RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 A0A1B0GW54 56 aa8.36□□□□□ -1.07
CHMP1A-206ENST00000549139 H3BT86 120 aa8.36□□□□□ -1.07
CHMP1A-206ENST00000549139 COL5A1-AS1Q5SY13 56 aa8.36□□□□□ -1.07
CHMP1A-206ENST00000549139 Q75L30 129 aa8.36□□□□□ -1.07
CHMP1A-206ENST00000549139 SIGMAR1Q99720 223 aa8.35□□□□□ -1.07
CHMP1A-206ENST00000549139 DEFB116Q30KQ4 102 aa8.33□□□□□ -1.08
CHMP1A-206ENST00000549139 C14orf132Q9NPU4 83 aa8.33□□□□□ -1.08
CHMP1A-206ENST00000549139 SPCS1Q9Y6A9 102 aa8.32□□□□□ -1.08
CHMP1A-206ENST00000549139 LINC00313P59037 77 aa8.31□□□□□ -1.08
CHMP1A-206ENST00000549139 C20orf166-AS1Q96NR2 134 aa8.31□□□□□ -1.08
CHMP1A-206ENST00000549139 SSPOA2VEC9 5147 aa8.3□□□□□ -1.08
CHMP1A-206ENST00000549139 DSCR10P59022 87 aa8.3□□□□□ -1.08
CHMP1A-206ENST00000549139 ATP11AUNQ6ZP68 121 aa8.3□□□□□ -1.08
CHMP1A-206ENST00000549139 A8MUU9 505 aa8.29□□□□□ -1.08
CHMP1A-206ENST00000549139 J3KT08 172 aa8.29□□□□□ -1.08
CHMP1A-206ENST00000549139 MTURNQ8N3F0 131 aa8.29□□□□□ -1.08
CHMP1A-206ENST00000549139 PCP4L1A6NKN8 68 aa8.27□□□□□ -1.09
CHMP1A-206ENST00000549139 M0R2T5 61 aa8.26□□□□□ -1.09
CHMP1A-206ENST00000549139 IGHV6-1A0A0B4J1U7 121 aa8.25□□□□□ -1.09
CHMP1A-206ENST00000549139 KRTAP16-1A8MUX0 517 aa8.25□□□□□ -1.09
CHMP1A-206ENST00000549139 NOTCH2NLQ7Z3S9 236 aa8.25□□□□□ -1.09
CHMP1A-206ENST00000549139 A0A1B0GVX0 72 aa8.24□□□□□ -1.09
CHMP1A-206ENST00000549139 C8orf87E5RJ46 101 aa8.24□□□□□ -1.09
CHMP1A-206ENST00000549139 USH2AO75445 5202 aa8.23□□□□□ -1.09
CHMP1A-206ENST00000549139 SMCPP49901 116 aaPredicted RBP8.23□□□□□ -1.09
CHMP1A-206ENST00000549139 K7EP34 96 aa8.22□□□□□ -1.09
CHMP1A-206ENST00000549139 NDUFB1O75438 58 aa8.21□□□□□ -1.1
CHMP1A-206ENST00000549139 NREPQ16612 68 aa8.21□□□□□ -1.1
CHMP1A-206ENST00000549139 PRO0461Q9UI25 63 aa8.2□□□□□ -1.1
CHMP1A-206ENST00000549139 A8MWP4 228 aa8.18□□□□□ -1.1
CHMP1A-206ENST00000549139 GTF2H5Q6ZYL4 71 aa8.17□□□□□ -1.1
CHMP1A-206ENST00000549139 IGKV3D-7A0A0C4DH55 119 aa8.14□□□□□ -1.11
CHMP1A-206ENST00000549139 COX6B2Q6YFQ2 88 aa8.14□□□□□ -1.11
CHMP1A-206ENST00000549139 FCGBPQ9Y6R7 5405 aaPredicted RBP8.12□□□□□ -1.11
CHMP1A-206ENST00000549139 PRR15Q8IV56 129 aa8.12□□□□□ -1.11
CHMP1A-206ENST00000549139 C8orf17Q9NRJ1 99 aa8.12□□□□□ -1.11
CHMP1A-206ENST00000549139 F8W1H4 67 aa8.11□□□□□ -1.11
CHMP1A-206ENST00000549139 Q8N9P0 234 aaPredicted RBP8.09□□□□□ -1.11
CHMP1A-206ENST00000549139 Q6ZVQ6 151 aa8.08□□□□□ -1.12
CHMP1A-206ENST00000549139 BPY2O14599 106 aa8.07□□□□□ -1.12
CHMP1A-206ENST00000549139 K7EQZ3 153 aa8.04□□□□□ -1.12
CHMP1A-206ENST00000549139 ZCCHC13Q8WW36 166 aaKnown RBP8.04□□□□□ -1.12
CHMP1A-206ENST00000549139 MMP24-AS1A0A0U1RRL7 71 aa8.03□□□□□ -1.12
CHMP1A-206ENST00000549139 KRTAP9-8Q9BYQ0 159 aa8.03□□□□□ -1.12
CHMP1A-206ENST00000549139 ETDBQ3ZM63 59 aa8.02□□□□□ -1.13
CHMP1A-206ENST00000549139 TMEM254Q8TBM7 123 aa8.02□□□□□ -1.13
CHMP1A-206ENST00000549139 LINC00846Q9NV44 126 aa8.02□□□□□ -1.13
CHMP1A-206ENST00000549139 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
CHMP1A-206ENST00000549139 UBL5Q9BZL1 73 aa8.01□□□□□ -1.13
CHMP1A-206ENST00000549139 hDV103S1A0JD37 113 aa7.99□□□□□ -1.13
CHMP1A-206ENST00000549139 SYNE2Q8WXH0 6885 aaKnown RBP7.99□□□□□ -1.13
CHMP1A-206ENST00000549139 HRES1P13985 223 aa7.95□□□□□ -1.14
CHMP1A-206ENST00000549139 MACF1Q9UPN3 7388 aaKnown RBP7.95□□□□□ -1.14
CHMP1A-206ENST00000549139 KRTAP19-1Q8IUB9 90 aa7.94□□□□□ -1.14
CHMP1A-206ENST00000549139 Q8N9L7 120 aa7.94□□□□□ -1.14
CHMP1A-206ENST00000549139 MPLKIPQ8TAP9 179 aa7.94□□□□□ -1.14
CHMP1A-206ENST00000549139 SPINK7P58062 85 aa7.93□□□□□ -1.14
CHMP1A-206ENST00000549139 RBM12B-AS1Q9P1G2 102 aa7.92□□□□□ -1.14
CHMP1A-206ENST00000549139 NDUFS5O43920 106 aa7.91□□□□□ -1.14
CHMP1A-206ENST00000549139 CASC2Q6XLA1 102 aa7.91□□□□□ -1.14
CHMP1A-206ENST00000549139 WFDC13Q8IUB5 93 aa7.9□□□□□ -1.14
CHMP1A-206ENST00000549139 FAM236DA0A1B0GTK5 79 aa7.88□□□□□ -1.15
CHMP1A-206ENST00000549139 LCE2BO14633 110 aa7.88□□□□□ -1.15
CHMP1A-206ENST00000549139 FAM236CP0DP71 79 aa7.88□□□□□ -1.15
CHMP1A-206ENST00000549139 CXCL6P80162 114 aa7.87□□□□□ -1.15
CHMP1A-206ENST00000549139 ACYP1P07311 99 aa7.86□□□□□ -1.15
CHMP1A-206ENST00000549139 HCG22E2RYF7 251 aa7.85□□□□□ -1.15
CHMP1A-206ENST00000549139 MT2AP02795 61 aa7.85□□□□□ -1.15
CHMP1A-206ENST00000549139 A0A1B0GV90 55 aa7.84□□□□□ -1.15
CHMP1A-206ENST00000549139 FAM240AA0A1B0GVK7 77 aa7.82□□□□□ -1.16
CHMP1A-206ENST00000549139 Q5W150 140 aa7.82□□□□□ -1.16
CHMP1A-206ENST00000549139 KRTAP9-3Q9BYQ3 159 aa7.8□□□□□ -1.16
CHMP1A-206ENST00000549139 MT1FP04733 61 aa7.79□□□□□ -1.16
CHMP1A-206ENST00000549139 C7orf65Q6ZTY9 151 aa7.74□□□□□ -1.17
CHMP1A-206ENST00000549139 IGKV2D-30A0A075B6S6 120 aa7.73□□□□□ -1.17
CHMP1A-206ENST00000549139 IGKV2-30P06310 120 aa7.73□□□□□ -1.17
CHMP1A-206ENST00000549139 ATP5EP2Q5VTU8 51 aa7.73□□□□□ -1.17
CHMP1A-206ENST00000549139 TP53AIP1Q9HCN2 124 aa7.72□□□□□ -1.17
CHMP1A-206ENST00000549139 KRTAP19-6Q3LI70 58 aa7.68□□□□□ -1.18
CHMP1A-206ENST00000549139 KRTAP10-10P60014 251 aa7.67□□□□□ -1.18
CHMP1A-206ENST00000549139 LINC00643Q86TS7 51 aa7.67□□□□□ -1.18
CHMP1A-206ENST00000549139 HIST1H4AP62805 103 aaKnown RBP7.64□□□□□ -1.19
CHMP1A-206ENST00000549139 KRTAP6-3Q3LI67 103 aa7.64□□□□□ -1.19
CHMP1A-206ENST00000549139 H1FX-AS1Q4G0G2 97 aa7.63□□□□□ -1.19
CHMP1A-206ENST00000549139 J3QR89 54 aa7.61□□□□□ -1.19
CHMP1A-206ENST00000549139 C4orf26Q17RF5 130 aa7.59□□□□□ -1.19
CHMP1A-206ENST00000549139 A0A087WVE0 104 aa7.55□□□□□ -1.2
CHMP1A-206ENST00000549139 TRAV22A0A0B4J277 110 aa7.55□□□□□ -1.2
CHMP1A-206ENST00000549139 NEBP20929 6669 aa7.54□□□□□ -1.2
CHMP1A-206ENST00000549139 UQCRQO14949 82 aa7.53□□□□□ -1.2
CHMP1A-206ENST00000549139 CYP4F30PQ9H0H9 118 aa7.52□□□□□ -1.21
CHMP1A-206ENST00000549139 LOC101927531A0A1B0GV80 90 aa7.5□□□□□ -1.21
CHMP1A-206ENST00000549139 KRTAP3-1Q9BYR8 98 aa7.5□□□□□ -1.21
CHMP1A-206ENST00000549139 C1orf64Q8NEQ6 169 aa7.49□□□□□ -1.21
CHMP1A-206ENST00000549139 ATOX1O00244 68 aa7.47□□□□□ -1.21
CHMP1A-206ENST00000549139 H0Y9P7 68 aa7.45□□□□□ -1.22
CHMP1A-206ENST00000549139 OCR1Q9BZK8 76 aa7.42□□□□□ -1.22
CHMP1A-206ENST00000549139 MUC12Q9UKN1 5478 aa7.42□□□□□ -1.22
CHMP1A-206ENST00000549139 K7ERU9 68 aa7.4□□□□□ -1.22
CHMP1A-206ENST00000549139 S4R3F8 94 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms