RNA–Protein interactions for RNA: ENST00000549621.5

RITA1-202, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RITA1, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-202ENST00000549621 NOTCH2NLQ7Z3S9 236 aa12.53□□□□□ -0.4
RITA1-202ENST00000549621 ZCCHC13Q8WW36 166 aaKnown RBP12.5□□□□□ -0.41
RITA1-202ENST00000549621 FAM236DA0A1B0GTK5 79 aa12.49□□□□□ -0.41
RITA1-202ENST00000549621 FAM236CP0DP71 79 aa12.49□□□□□ -0.41
RITA1-202ENST00000549621 C1orf195Q5TG92 126 aa12.49□□□□□ -0.41
RITA1-202ENST00000549621 PRR26Q8N8Z3 221 aa12.49□□□□□ -0.41
RITA1-202ENST00000549621 LIMD2Q9BT23 127 aa12.47□□□□□ -0.41
RITA1-202ENST00000549621 MRPL34Q9BQ48 92 aaKnown RBP12.45□□□□□ -0.42
RITA1-202ENST00000549621 FAT1Q14517 4588 aa12.44□□□□□ -0.42
RITA1-202ENST00000549621 H0Y9P7 68 aa12.44□□□□□ -0.42
RITA1-202ENST00000549621 MP68P56378 58 aa12.44□□□□□ -0.42
RITA1-202ENST00000549621 C4orf48Q5BLP8 95 aa12.44□□□□□ -0.42
RITA1-202ENST00000549621 SPINK1P00995 79 aa12.42□□□□□ -0.42
RITA1-202ENST00000549621 C8orf87E5RJ46 101 aa12.4□□□□□ -0.42
RITA1-202ENST00000549621 LINC00304Q8N9R0 145 aa12.39□□□□□ -0.43
RITA1-202ENST00000549621 TP53AIP1Q9HCN2 124 aa12.39□□□□□ -0.43
RITA1-202ENST00000549621 TRAV22A0A0B4J277 110 aa12.38□□□□□ -0.43
RITA1-202ENST00000549621 LINC00208Q96KT6 92 aa12.38□□□□□ -0.43
RITA1-202ENST00000549621 H3BPC8 53 aa12.37□□□□□ -0.43
RITA1-202ENST00000549621 NDUFS5O43920 106 aa12.37□□□□□ -0.43
RITA1-202ENST00000549621 RYR3Q15413 4870 aa12.37□□□□□ -0.43
RITA1-202ENST00000549621 RPS28P62857 69 aaKnown RBP12.36□□□□□ -0.43
RITA1-202ENST00000549621 ATP5EP56381 51 aaPredicted RBP12.35□□□□□ -0.43
RITA1-202ENST00000549621 RPS29P62273 56 aaKnown RBP12.33□□□□□ -0.43
RITA1-202ENST00000549621 OXTP01178 125 aa12.32□□□□□ -0.44
RITA1-202ENST00000549621 SPAG11AQ6PDA7 123 aa12.32□□□□□ -0.44
RITA1-202ENST00000549621 LINC00313P59037 77 aa12.32□□□□□ -0.44
RITA1-202ENST00000549621 C1orf64Q8NEQ6 169 aa12.3□□□□□ -0.44
RITA1-202ENST00000549621 FAM229AH3BQW9 127 aa12.28□□□□□ -0.44
RITA1-202ENST00000549621 SERP1Q9Y6X1 66 aa12.27□□□□□ -0.44
RITA1-202ENST00000549621 PKHD1L1Q86WI1 4243 aa12.26□□□□□ -0.45
RITA1-202ENST00000549621 KRTAP16-1A8MUX0 517 aa12.25□□□□□ -0.45
RITA1-202ENST00000549621 Q5VSD8 79 aa12.23□□□□□ -0.45
RITA1-202ENST00000549621 HSPG2P98160 4391 aa12.22□□□□□ -0.45
RITA1-202ENST00000549621 KRTAP13-3Q3SY46 172 aa12.21□□□□□ -0.45
RITA1-202ENST00000549621 Q8N9P0 234 aaPredicted RBP12.21□□□□□ -0.45
RITA1-202ENST00000549621 Q5W150 140 aa12.21□□□□□ -0.46
RITA1-202ENST00000549621 KRTAP17-1Q9BYP8 105 aa12.16□□□□□ -0.46
RITA1-202ENST00000549621 PRR4Q16378 134 aa12.14□□□□□ -0.47
RITA1-202ENST00000549621 CYP4F30PQ9H0H9 118 aa12.13□□□□□ -0.47
RITA1-202ENST00000549621 SPANXA2-OT1Q8N9U9 137 aa12.13□□□□□ -0.47
RITA1-202ENST00000549621 RYR1P21817 5038 aa12.11□□□□□ -0.47
RITA1-202ENST00000549621 PCOTHQ58A44 107 aa12.1□□□□□ -0.47
RITA1-202ENST00000549621 LOC101927531A0A1B0GV80 90 aa12.08□□□□□ -0.48
RITA1-202ENST00000549621 KRTAP10-8P60410 259 aa12.05□□□□□ -0.48
RITA1-202ENST00000549621 Q8N1X5 172 aa12.04□□□□□ -0.48
RITA1-202ENST00000549621 RETNLBQ9BQ08 111 aa12.04□□□□□ -0.48
RITA1-202ENST00000549621 IGLV7-46A0A075B6I9 117 aa12.02□□□□□ -0.49
RITA1-202ENST00000549621 FLG2Q5D862 2391 aaPredicted RBP12□□□□□ -0.49
RITA1-202ENST00000549621 SMIM26A0A096LP01 95 aa11.98□□□□□ -0.49
RITA1-202ENST00000549621 SVIPQ8NHG7 77 aa11.98□□□□□ -0.49
RITA1-202ENST00000549621 LRP1Q07954 4544 aaKnown RBP11.98□□□□□ -0.49
RITA1-202ENST00000549621 TNXBP22105 4242 aa11.97□□□□□ -0.49
RITA1-202ENST00000549621 KIAA1109Q2LD37 5005 aa11.96□□□□□ -0.49
RITA1-202ENST00000549621 C9orf92A6NGG3 77 aa11.95□□□□□ -0.5
RITA1-202ENST00000549621 IGKV2-30P06310 120 aa11.95□□□□□ -0.5
RITA1-202ENST00000549621 FP248Q71RG6 208 aaPredicted RBP11.95□□□□□ -0.5
RITA1-202ENST00000549621 EPPK1P58107 5090 aaKnown RBP11.91□□□□□ -0.5
RITA1-202ENST00000549621 C20orf166-AS1Q96NR2 134 aa11.88□□□□□ -0.51
RITA1-202ENST00000549621 FAT3Q8TDW7 4589 aa11.87□□□□□ -0.51
RITA1-202ENST00000549621 A8MUU9 505 aa11.87□□□□□ -0.51
RITA1-202ENST00000549621 MT1HL1P0DM35 61 aa11.84□□□□□ -0.51
RITA1-202ENST00000549621 HRES1P13985 223 aa11.84□□□□□ -0.51
RITA1-202ENST00000549621 IGKV2D-30A0A075B6S6 120 aa11.82□□□□□ -0.52
RITA1-202ENST00000549621 C4orf26Q17RF5 130 aa11.82□□□□□ -0.52
RITA1-202ENST00000549621 COA5Q86WW8 74 aa11.82□□□□□ -0.52
RITA1-202ENST00000549621 MPLKIPQ8TAP9 179 aa11.77□□□□□ -0.52
RITA1-202ENST00000549621 C7orf65Q6ZTY9 151 aa11.72□□□□□ -0.53
RITA1-202ENST00000549621 DMAC1Q96GE9 116 aa11.72□□□□□ -0.53
RITA1-202ENST00000549621 MYCBP2O75592 4640 aa11.71□□□□□ -0.54
RITA1-202ENST00000549621 Q75L30 129 aa11.7□□□□□ -0.54
RITA1-202ENST00000549621 KRTAP4-5Q9BYR2 181 aa11.69□□□□□ -0.54
RITA1-202ENST00000549621 DMBT1Q9UGM3 2413 aaPredicted RBP11.69□□□□□ -0.54
RITA1-202ENST00000549621 Q1T7F1 81 aa11.69□□□□□ -0.54
RITA1-202ENST00000549621 ACYP2P14621 99 aa11.65□□□□□ -0.54
RITA1-202ENST00000549621 XP32Q5T750 250 aa11.56□□□□□ -0.56
RITA1-202ENST00000549621 V9GYY9 64 aa11.55□□□□□ -0.56
RITA1-202ENST00000549621 RPL37P61927 97 aaKnown RBP11.54□□□□□ -0.56
RITA1-202ENST00000549621 SPINK7P58062 85 aa11.53□□□□□ -0.56
RITA1-202ENST00000549621 PSPHP1O15172 72 aa11.5□□□□□ -0.57
RITA1-202ENST00000549621 CHKB-CPT1BH3BT56 60 aa11.48□□□□□ -0.57
RITA1-202ENST00000549621 ATP11AUNQ6ZP68 121 aa11.48□□□□□ -0.57
RITA1-202ENST00000549621 A8MUN3 132 aa11.47□□□□□ -0.57
RITA1-202ENST00000549621 LINC01558Q9Y6Z2 57 aa11.43□□□□□ -0.58
RITA1-202ENST00000549621 PRR15LQ9BU68 103 aa11.42□□□□□ -0.58
RITA1-202ENST00000549621 Q5VV11 94 aa11.4□□□□□ -0.58
RITA1-202ENST00000549621 TPRXLQ17RH7 258 aa11.39□□□□□ -0.59
RITA1-202ENST00000549621 KRTAP3-1Q9BYR8 98 aa11.38□□□□□ -0.59
RITA1-202ENST00000549621 ABCA13Q86UQ4 5058 aa11.32□□□□□ -0.6
RITA1-202ENST00000549621 BIRC6Q9NR09 4857 aa11.32□□□□□ -0.6
RITA1-202ENST00000549621 COX6B2Q6YFQ2 88 aa11.29□□□□□ -0.6
RITA1-202ENST00000549621 HERC2O95714 4834 aa11.28□□□□□ -0.6
RITA1-202ENST00000549621 BRK1Q8WUW1 75 aa11.26□□□□□ -0.61
RITA1-202ENST00000549621 J3QL48 77 aa11.25□□□□□ -0.61
RITA1-202ENST00000549621 PRO0628Q9UI54 55 aa11.16□□□□□ -0.62
RITA1-202ENST00000549621 LPAP08519 4548 aa11.15□□□□□ -0.62
RITA1-202ENST00000549621 LRP2P98164 4655 aa11.14□□□□□ -0.63
RITA1-202ENST00000549621 A0A1B0GU69 56 aa11.13□□□□□ -0.63
RITA1-202ENST00000549621 SPTSSBQ8NFR3 76 aa11.12□□□□□ -0.63
RITA1-202ENST00000549621 A6NED7 52 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms