RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 H3BUA1 57 aa-0.5□□□□□ -2.49
SNRPF-202ENST00000549580 MXRA5Q9NR99 2828 aa-0.51□□□□□ -2.49
SNRPF-202ENST00000549580 BPTFQ12830 3046 aa-0.53□□□□□ -2.49
SNRPF-202ENST00000549580 HIVEP1P15822 2718 aa-0.53□□□□□ -2.49
SNRPF-202ENST00000549580 TEP1Q99973 2627 aaKnown RBP-0.53□□□□□ -2.49
SNRPF-202ENST00000549580 A0A087WWC5 75 aa-0.53□□□□□ -2.49
SNRPF-202ENST00000549580 DEFB110Q30KQ9 67 aa-0.53□□□□□ -2.49
SNRPF-202ENST00000549580 FASNP49327 2511 aaKnown RBP-0.53□□□□□ -2.49
SNRPF-202ENST00000549580 CUBNO60494 3623 aa-0.53□□□□□ -2.49
SNRPF-202ENST00000549580 ANKRD11Q6UB99 2663 aaPredicted RBP-0.54□□□□□ -2.5
SNRPF-202ENST00000549580 GCN1Q92616 2671 aaKnown RBP-0.54□□□□□ -2.5
SNRPF-202ENST00000549580 ZZEF1O43149 2961 aa-0.55□□□□□ -2.5
SNRPF-202ENST00000549580 CCDC180Q9P1Z9 1646 aa-0.55□□□□□ -2.5
SNRPF-202ENST00000549580 SFTA3P0C7M3 94 aa-0.55□□□□□ -2.5
SNRPF-202ENST00000549580 CLASP1Q7Z460 1538 aa-0.55□□□□□ -2.5
SNRPF-202ENST00000549580 DMXL1Q9Y485 3027 aa-0.55□□□□□ -2.5
SNRPF-202ENST00000549580 IGLV5-48A0A075B6I7 105 aa-0.56□□□□□ -2.5
SNRPF-202ENST00000549580 SERF2P84101 59 aa-0.56□□□□□ -2.5
SNRPF-202ENST00000549580 KMT2CQ8NEZ4 4911 aaKnown RBP-0.56□□□□□ -2.5
SNRPF-202ENST00000549580 M0R1W7 72 aa-0.57□□□□□ -2.5
SNRPF-202ENST00000549580 PCLOQ9Y6V0 5065 aa-0.57□□□□□ -2.5
SNRPF-202ENST00000549580 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.58□□□□□ -2.5
SNRPF-202ENST00000549580 NMES1Q9C002 83 aa-0.58□□□□□ -2.5
SNRPF-202ENST00000549580 NOP10Q9NPE3 64 aaKnown RBP-0.58□□□□□ -2.5
SNRPF-202ENST00000549580 ABCA6Q8N139 1617 aa-0.58□□□□□ -2.5
SNRPF-202ENST00000549580 DNAH9Q9NYC9 4486 aa-0.58□□□□□ -2.5
SNRPF-202ENST00000549580 LRRK2Q5S007 2527 aa-0.59□□□□□ -2.5
SNRPF-202ENST00000549580 LAMA5O15230 3695 aa-0.59□□□□□ -2.5
SNRPF-202ENST00000549580 CDC42BPAQ5VT25 1732 aa-0.6□□□□□ -2.51
SNRPF-202ENST00000549580 CROCC2H7BZ55 1655 aa-0.6□□□□□ -2.51
SNRPF-202ENST00000549580 VPS13BQ7Z7G8 4022 aa-0.6□□□□□ -2.51
SNRPF-202ENST00000549580 FAT3Q8TDW7 4589 aa-0.6□□□□□ -2.51
SNRPF-202ENST00000549580 TACC2O95359 2948 aa-0.61□□□□□ -2.51
SNRPF-202ENST00000549580 FAM186AA6NE01 2351 aa-0.61□□□□□ -2.51
SNRPF-202ENST00000549580 TIAM1Q13009 1591 aa-0.61□□□□□ -2.51
SNRPF-202ENST00000549580 MMP24-AS1A0A0U1RRL7 71 aa-0.61□□□□□ -2.51
SNRPF-202ENST00000549580 ACACAQ13085 2346 aa-0.61□□□□□ -2.51
SNRPF-202ENST00000549580 LY75O60449 1722 aa-0.62□□□□□ -2.51
SNRPF-202ENST00000549580 PKHD1L1Q86WI1 4243 aa-0.62□□□□□ -2.51
SNRPF-202ENST00000549580 ANK3Q12955 4377 aaKnown RBP-0.62□□□□□ -2.51
SNRPF-202ENST00000549580 S100ZQ8WXG8 99 aa-0.64□□□□□ -2.51
SNRPF-202ENST00000549580 TMEM167BQ9NRX6 74 aa-0.65□□□□□ -2.51
SNRPF-202ENST00000549580 HTTP42858 3142 aa-0.65□□□□□ -2.51
SNRPF-202ENST00000549580 MYO18BQ8IUG5 2567 aa-0.65□□□□□ -2.51
SNRPF-202ENST00000549580 GLI2P10070 1586 aa-0.66□□□□□ -2.51
SNRPF-202ENST00000549580 ACACBO00763 2458 aa-0.66□□□□□ -2.51
SNRPF-202ENST00000549580 SMIM31A0A1B0GVY4 71 aa-0.66□□□□□ -2.52
SNRPF-202ENST00000549580 TNP1P09430 55 aa-0.66□□□□□ -2.52
SNRPF-202ENST00000549580 UTP20O75691 2785 aaKnown RBP-0.66□□□□□ -2.52
SNRPF-202ENST00000549580 EEA1Q15075 1411 aa-0.66□□□□□ -2.52
SNRPF-202ENST00000549580 DNAH6Q9C0G6 4158 aa-0.66□□□□□ -2.52
SNRPF-202ENST00000549580 SMIM5Q71RC9 77 aa-0.67□□□□□ -2.52
SNRPF-202ENST00000549580 MGAM2Q2M2H8 2515 aa-0.68□□□□□ -2.52
SNRPF-202ENST00000549580 ABCA10Q8WWZ4 1543 aa-0.68□□□□□ -2.52
SNRPF-202ENST00000549580 NBPF19A0A087WUL8 3843 aa-0.68□□□□□ -2.52
SNRPF-202ENST00000549580 IGIPA6NJ69 53 aa-0.68□□□□□ -2.52
SNRPF-202ENST00000549580 ABRACLQ9P1F3 81 aa-0.68□□□□□ -2.52
SNRPF-202ENST00000549580 AKAP9Q99996 3911 aa-0.69□□□□□ -2.52
SNRPF-202ENST00000549580 NBEAL2Q6ZNJ1 2754 aa-0.69□□□□□ -2.52
SNRPF-202ENST00000549580 KRTAP20-2Q3LI61 65 aa-0.69□□□□□ -2.52
SNRPF-202ENST00000549580 LINC00308Q8TCZ7 52 aa-0.69□□□□□ -2.52
SNRPF-202ENST00000549580 CCDC168Q8NDH2 2452 aa-0.69□□□□□ -2.52
SNRPF-202ENST00000549580 ALS2Q96Q42 1657 aa-0.69□□□□□ -2.52
SNRPF-202ENST00000549580 NBEAQ8NFP9 2946 aa-0.7□□□□□ -2.52
SNRPF-202ENST00000549580 RYR3Q15413 4870 aa-0.71□□□□□ -2.52
SNRPF-202ENST00000549580 DNAH3Q8TD57 4116 aa-0.72□□□□□ -2.52
SNRPF-202ENST00000549580 CPS1P31327 1500 aa-0.72□□□□□ -2.52
SNRPF-202ENST00000549580 UGGT1Q9NYU2 1555 aa-0.72□□□□□ -2.52
SNRPF-202ENST00000549580 DOPEY1Q5JWR5 2465 aa-0.72□□□□□ -2.52
SNRPF-202ENST00000549580 LAMA1P25391 3075 aa-0.72□□□□□ -2.52
SNRPF-202ENST00000549580 HERC1Q15751 4861 aa-0.72□□□□□ -2.53
SNRPF-202ENST00000549580 A0A1B0GUL6 1792 aa-0.73□□□□□ -2.53
SNRPF-202ENST00000549580 MT4P47944 62 aa-0.73□□□□□ -2.53
SNRPF-202ENST00000549580 APOBP04114 4563 aaKnown RBP-0.74□□□□□ -2.53
SNRPF-202ENST00000549580 CLPSL2Q6UWE3 100 aa-0.74□□□□□ -2.53
SNRPF-202ENST00000549580 KALRNO60229 2985 aa-0.74□□□□□ -2.53
SNRPF-202ENST00000549580 SACSQ9NZJ4 4579 aa-0.75□□□□□ -2.53
SNRPF-202ENST00000549580 STARD9Q9P2P6 4700 aa-0.75□□□□□ -2.53
SNRPF-202ENST00000549580 H0YGX0 51 aa-0.75□□□□□ -2.53
SNRPF-202ENST00000549580 M0QY20 66 aa-0.75□□□□□ -2.53
SNRPF-202ENST00000549580 KAAG1Q9UBP8 84 aa-0.75□□□□□ -2.53
SNRPF-202ENST00000549580 USH2AO75445 5202 aa-0.75□□□□□ -2.53
SNRPF-202ENST00000549580 SMIM27A0A1W2PRY6 76 aa-0.76□□□□□ -2.53
SNRPF-202ENST00000549580 KRTAP19-5Q3LI72 72 aa-0.76□□□□□ -2.53
SNRPF-202ENST00000549580 VPS13DQ5THJ4 4388 aa-0.77□□□□□ -2.53
SNRPF-202ENST00000549580 MAST1Q9Y2H9 1570 aa-0.77□□□□□ -2.53
SNRPF-202ENST00000549580 DEFB1P60022 68 aa-0.77□□□□□ -2.53
SNRPF-202ENST00000549580 RIF1Q5UIP0 2472 aaKnown RBP-0.77□□□□□ -2.53
SNRPF-202ENST00000549580 DNAH11Q96DT5 4516 aa-0.78□□□□□ -2.53
SNRPF-202ENST00000549580 HERC2O95714 4834 aa-0.78□□□□□ -2.53
SNRPF-202ENST00000549580 ITPR3Q14573 2671 aa-0.78□□□□□ -2.53
SNRPF-202ENST00000549580 PRXQ9BXM0 1461 aa-0.79□□□□□ -2.54
SNRPF-202ENST00000549580 M0QZ58 72 aa-0.79□□□□□ -2.54
SNRPF-202ENST00000549580 MT1HP80294 61 aa-0.79□□□□□ -2.54
SNRPF-202ENST00000549580 MUC17Q685J3 4493 aa-0.79□□□□□ -2.54
SNRPF-202ENST00000549580 KIAA1109Q2LD37 5005 aa-0.79□□□□□ -2.54
SNRPF-202ENST00000549580 EFCAB6Q5THR3 1501 aa-0.79□□□□□ -2.54
SNRPF-202ENST00000549580 A8MTW9 85 aa-0.8□□□□□ -2.54
SNRPF-202ENST00000549580 FAT1Q14517 4588 aa-0.8□□□□□ -2.54
SNRPF-202ENST00000549580 FAM208AQ9UK61 1670 aaKnown RBP-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms