ENST00000550285 hDV103S1A0JD37 113 aa8.29□□□□□ -1.08
PDE1B-206ENST00000550285 ABCA13Q86UQ4 5058 aa8.28□□□□□ -1.08
PDE1B-206ENST00000550285 KRTAP10-8P60410 259 aa8.28□□□□□ -1.08
PDE1B-206ENST00000550285 ASB16-AS1Q495Z4 193 aa8.28□□□□□ -1.08
PDE1B-206ENST00000550285 HERC2O95714 4834 aa8.27□□□□□ -1.09
PDE1B-206ENST00000550285 LIMD2Q9BT23 127 aa8.26□□□□□ -1.09
PDE1B-206ENST00000550285 SPAG11AQ6PDA7 123 aa8.25□□□□□ -1.09
PDE1B-206ENST00000550285 NOTCH2NLQ7Z3S9 236 aa8.25□□□□□ -1.09
PDE1B-206ENST00000550285 IGHV6-1A0A0B4J1U7 121 aa8.24□□□□□ -1.09
PDE1B-206ENST00000550285 HCG22E2RYF7 251 aa8.24□□□□□ -1.09
PDE1B-206ENST00000550285 WFDC13Q8IUB5 93 aa8.24□□□□□ -1.09
PDE1B-206ENST00000550285 A0A1B0GVX0 72 aa8.22□□□□□ -1.09
PDE1B-206ENST00000550285 NDUFB1O75438 58 aa8.22□□□□□ -1.09
PDE1B-206ENST00000550285 MT1HL1P0DM35 61 aa8.21□□□□□ -1.09
PDE1B-206ENST00000550285 RPS29P62273 56 aaKnown RBP8.21□□□□□ -1.1
PDE1B-206ENST00000550285 MMP24-AS1A0A0U1RRL7 71 aa8.2□□□□□ -1.1
PDE1B-206ENST00000550285 RETNLBQ9BQ08 111 aa8.2□□□□□ -1.1
PDE1B-206ENST00000550285 KRTAP29-1A8MX34 341 aaPredicted RBP8.18□□□□□ -1.1
PDE1B-206ENST00000550285 C1orf64Q8NEQ6 169 aa8.18□□□□□ -1.1
PDE1B-206ENST00000550285 C8orf17Q9NRJ1 99 aa8.18□□□□□ -1.1
PDE1B-206ENST00000550285 DMBT1Q9UGM3 2413 aaPredicted RBP8.17□□□□□ -1.1
PDE1B-206ENST00000550285 CASC2Q6XLA1 102 aa8.17□□□□□ -1.1
PDE1B-206ENST00000550285 CYP4F30PQ9H0H9 118 aa8.17□□□□□ -1.1
PDE1B-206ENST00000550285 TRAV22A0A0B4J277 110 aa8.16□□□□□ -1.1
PDE1B-206ENST00000550285 ZCCHC13Q8WW36 166 aaKnown RBP8.14□□□□□ -1.11
PDE1B-206ENST00000550285 KTN1-AS1Q86SY8 53 aa8.13□□□□□ -1.11
PDE1B-206ENST00000550285 PSPHP1O15172 72 aa8.11□□□□□ -1.11
PDE1B-206ENST00000550285 LINC00313P59037 77 aa8.1□□□□□ -1.11
PDE1B-206ENST00000550285 MRPL34Q9BQ48 92 aaKnown RBP8.07□□□□□ -1.12
PDE1B-206ENST00000550285 RBM12B-AS1Q9P1G2 102 aa8.07□□□□□ -1.12
PDE1B-206ENST00000550285 C8orf87E5RJ46 101 aa8.06□□□□□ -1.12
PDE1B-206ENST00000550285 NDUFS5O43920 106 aa8.06□□□□□ -1.12
PDE1B-206ENST00000550285 PCLOQ9Y6V0 5065 aa8.06□□□□□ -1.12
PDE1B-206ENST00000550285 Q5VV11 94 aa8.06□□□□□ -1.12
PDE1B-206ENST00000550285 KRTAP16-1A8MUX0 517 aa8.05□□□□□ -1.12
PDE1B-206ENST00000550285 C9orf92A6NGG3 77 aa8.05□□□□□ -1.12
PDE1B-206ENST00000550285 A8MUN3 132 aa8.05□□□□□ -1.12
PDE1B-206ENST00000550285 MP68P56378 58 aa8.04□□□□□ -1.12
PDE1B-206ENST00000550285 ATP11AUNQ6ZP68 121 aa8.03□□□□□ -1.12
PDE1B-206ENST00000550285 H3BPC8 53 aa8.01□□□□□ -1.13
PDE1B-206ENST00000550285 H0Y9P7 68 aa7.99□□□□□ -1.13
PDE1B-206ENST00000550285 LINC00208Q96KT6 92 aa7.98□□□□□ -1.13
PDE1B-206ENST00000550285 Q8N9P0 234 aaPredicted RBP7.97□□□□□ -1.13
PDE1B-206ENST00000550285 SPANXA2-OT1Q8N9U9 137 aa7.97□□□□□ -1.13
PDE1B-206ENST00000550285 TP53AIP1Q9HCN2 124 aa7.97□□□□□ -1.13
PDE1B-206ENST00000550285 A8MU10 97 aa7.96□□□□□ -1.14
PDE1B-206ENST00000550285 CHKB-CPT1BH3BT56 60 aa7.96□□□□□ -1.14
PDE1B-206ENST00000550285 A6NN06 94 aa7.95□□□□□ -1.14
PDE1B-206ENST00000550285 Q5W150 140 aa7.95□□□□□ -1.14
PDE1B-206ENST00000550285 J3QL48 77 aa7.95□□□□□ -1.14
PDE1B-206ENST00000550285 IGLV7-46A0A075B6I9 117 aa7.94□□□□□ -1.14
PDE1B-206ENST00000550285 Q75L30 129 aa7.94□□□□□ -1.14
PDE1B-206ENST00000550285 PRR4Q16378 134 aa7.93□□□□□ -1.14
PDE1B-206ENST00000550285 LOC101927531A0A1B0GV80 90 aa7.93□□□□□ -1.14
PDE1B-206ENST00000550285 LCA10Q71F78 164 aa7.9□□□□□ -1.14
PDE1B-206ENST00000550285 LPAP08519 4548 aa7.89□□□□□ -1.15
PDE1B-206ENST00000550285 KRTAP13-3Q3SY46 172 aa7.89□□□□□ -1.15
PDE1B-206ENST00000550285 C7orf65Q6ZTY9 151 aa7.89□□□□□ -1.15
PDE1B-206ENST00000550285 CDC42SE1Q9NRR8 79 aa7.89□□□□□ -1.15
PDE1B-206ENST00000550285 SPTSSBQ8NFR3 76 aa7.88□□□□□ -1.15
PDE1B-206ENST00000550285 PRR15LQ9BU68 103 aa7.88□□□□□ -1.15
PDE1B-206ENST00000550285 A8MUU9 505 aa7.86□□□□□ -1.15
PDE1B-206ENST00000550285 C20orf166-AS1Q96NR2 134 aa7.86□□□□□ -1.15
PDE1B-206ENST00000550285 A6NED7 52 aa7.84□□□□□ -1.15
PDE1B-206ENST00000550285 HERC1Q15751 4861 aa7.84□□□□□ -1.15
PDE1B-206ENST00000550285 XP32Q5T750 250 aa7.82□□□□□ -1.16
PDE1B-206ENST00000550285 LRP2P98164 4655 aa7.81□□□□□ -1.16
PDE1B-206ENST00000550285 PCOTHQ58A44 107 aa7.77□□□□□ -1.17
PDE1B-206ENST00000550285 TPRXLQ17RH7 258 aa7.76□□□□□ -1.17
PDE1B-206ENST00000550285 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms