RNA–Protein interactions for RNA: ENST00000549040.5

RFX4-208, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-208ENST00000549040 LOC110117498A0A087WWA1 95 aa4.61□□□□□ -1.67
RFX4-208ENST00000549040 SPINK1P00995 79 aa4.61□□□□□ -1.67
RFX4-208ENST00000549040 Q6ZQT0 140 aa4.61□□□□□ -1.67
RFX4-208ENST00000549040 C14orf132Q9NPU4 83 aa4.61□□□□□ -1.67
RFX4-208ENST00000549040 TRBV7-7A0A0K0K1E9 115 aa4.6□□□□□ -1.67
RFX4-208ENST00000549040 ETDBQ3ZM63 59 aa4.6□□□□□ -1.67
RFX4-208ENST00000549040 TEN1Q86WV5 123 aa4.6□□□□□ -1.67
RFX4-208ENST00000549040 RPS29P62273 56 aaKnown RBP4.59□□□□□ -1.67
RFX4-208ENST00000549040 Q5XG85 94 aa4.59□□□□□ -1.67
RFX4-208ENST00000549040 DSCR8Q96T75 97 aa4.59□□□□□ -1.67
RFX4-208ENST00000549040 CCKP06307 115 aa4.58□□□□□ -1.68
RFX4-208ENST00000549040 PDE6GP18545 87 aa4.57□□□□□ -1.68
RFX4-208ENST00000549040 A0A087WSZ3 146 aa4.56□□□□□ -1.68
RFX4-208ENST00000549040 ASB16-AS1Q495Z4 193 aa4.56□□□□□ -1.68
RFX4-208ENST00000549040 C1orf195Q5TG92 126 aa4.55□□□□□ -1.68
RFX4-208ENST00000549040 Q96NJ1 140 aa4.55□□□□□ -1.68
RFX4-208ENST00000549040 RETNLBQ9BQ08 111 aa4.55□□□□□ -1.68
RFX4-208ENST00000549040 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
RFX4-208ENST00000549040 VPS25Q9BRG1 176 aa4.54□□□□□ -1.68
RFX4-208ENST00000549040 A0A1B0GW54 56 aa4.53□□□□□ -1.68
RFX4-208ENST00000549040 LIMD2Q9BT23 127 aa4.53□□□□□ -1.68
RFX4-208ENST00000549040 LINC00472Q9H8W2 130 aa4.53□□□□□ -1.68
RFX4-208ENST00000549040 RNF213Q63HN8 5207 aa4.53□□□□□ -1.68
RFX4-208ENST00000549040 LRP2P98164 4655 aa4.52□□□□□ -1.69
RFX4-208ENST00000549040 DEFB116Q30KQ4 102 aa4.5□□□□□ -1.69
RFX4-208ENST00000549040 LINC00846Q9NV44 126 aa4.5□□□□□ -1.69
RFX4-208ENST00000549040 SS18L2Q9UHA2 77 aa4.49□□□□□ -1.69
RFX4-208ENST00000549040 IGLV7-46A0A075B6I9 117 aa4.48□□□□□ -1.69
RFX4-208ENST00000549040 PRR4Q16378 134 aa4.48□□□□□ -1.69
RFX4-208ENST00000549040 FP248Q71RG6 208 aaPredicted RBP4.48□□□□□ -1.69
RFX4-208ENST00000549040 PCP4P48539 62 aa4.47□□□□□ -1.69
RFX4-208ENST00000549040 NREPQ16612 68 aa4.47□□□□□ -1.69
RFX4-208ENST00000549040 Q6ZVQ6 151 aa4.47□□□□□ -1.69
RFX4-208ENST00000549040 KRTAP13-3Q3SY46 172 aa4.46□□□□□ -1.7
RFX4-208ENST00000549040 FAM240AA0A1B0GVK7 77 aa4.45□□□□□ -1.7
RFX4-208ENST00000549040 IGKV4-1P06312 121 aa4.45□□□□□ -1.7
RFX4-208ENST00000549040 DSCR10P59022 87 aa4.45□□□□□ -1.7
RFX4-208ENST00000549040 SVIPQ8NHG7 77 aa4.45□□□□□ -1.7
RFX4-208ENST00000549040 LPAP08519 4548 aa4.44□□□□□ -1.7
RFX4-208ENST00000549040 NOTCH2NLQ7Z3S9 236 aa4.44□□□□□ -1.7
RFX4-208ENST00000549040 ACYP1P07311 99 aa4.43□□□□□ -1.7
RFX4-208ENST00000549040 TPRXLQ17RH7 258 aa4.43□□□□□ -1.7
RFX4-208ENST00000549040 IGKV3D-7A0A0C4DH55 119 aa4.42□□□□□ -1.7
RFX4-208ENST00000549040 J3KT08 172 aa4.42□□□□□ -1.7
RFX4-208ENST00000549040 C9orf92A6NGG3 77 aa4.41□□□□□ -1.7
RFX4-208ENST00000549040 SIGMAR1Q99720 223 aa4.41□□□□□ -1.7
RFX4-208ENST00000549040 UBL5Q9BZL1 73 aa4.41□□□□□ -1.7
RFX4-208ENST00000549040 A0A1B0GVX0 72 aa4.4□□□□□ -1.71
RFX4-208ENST00000549040 A8MWP4 228 aa4.4□□□□□ -1.71
RFX4-208ENST00000549040 BPY2O14599 106 aa4.4□□□□□ -1.71
RFX4-208ENST00000549040 KRTAP10-6P60371 365 aaPredicted RBP4.4□□□□□ -1.71
RFX4-208ENST00000549040 PRR15Q8IV56 129 aa4.4□□□□□ -1.71
RFX4-208ENST00000549040 KRTAP16-1A8MUX0 517 aa4.39□□□□□ -1.71
RFX4-208ENST00000549040 Q8N9L7 120 aa4.39□□□□□ -1.71
RFX4-208ENST00000549040 IGHV6-1A0A0B4J1U7 121 aa4.38□□□□□ -1.71
RFX4-208ENST00000549040 K7EQZ3 153 aa4.38□□□□□ -1.71
RFX4-208ENST00000549040 J3QR89 54 aa4.37□□□□□ -1.71
RFX4-208ENST00000549040 MT3P25713 68 aa4.37□□□□□ -1.71
RFX4-208ENST00000549040 LINC00313P59037 77 aa4.37□□□□□ -1.71
RFX4-208ENST00000549040 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
RFX4-208ENST00000549040 LINC00643Q86TS7 51 aa4.37□□□□□ -1.71
RFX4-208ENST00000549040 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
RFX4-208ENST00000549040 K7ERU9 68 aa4.36□□□□□ -1.71
RFX4-208ENST00000549040 NDUFB1O75438 58 aa4.36□□□□□ -1.71
RFX4-208ENST00000549040 CXCL6P80162 114 aa4.36□□□□□ -1.71
RFX4-208ENST00000549040 C8orf17Q9NRJ1 99 aa4.36□□□□□ -1.71
RFX4-208ENST00000549040 MMP24-AS1A0A0U1RRL7 71 aa4.35□□□□□ -1.71
RFX4-208ENST00000549040 A8MUU9 505 aa4.34□□□□□ -1.71
RFX4-208ENST00000549040 C8orf87E5RJ46 101 aa4.34□□□□□ -1.71
RFX4-208ENST00000549040 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
RFX4-208ENST00000549040 RPL37P61927 97 aaKnown RBP4.32□□□□□ -1.72
RFX4-208ENST00000549040 ATP5EP2Q5VTU8 51 aa4.32□□□□□ -1.72
RFX4-208ENST00000549040 Q75L30 129 aa4.32□□□□□ -1.72
RFX4-208ENST00000549040 MUC17Q685J3 4493 aa4.31□□□□□ -1.72
RFX4-208ENST00000549040 hDV103S1A0JD37 113 aa4.3□□□□□ -1.72
RFX4-208ENST00000549040 MT-ATP8P03928 68 aa4.3□□□□□ -1.72
RFX4-208ENST00000549040 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
RFX4-208ENST00000549040 KRTAP4-1Q9BYQ7 146 aa4.3□□□□□ -1.72
RFX4-208ENST00000549040 WFDC13Q8IUB5 93 aa4.29□□□□□ -1.72
RFX4-208ENST00000549040 TMEM254Q8TBM7 123 aa4.29□□□□□ -1.72
RFX4-208ENST00000549040 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
RFX4-208ENST00000549040 A0A087WVE0 104 aa4.28□□□□□ -1.72
RFX4-208ENST00000549040 HCG22E2RYF7 251 aa4.28□□□□□ -1.72
RFX4-208ENST00000549040 PCOTHQ58A44 107 aa4.28□□□□□ -1.72
RFX4-208ENST00000549040 CASC2Q6XLA1 102 aa4.28□□□□□ -1.72
RFX4-208ENST00000549040 HIST1H4AP62805 103 aaKnown RBP4.27□□□□□ -1.73
RFX4-208ENST00000549040 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
RFX4-208ENST00000549040 SEC61BP60468 96 aaKnown RBP4.26□□□□□ -1.73
RFX4-208ENST00000549040 FAT4Q6V0I7 4981 aa4.26□□□□□ -1.73
RFX4-208ENST00000549040 Q5W150 140 aa4.25□□□□□ -1.73
RFX4-208ENST00000549040 MUC2Q02817 5179 aa4.25□□□□□ -1.73
RFX4-208ENST00000549040 IMUPQ9GZP8 106 aa4.24□□□□□ -1.73
RFX4-208ENST00000549040 ATP11AUNQ6ZP68 121 aa4.23□□□□□ -1.73
RFX4-208ENST00000549040 ZCCHC13Q8WW36 166 aaKnown RBP4.23□□□□□ -1.73
RFX4-208ENST00000549040 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
RFX4-208ENST00000549040 NDUFS5O43920 106 aa4.2□□□□□ -1.74
RFX4-208ENST00000549040 OCR1Q9BZK8 76 aa4.19□□□□□ -1.74
RFX4-208ENST00000549040 TP53AIP1Q9HCN2 124 aa4.18□□□□□ -1.74
RFX4-208ENST00000549040 KRTAP19-2Q3LHN2 52 aa4.17□□□□□ -1.74
RFX4-208ENST00000549040 SPINK7P58062 85 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms