RNA–Protein interactions for RNA: ENST00000549790.1

EEA1-204, Transcript of early endosome antigen 1, humanhuman

TSL 4

Gene EEA1, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-204ENST00000549790 WNK1Q9H4A3 2382 aa0.3□□□□□ -2.36
EEA1-204ENST00000549790 PTPN13Q12923 2485 aa0.29□□□□□ -2.36
EEA1-204ENST00000549790 A8MTW9 85 aa0.29□□□□□ -2.36
EEA1-204ENST00000549790 RPL39P62891 51 aaKnown RBP0.29□□□□□ -2.36
EEA1-204ENST00000549790 CLPSL2Q6UWE3 100 aa0.29□□□□□ -2.36
EEA1-204ENST00000549790 TNXBP22105 4242 aa0.29□□□□□ -2.36
EEA1-204ENST00000549790 PDZD2O15018 2839 aa0.29□□□□□ -2.36
EEA1-204ENST00000549790 PRKDCP78527 4128 aaKnown RBP0.29□□□□□ -2.36
EEA1-204ENST00000549790 CHD7Q9P2D1 2997 aa0.29□□□□□ -2.36
EEA1-204ENST00000549790 SETXQ7Z333 2677 aaKnown RBP0.29□□□□□ -2.36
EEA1-204ENST00000549790 FLNCQ14315 2725 aa0.29□□□□□ -2.36
EEA1-204ENST00000549790 NF1P21359 2839 aa0.28□□□□□ -2.36
EEA1-204ENST00000549790 RIF1Q5UIP0 2472 aaKnown RBP0.28□□□□□ -2.36
EEA1-204ENST00000549790 COL6A5A8TX70 2615 aa0.28□□□□□ -2.36
EEA1-204ENST00000549790 M0R2T5 61 aa0.28□□□□□ -2.36
EEA1-204ENST00000549790 ACANP16112 2415 aa0.28□□□□□ -2.36
EEA1-204ENST00000549790 DMBT1Q9UGM3 2413 aaPredicted RBP0.28□□□□□ -2.36
EEA1-204ENST00000549790 ZZEF1O43149 2961 aa0.28□□□□□ -2.36
EEA1-204ENST00000549790 FAT2Q9NYQ8 4349 aa0.28□□□□□ -2.37
EEA1-204ENST00000549790 MDN1Q9NU22 5596 aa0.28□□□□□ -2.37
EEA1-204ENST00000549790 APC2O95996 2303 aa0.27□□□□□ -2.37
EEA1-204ENST00000549790 M0QY20 66 aa0.27□□□□□ -2.37
EEA1-204ENST00000549790 DEFB135Q30KP9 77 aa0.27□□□□□ -2.37
EEA1-204ENST00000549790 RPL39LQ96EH5 51 aaKnown RBP0.27□□□□□ -2.37
EEA1-204ENST00000549790 ARHGAP5-AS1Q96IT6 56 aa0.27□□□□□ -2.37
EEA1-204ENST00000549790 FAM186AA6NE01 2351 aa0.27□□□□□ -2.37
EEA1-204ENST00000549790 NSD1Q96L73 2696 aaPredicted RBP0.27□□□□□ -2.37
EEA1-204ENST00000549790 VPS13BQ7Z7G8 4022 aa0.27□□□□□ -2.37
EEA1-204ENST00000549790 GCN1Q92616 2671 aaKnown RBP0.26□□□□□ -2.37
EEA1-204ENST00000549790 TENM2Q9NT68 2774 aa0.26□□□□□ -2.37
EEA1-204ENST00000549790 H0YGG7 62 aa0.26□□□□□ -2.37
EEA1-204ENST00000549790 M0QZ58 72 aa0.26□□□□□ -2.37
EEA1-204ENST00000549790 LINC01590Q5TEZ4 76 aa0.26□□□□□ -2.37
EEA1-204ENST00000549790 U3KQA8 63 aa0.26□□□□□ -2.37
EEA1-204ENST00000549790 MUC5ACP98088 5654 aa0.26□□□□□ -2.37
EEA1-204ENST00000549790 LRRK2Q5S007 2527 aa0.26□□□□□ -2.37
EEA1-204ENST00000549790 FLNBO75369 2602 aaKnown RBP0.26□□□□□ -2.37
EEA1-204ENST00000549790 TACC2O95359 2948 aa0.26□□□□□ -2.37
EEA1-204ENST00000549790 KMT2AQ03164 3969 aa0.26□□□□□ -2.37
EEA1-204ENST00000549790 LRP1Q07954 4544 aaKnown RBP0.26□□□□□ -2.37
EEA1-204ENST00000549790 SPENQ96T58 3664 aaKnown RBP0.25□□□□□ -2.37
EEA1-204ENST00000549790 MTORP42345 2549 aa0.25□□□□□ -2.37
EEA1-204ENST00000549790 CCDC168Q8NDH2 2452 aa0.25□□□□□ -2.37
EEA1-204ENST00000549790 C9orf92A6NGG3 77 aa0.25□□□□□ -2.37
EEA1-204ENST00000549790 PRM1P04553 51 aa0.25□□□□□ -2.37
EEA1-204ENST00000549790 COL12A1Q99715 3063 aa0.25□□□□□ -2.37
EEA1-204ENST00000549790 DCHS2Q6V1P9 2916 aa0.25□□□□□ -2.37
EEA1-204ENST00000549790 NBEAL2Q6ZNJ1 2754 aa0.25□□□□□ -2.37
EEA1-204ENST00000549790 STAB1Q9NY15 2570 aa0.25□□□□□ -2.37
EEA1-204ENST00000549790 FRYQ5TBA9 3013 aa0.24□□□□□ -2.37
EEA1-204ENST00000549790 USP9YO00507 2555 aaPredicted RBP0.24□□□□□ -2.37
EEA1-204ENST00000549790 SPTBN4Q9H254 2564 aa0.24□□□□□ -2.37
EEA1-204ENST00000549790 ANKHD1Q8IWZ3 2542 aaKnown RBP0.24□□□□□ -2.37
EEA1-204ENST00000549790 HIVEP1P15822 2718 aa0.24□□□□□ -2.37
EEA1-204ENST00000549790 IGSF10Q6WRI0 2623 aa0.24□□□□□ -2.37
EEA1-204ENST00000549790 SPG11Q96JI7 2443 aa0.24□□□□□ -2.37
EEA1-204ENST00000549790 CUBNO60494 3623 aa0.24□□□□□ -2.37
EEA1-204ENST00000549790 COL7A1Q02388 2944 aa0.24□□□□□ -2.37
EEA1-204ENST00000549790 ANKRD11Q6UB99 2663 aaPredicted RBP0.23□□□□□ -2.37
EEA1-204ENST00000549790 LAMA5O15230 3695 aa0.23□□□□□ -2.37
EEA1-204ENST00000549790 NCOR2Q9Y618 2525 aa0.23□□□□□ -2.37
EEA1-204ENST00000549790 DMXL1Q9Y485 3027 aa0.23□□□□□ -2.37
EEA1-204ENST00000549790 CRYBG3Q68DQ2 2970 aa0.23□□□□□ -2.37
EEA1-204ENST00000549790 NBEAQ8NFP9 2946 aa0.23□□□□□ -2.37
EEA1-204ENST00000549790 HUWE1Q7Z6Z7 4374 aaKnown RBP0.23□□□□□ -2.37
EEA1-204ENST00000549790 TNP1P09430 55 aa0.23□□□□□ -2.37
EEA1-204ENST00000549790 PRCDQ00LT1 54 aa0.23□□□□□ -2.37
EEA1-204ENST00000549790 LEAP2Q969E1 77 aa0.23□□□□□ -2.37
EEA1-204ENST00000549790 UTP20O75691 2785 aaKnown RBP0.23□□□□□ -2.37
EEA1-204ENST00000549790 CACNA1AO00555 2505 aa0.23□□□□□ -2.37
EEA1-204ENST00000549790 HRNRQ86YZ3 2850 aaPredicted RBP0.23□□□□□ -2.37
EEA1-204ENST00000549790 SONP18583 2426 aaKnown RBP0.23□□□□□ -2.37
EEA1-204ENST00000549790 CEP250Q9BV73 2442 aa0.23□□□□□ -2.37
EEA1-204ENST00000549790 ZFHX4Q86UP3 3567 aa0.22□□□□□ -2.37
EEA1-204ENST00000549790 ITPR3Q14573 2671 aa0.22□□□□□ -2.37
EEA1-204ENST00000549790 NBPF19A0A087WUL8 3843 aa0.22□□□□□ -2.37
EEA1-204ENST00000549790 ACACBO00763 2458 aa0.22□□□□□ -2.37
EEA1-204ENST00000549790 SPRR2DP22532 72 aa0.22□□□□□ -2.37
EEA1-204ENST00000549790 TOMM7Q9P0U1 55 aa0.22□□□□□ -2.37
EEA1-204ENST00000549790 DNAH11Q96DT5 4516 aa0.22□□□□□ -2.37
EEA1-204ENST00000549790 MGAQ8IWI9 3026 aa0.22□□□□□ -2.37
EEA1-204ENST00000549790 USP9XQ93008 2570 aaPredicted RBP0.22□□□□□ -2.37
EEA1-204ENST00000549790 SACSQ9NZJ4 4579 aa0.22□□□□□ -2.37
EEA1-204ENST00000549790 TLN2Q9Y4G6 2542 aa0.22□□□□□ -2.37
EEA1-204ENST00000549790 SPTBN5Q9NRC6 3674 aaKnown RBP0.22□□□□□ -2.37
EEA1-204ENST00000549790 TEP1Q99973 2627 aaKnown RBP0.21□□□□□ -2.38
EEA1-204ENST00000549790 RANBP2P49792 3224 aaKnown RBP0.21□□□□□ -2.38
EEA1-204ENST00000549790 MYO18BQ8IUG5 2567 aa0.21□□□□□ -2.38
EEA1-204ENST00000549790 DNAH3Q8TD57 4116 aa0.21□□□□□ -2.38
EEA1-204ENST00000549790 K7EIM0 57 aa0.21□□□□□ -2.38
EEA1-204ENST00000549790 SPRR2BP35325 72 aa0.21□□□□□ -2.38
EEA1-204ENST00000549790 FLNAP21333 2647 aaKnown RBP0.21□□□□□ -2.38
EEA1-204ENST00000549790 CELSR3Q9NYQ7 3312 aa0.21□□□□□ -2.38
EEA1-204ENST00000549790 FASNP49327 2511 aaKnown RBP0.21□□□□□ -2.38
EEA1-204ENST00000549790 ZANQ9Y493 2812 aa0.2□□□□□ -2.38
EEA1-204ENST00000549790 TGP01266 2768 aa0.2□□□□□ -2.38
EEA1-204ENST00000549790 KALRNO60229 2985 aa0.2□□□□□ -2.38
EEA1-204ENST00000549790 FLGP20930 4061 aaPredicted RBP0.2□□□□□ -2.38
EEA1-204ENST00000549790 H3BNG1 76 aa0.2□□□□□ -2.38
EEA1-204ENST00000549790 MT1AP04731 61 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms