RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 CSMD3Q7Z407 3707 aa0.89□□□□□ -2.27
USP15-213ENST00000549268 TRRAPQ9Y4A5 3859 aa0.89□□□□□ -2.27
USP15-213ENST00000549268 PKDREJQ9NTG1 2253 aa0.89□□□□□ -2.27
USP15-213ENST00000549268 KANTRA0A1W2PQU2 76 aa0.89□□□□□ -2.27
USP15-213ENST00000549268 ACYP1P07311 99 aa0.89□□□□□ -2.27
USP15-213ENST00000549268 PLGLAQ15195 96 aa0.89□□□□□ -2.27
USP15-213ENST00000549268 FXYD6-FXYD2A0A087WZ82 144 aa0.88□□□□□ -2.27
USP15-213ENST00000549268 KRTAP2-3P0C7H8 128 aa0.88□□□□□ -2.27
USP15-213ENST00000549268 KRTAP2-4Q9BYR9 128 aa0.88□□□□□ -2.27
USP15-213ENST00000549268 KRTAP2-1Q9BYU5 128 aa0.88□□□□□ -2.27
USP15-213ENST00000549268 ANKARQ7Z5J8 1434 aa0.88□□□□□ -2.27
USP15-213ENST00000549268 ANKRD36A6QL64 1941 aa0.87□□□□□ -2.27
USP15-213ENST00000549268 LOC730098B7Z3J9 87 aa0.87□□□□□ -2.27
USP15-213ENST00000549268 A0A1B0GUL6 1792 aa0.87□□□□□ -2.27
USP15-213ENST00000549268 KNL1Q8NG31 2342 aa0.87□□□□□ -2.27
USP15-213ENST00000549268 HECTD4Q9Y4D8 3996 aa0.87□□□□□ -2.27
USP15-213ENST00000549268 NFAT5O94916 1531 aa0.86□□□□□ -2.27
USP15-213ENST00000549268 PRH1P02810 166 aa0.86□□□□□ -2.27
USP15-213ENST00000549268 LYSTQ99698 3801 aa0.86□□□□□ -2.27
USP15-213ENST00000549268 MACF1Q9UPN3 7388 aaKnown RBP0.85□□□□□ -2.27
USP15-213ENST00000549268 FRAS1Q86XX4 4008 aa0.85□□□□□ -2.27
USP15-213ENST00000549268 CEBPZOSA8MTT3 80 aa0.85□□□□□ -2.27
USP15-213ENST00000549268 CMYA5Q8N3K9 4069 aa0.84□□□□□ -2.27
USP15-213ENST00000549268 A0A1B0GUT8 65 aa0.84□□□□□ -2.27
USP15-213ENST00000549268 H3BUT2 72 aa0.84□□□□□ -2.27
USP15-213ENST00000549268 DEFB112Q30KQ8 113 aa0.84□□□□□ -2.27
USP15-213ENST00000549268 BVES-AS1Q5T3Y7 98 aa0.84□□□□□ -2.27
USP15-213ENST00000549268 SPINK6Q6UWN8 80 aa0.84□□□□□ -2.27
USP15-213ENST00000549268 AKAP6Q13023 2319 aa0.84□□□□□ -2.28
USP15-213ENST00000549268 SSPOA2VEC9 5147 aa0.83□□□□□ -2.28
USP15-213ENST00000549268 USF3Q68DE3 2245 aa0.83□□□□□ -2.28
USP15-213ENST00000549268 K7EQZ3 153 aa0.83□□□□□ -2.28
USP15-213ENST00000549268 KMT2AQ03164 3969 aa0.81□□□□□ -2.28
USP15-213ENST00000549268 HMCN2Q8NDA2 5059 aa0.81□□□□□ -2.28
USP15-213ENST00000549268 DEFB124Q8NES8 71 aa0.81□□□□□ -2.28
USP15-213ENST00000549268 SMR3AQ99954 134 aa0.81□□□□□ -2.28
USP15-213ENST00000549268 NEBP20929 6669 aa0.81□□□□□ -2.28
USP15-213ENST00000549268 CD163L1Q9NR16 1453 aa0.8□□□□□ -2.28
USP15-213ENST00000549268 DYNC2H1Q8NCM8 4307 aaKnown RBP0.8□□□□□ -2.28
USP15-213ENST00000549268 DNAH1Q9P2D7 4330 aa0.8□□□□□ -2.28
USP15-213ENST00000549268 CRIPTQ9P021 101 aa0.8□□□□□ -2.28
USP15-213ENST00000549268 RGPD2P0DJD1 1756 aa0.79□□□□□ -2.28
USP15-213ENST00000549268 COX6B1P14854 86 aa0.79□□□□□ -2.28
USP15-213ENST00000549268 USMG5Q96IX5 58 aa0.79□□□□□ -2.28
USP15-213ENST00000549268 KIF20BQ96Q89 1820 aa0.79□□□□□ -2.28
USP15-213ENST00000549268 HRNRQ86YZ3 2850 aaPredicted RBP0.79□□□□□ -2.28
USP15-213ENST00000549268 SACSQ9NZJ4 4579 aa0.79□□□□□ -2.28
USP15-213ENST00000549268 ANKRD50Q9ULJ7 1429 aa0.79□□□□□ -2.28
USP15-213ENST00000549268 HSPG2P98160 4391 aa0.79□□□□□ -2.28
USP15-213ENST00000549268 PKHD1P08F94 4074 aa0.78□□□□□ -2.28
USP15-213ENST00000549268 Q5VSD8 79 aa0.78□□□□□ -2.28
USP15-213ENST00000549268 TNCP24821 2201 aa0.78□□□□□ -2.28
USP15-213ENST00000549268 MYCBP2O75592 4640 aa0.77□□□□□ -2.29
USP15-213ENST00000549268 TRAV21A0A0B4J279 112 aa0.77□□□□□ -2.29
USP15-213ENST00000549268 SYNE2Q8WXH0 6885 aaKnown RBP0.77□□□□□ -2.29
USP15-213ENST00000549268 DNAH7Q8WXX0 4024 aa0.76□□□□□ -2.29
USP15-213ENST00000549268 Q5BKY6 102 aa0.76□□□□□ -2.29
USP15-213ENST00000549268 DEFB121Q5J5C9 76 aa0.76□□□□□ -2.29
USP15-213ENST00000549268 GAFA1Q96PS6 74 aa0.76□□□□□ -2.29
USP15-213ENST00000549268 WNK2Q9Y3S1 2297 aa0.76□□□□□ -2.29
USP15-213ENST00000549268 HUWE1Q7Z6Z7 4374 aaKnown RBP0.75□□□□□ -2.29
USP15-213ENST00000549268 SPTY2D1-AS1A0A0U1RR47 76 aa0.75□□□□□ -2.29
USP15-213ENST00000549268 LCE6AA0A183 80 aa0.75□□□□□ -2.29
USP15-213ENST00000549268 SPRR1BP22528 89 aa0.75□□□□□ -2.29
USP15-213ENST00000549268 COX7BP24311 80 aa0.75□□□□□ -2.29
USP15-213ENST00000549268 SPRR1AP35321 89 aa0.75□□□□□ -2.29
USP15-213ENST00000549268 DYNC1H1Q14204 4646 aaKnown RBP0.74□□□□□ -2.29
USP15-213ENST00000549268 CFDP00746 253 aaPredicted RBP0.74□□□□□ -2.29
USP15-213ENST00000549268 COX8AP10176 69 aa0.74□□□□□ -2.29
USP15-213ENST00000549268 C18orf32Q8TCD1 76 aa0.74□□□□□ -2.29
USP15-213ENST00000549268 ANKRD36CQ5JPF3 1778 aa0.74□□□□□ -2.29
USP15-213ENST00000549268 DNAH9Q9NYC9 4486 aa0.74□□□□□ -2.29
USP15-213ENST00000549268 LRP2P98164 4655 aa0.73□□□□□ -2.29
USP15-213ENST00000549268 I3L3M4 83 aa0.73□□□□□ -2.29
USP15-213ENST00000549268 KRTAP20-1Q3LI63 56 aa0.73□□□□□ -2.29
USP15-213ENST00000549268 WFDC9Q8NEX5 89 aa0.73□□□□□ -2.29
USP15-213ENST00000549268 FAT2Q9NYQ8 4349 aa0.73□□□□□ -2.29
USP15-213ENST00000549268 CPSF4LA6NMK7 179 aaKnown RBP0.72□□□□□ -2.29
USP15-213ENST00000549268 USH2AO75445 5202 aa0.72□□□□□ -2.29
USP15-213ENST00000549268 DSTQ03001 7570 aaKnown RBP0.72□□□□□ -2.29
USP15-213ENST00000549268 KMT2DO14686 5537 aa0.71□□□□□ -2.3
USP15-213ENST00000549268 ALMS1Q8TCU4 4167 aa0.71□□□□□ -2.3
USP15-213ENST00000549268 ATP5EP2Q5VTU8 51 aa0.71□□□□□ -2.3
USP15-213ENST00000549268 STARD9Q9P2P6 4700 aa0.7□□□□□ -2.3
USP15-213ENST00000549268 NDUFB1O75438 58 aa0.7□□□□□ -2.3
USP15-213ENST00000549268 DEFB109BQ30KR1 87 aa0.7□□□□□ -2.3
USP15-213ENST00000549268 MUC12Q9UKN1 5478 aa0.7□□□□□ -2.3
USP15-213ENST00000549268 ANK3Q12955 4377 aaKnown RBP0.69□□□□□ -2.3
USP15-213ENST00000549268 SPINK1P00995 79 aa0.69□□□□□ -2.3
USP15-213ENST00000549268 IFI6P09912 130 aa0.69□□□□□ -2.3
USP15-213ENST00000549268 SMIM13P0DJ93 91 aa0.69□□□□□ -2.3
USP15-213ENST00000549268 MRPL34Q9BQ48 92 aaKnown RBP0.69□□□□□ -2.3
USP15-213ENST00000549268 MDN1Q9NU22 5596 aa0.69□□□□□ -2.3
USP15-213ENST00000549268 PLECQ15149 4684 aaKnown RBP0.69□□□□□ -2.3
USP15-213ENST00000549268 APOBP04114 4563 aaKnown RBP0.69□□□□□ -2.3
USP15-213ENST00000549268 MUC5ACP98088 5654 aa0.69□□□□□ -2.3
USP15-213ENST00000549268 DNAH6Q9C0G6 4158 aa0.68□□□□□ -2.3
USP15-213ENST00000549268 A0A087WXM4 84 aa0.68□□□□□ -2.3
USP15-213ENST00000549268 DNAH10Q8IVF4 4471 aa0.68□□□□□ -2.3
USP15-213ENST00000549268 LELP1Q5T871 98 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms