RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 NBASA2RRP1 2371 aa0.36□□□□□ -2.35
CNOT2-215ENST00000548863 HIVEP3Q5T1R4 2406 aa0.35□□□□□ -2.35
CNOT2-215ENST00000548863 TNXBP22105 4242 aa0.35□□□□□ -2.35
CNOT2-215ENST00000548863 H3BNG1 76 aa0.35□□□□□ -2.35
CNOT2-215ENST00000548863 USP24Q9UPU5 2620 aa0.35□□□□□ -2.35
CNOT2-215ENST00000548863 FRAS1Q86XX4 4008 aa0.35□□□□□ -2.35
CNOT2-215ENST00000548863 TNP1P09430 55 aa0.34□□□□□ -2.36
CNOT2-215ENST00000548863 ANK2Q01484 3957 aa0.34□□□□□ -2.36
CNOT2-215ENST00000548863 TNRC18O15417 2968 aaPredicted RBP0.34□□□□□ -2.36
CNOT2-215ENST00000548863 FSIP2Q5CZC0 6907 aa0.34□□□□□ -2.36
CNOT2-215ENST00000548863 OTOGQ6ZRI0 2925 aa0.34□□□□□ -2.36
CNOT2-215ENST00000548863 ACANP16112 2415 aa0.33□□□□□ -2.36
CNOT2-215ENST00000548863 TTTY10Q9BZA0 68 aa0.33□□□□□ -2.36
CNOT2-215ENST00000548863 WNK1Q9H4A3 2382 aa0.33□□□□□ -2.36
CNOT2-215ENST00000548863 UBR5O95071 2799 aaPredicted RBP0.33□□□□□ -2.36
CNOT2-215ENST00000548863 SRRM2Q9UQ35 2752 aaKnown RBP0.33□□□□□ -2.36
CNOT2-215ENST00000548863 NAV2Q8IVL1 2488 aa0.32□□□□□ -2.36
CNOT2-215ENST00000548863 SETXQ7Z333 2677 aaKnown RBP0.32□□□□□ -2.36
CNOT2-215ENST00000548863 DMBT1Q9UGM3 2413 aaPredicted RBP0.32□□□□□ -2.36
CNOT2-215ENST00000548863 DEFB110Q30KQ9 67 aa0.32□□□□□ -2.36
CNOT2-215ENST00000548863 APC2O95996 2303 aa0.32□□□□□ -2.36
CNOT2-215ENST00000548863 ACACAQ13085 2346 aa0.31□□□□□ -2.36
CNOT2-215ENST00000548863 PCLOQ9Y6V0 5065 aa0.31□□□□□ -2.36
CNOT2-215ENST00000548863 PKD1L1Q8TDX9 2849 aa0.31□□□□□ -2.36
CNOT2-215ENST00000548863 SPRR2DP22532 72 aa0.31□□□□□ -2.36
CNOT2-215ENST00000548863 MTORP42345 2549 aa0.31□□□□□ -2.36
CNOT2-215ENST00000548863 CELSR1Q9NYQ6 3014 aa0.31□□□□□ -2.36
CNOT2-215ENST00000548863 SETD2Q9BYW2 2564 aaPredicted RBP0.31□□□□□ -2.36
CNOT2-215ENST00000548863 GCN1Q92616 2671 aaKnown RBP0.3□□□□□ -2.36
CNOT2-215ENST00000548863 LINC01590Q5TEZ4 76 aa0.3□□□□□ -2.36
CNOT2-215ENST00000548863 DEFB104AQ8WTQ1 72 aa0.3□□□□□ -2.36
CNOT2-215ENST00000548863 BSNQ9UPA5 3926 aa0.3□□□□□ -2.36
CNOT2-215ENST00000548863 MACF1Q9UPN3 7388 aaKnown RBP0.29□□□□□ -2.36
CNOT2-215ENST00000548863 RIF1Q5UIP0 2472 aaKnown RBP0.29□□□□□ -2.36
CNOT2-215ENST00000548863 NF1P21359 2839 aa0.29□□□□□ -2.36
CNOT2-215ENST00000548863 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
CNOT2-215ENST00000548863 SPTBN4Q9H254 2564 aa0.29□□□□□ -2.36
CNOT2-215ENST00000548863 COL6A5A8TX70 2615 aa0.29□□□□□ -2.36
CNOT2-215ENST00000548863 NSD1Q96L73 2696 aaPredicted RBP0.29□□□□□ -2.36
CNOT2-215ENST00000548863 FLNCQ14315 2725 aa0.29□□□□□ -2.36
CNOT2-215ENST00000548863 H3BSH0 61 aa0.29□□□□□ -2.36
CNOT2-215ENST00000548863 SPART-AS1P0CW21 52 aa0.29□□□□□ -2.36
CNOT2-215ENST00000548863 SPRR2BP35325 72 aa0.29□□□□□ -2.36
CNOT2-215ENST00000548863 PRCDQ00LT1 54 aa0.29□□□□□ -2.36
CNOT2-215ENST00000548863 FLNBO75369 2602 aaKnown RBP0.29□□□□□ -2.36
CNOT2-215ENST00000548863 LRRK2Q5S007 2527 aa0.28□□□□□ -2.36
CNOT2-215ENST00000548863 EPG5Q9HCE0 2579 aa0.28□□□□□ -2.36
CNOT2-215ENST00000548863 STAB1Q9NY15 2570 aa0.28□□□□□ -2.36
CNOT2-215ENST00000548863 COL6A3P12111 3177 aa0.28□□□□□ -2.36
CNOT2-215ENST00000548863 FAT2Q9NYQ8 4349 aa0.28□□□□□ -2.36
CNOT2-215ENST00000548863 ANKHD1Q8IWZ3 2542 aaKnown RBP0.28□□□□□ -2.36
CNOT2-215ENST00000548863 UBR4Q5T4S7 5183 aa0.28□□□□□ -2.37
CNOT2-215ENST00000548863 FAM186AA6NE01 2351 aa0.27□□□□□ -2.37
CNOT2-215ENST00000548863 A0A0C4DFX4 3053 aa0.27□□□□□ -2.37
CNOT2-215ENST00000548863 PRKDCP78527 4128 aaKnown RBP0.27□□□□□ -2.37
CNOT2-215ENST00000548863 SONP18583 2426 aaKnown RBP0.27□□□□□ -2.37
CNOT2-215ENST00000548863 PDZD2O15018 2839 aa0.27□□□□□ -2.37
CNOT2-215ENST00000548863 MUC2Q02817 5179 aa0.26□□□□□ -2.37
CNOT2-215ENST00000548863 SPG11Q96JI7 2443 aa0.26□□□□□ -2.37
CNOT2-215ENST00000548863 CCDC168Q8NDH2 2452 aa0.26□□□□□ -2.37
CNOT2-215ENST00000548863 IGSF10Q6WRI0 2623 aa0.26□□□□□ -2.37
CNOT2-215ENST00000548863 UTP20O75691 2785 aaKnown RBP0.26□□□□□ -2.37
CNOT2-215ENST00000548863 SYNE1Q8NF91 8797 aaKnown RBP0.26□□□□□ -2.37
CNOT2-215ENST00000548863 LYSTQ99698 3801 aa0.26□□□□□ -2.37
CNOT2-215ENST00000548863 ANKRD11Q6UB99 2663 aaPredicted RBP0.25□□□□□ -2.37
CNOT2-215ENST00000548863 K7EIM0 57 aa0.25□□□□□ -2.37
CNOT2-215ENST00000548863 SPRR2AP35326 72 aa0.25□□□□□ -2.37
CNOT2-215ENST00000548863 KRTAP6-2Q3LI66 62 aa0.25□□□□□ -2.37
CNOT2-215ENST00000548863 HRNRQ86YZ3 2850 aaPredicted RBP0.25□□□□□ -2.37
CNOT2-215ENST00000548863 FASNP49327 2511 aaKnown RBP0.25□□□□□ -2.37
CNOT2-215ENST00000548863 DSTQ03001 7570 aaKnown RBP0.25□□□□□ -2.37
CNOT2-215ENST00000548863 HUWE1Q7Z6Z7 4374 aaKnown RBP0.24□□□□□ -2.37
CNOT2-215ENST00000548863 NEBP20929 6669 aa0.24□□□□□ -2.37
CNOT2-215ENST00000548863 ACACBO00763 2458 aa0.24□□□□□ -2.37
CNOT2-215ENST00000548863 DMXL1Q9Y485 3027 aa0.24□□□□□ -2.37
CNOT2-215ENST00000548863 MT1AP04731 61 aa0.24□□□□□ -2.37
CNOT2-215ENST00000548863 KRTAP8-1Q8IUC2 63 aa0.24□□□□□ -2.37
CNOT2-215ENST00000548863 TENM2Q9NT68 2774 aa0.23□□□□□ -2.37
CNOT2-215ENST00000548863 KIAA1109Q2LD37 5005 aa0.23□□□□□ -2.37
CNOT2-215ENST00000548863 USP9YO00507 2555 aaPredicted RBP0.23□□□□□ -2.37
CNOT2-215ENST00000548863 ZZEF1O43149 2961 aa0.23□□□□□ -2.37
CNOT2-215ENST00000548863 MAST4O15021 2626 aa0.23□□□□□ -2.37
CNOT2-215ENST00000548863 TEP1Q99973 2627 aaKnown RBP0.23□□□□□ -2.37
CNOT2-215ENST00000548863 TACC2O95359 2948 aa0.23□□□□□ -2.37
CNOT2-215ENST00000548863 SSPOA2VEC9 5147 aa0.23□□□□□ -2.37
CNOT2-215ENST00000548863 VPS13BQ7Z7G8 4022 aa0.22□□□□□ -2.37
CNOT2-215ENST00000548863 KMT2AQ03164 3969 aa0.22□□□□□ -2.37
CNOT2-215ENST00000548863 TMEM167AQ8TBQ9 72 aa0.22□□□□□ -2.37
CNOT2-215ENST00000548863 MYO18BQ8IUG5 2567 aa0.22□□□□□ -2.37
CNOT2-215ENST00000548863 NBEAL2Q6ZNJ1 2754 aa0.22□□□□□ -2.37
CNOT2-215ENST00000548863 CUBNO60494 3623 aa0.21□□□□□ -2.38
CNOT2-215ENST00000548863 LRP1Q07954 4544 aaKnown RBP0.21□□□□□ -2.38
CNOT2-215ENST00000548863 FLNAP21333 2647 aaKnown RBP0.21□□□□□ -2.38
CNOT2-215ENST00000548863 DCHS2Q6V1P9 2916 aa0.21□□□□□ -2.38
CNOT2-215ENST00000548863 MYCBP2O75592 4640 aa0.21□□□□□ -2.38
CNOT2-215ENST00000548863 TLN2Q9Y4G6 2542 aa0.21□□□□□ -2.38
CNOT2-215ENST00000548863 KMT2CQ8NEZ4 4911 aaKnown RBP0.21□□□□□ -2.38
CNOT2-215ENST00000548863 HIVEP1P15822 2718 aa0.21□□□□□ -2.38
CNOT2-215ENST00000548863 CHD7Q9P2D1 2997 aa0.21□□□□□ -2.38
CNOT2-215ENST00000548863 COL7A1Q02388 2944 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 337 ms