RNA–Protein interactions for RNA: ENST00000548855.5

PDE1B-205, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best)

Gene PDE1B, Length 4,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-205ENST00000548855 COX6B2Q6YFQ2 88 aa7.71□□□□□ -1.17
PDE1B-205ENST00000548855 RBM12B-AS1Q9P1G2 102 aa7.71□□□□□ -1.18
PDE1B-205ENST00000548855 CSMD1Q96PZ7 3565 aa7.7□□□□□ -1.18
PDE1B-205ENST00000548855 KRTAP13-1Q8IUC0 172 aa7.69□□□□□ -1.18
PDE1B-205ENST00000548855 CDC42SE1Q9NRR8 79 aa7.68□□□□□ -1.18
PDE1B-205ENST00000548855 OXTP01178 125 aa7.68□□□□□ -1.18
PDE1B-205ENST00000548855 Q5VSD8 79 aa7.66□□□□□ -1.18
PDE1B-205ENST00000548855 Q6ZSA8 131 aa7.65□□□□□ -1.19
PDE1B-205ENST00000548855 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.19
PDE1B-205ENST00000548855 OTOGQ6ZRI0 2925 aa7.64□□□□□ -1.19
PDE1B-205ENST00000548855 NOTCH2NLQ7Z3S9 236 aa7.64□□□□□ -1.19
PDE1B-205ENST00000548855 VWFP04275 2813 aa7.63□□□□□ -1.19
PDE1B-205ENST00000548855 Q75L30 129 aa7.63□□□□□ -1.19
PDE1B-205ENST00000548855 SPINK7P58062 85 aa7.62□□□□□ -1.19
PDE1B-205ENST00000548855 SVEP1Q4LDE5 3571 aa7.6□□□□□ -1.19
PDE1B-205ENST00000548855 NBPF19A0A087WUL8 3843 aa7.59□□□□□ -1.19
PDE1B-205ENST00000548855 FBN1P35555 2871 aaKnown RBP7.59□□□□□ -1.19
PDE1B-205ENST00000548855 ASB16-AS1Q495Z4 193 aa7.59□□□□□ -1.19
PDE1B-205ENST00000548855 Q5VV11 94 aa7.56□□□□□ -1.2
PDE1B-205ENST00000548855 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
PDE1B-205ENST00000548855 KRTAP13-2Q52LG2 175 aa7.56□□□□□ -1.2
PDE1B-205ENST00000548855 KTN1-AS1Q86SY8 53 aa7.56□□□□□ -1.2
PDE1B-205ENST00000548855 SPENQ96T58 3664 aaKnown RBP7.56□□□□□ -1.2
PDE1B-205ENST00000548855 A0A0D9SG42 100 aa7.56□□□□□ -1.2
PDE1B-205ENST00000548855 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
PDE1B-205ENST00000548855 A0A1B0GU33 70 aa7.55□□□□□ -1.2
PDE1B-205ENST00000548855 LINC01554Q52M75 96 aa7.5□□□□□ -1.21
PDE1B-205ENST00000548855 PKD1L1Q8TDX9 2849 aa7.49□□□□□ -1.21
PDE1B-205ENST00000548855 SPINT4Q6UDR6 99 aa7.48□□□□□ -1.21
PDE1B-205ENST00000548855 RPS29P62273 56 aaKnown RBP7.48□□□□□ -1.21
PDE1B-205ENST00000548855 ZFHX3Q15911 3703 aa7.48□□□□□ -1.21
PDE1B-205ENST00000548855 BSNQ9UPA5 3926 aa7.47□□□□□ -1.21
PDE1B-205ENST00000548855 TENM2Q9NT68 2774 aa7.46□□□□□ -1.22
PDE1B-205ENST00000548855 CRIPTQ9P021 101 aa7.46□□□□□ -1.22
PDE1B-205ENST00000548855 S4R3F8 94 aa7.45□□□□□ -1.22
PDE1B-205ENST00000548855 CSMD2Q7Z408 3487 aa7.44□□□□□ -1.22
PDE1B-205ENST00000548855 CSAG1Q6PB30 78 aa7.44□□□□□ -1.22
PDE1B-205ENST00000548855 LCA10Q71F78 164 aa7.43□□□□□ -1.22
PDE1B-205ENST00000548855 TGP01266 2768 aa7.43□□□□□ -1.22
PDE1B-205ENST00000548855 CUBNO60494 3623 aa7.41□□□□□ -1.22
PDE1B-205ENST00000548855 SEC61BP60468 96 aaKnown RBP7.39□□□□□ -1.23
PDE1B-205ENST00000548855 ANK3Q12955 4377 aaKnown RBP7.33□□□□□ -1.24
PDE1B-205ENST00000548855 KRTAP1-4P0C5Y4 121 aa7.32□□□□□ -1.24
PDE1B-205ENST00000548855 H1FX-AS1Q4G0G2 97 aa7.26□□□□□ -1.25
PDE1B-205ENST00000548855 M0R2T5 61 aa7.25□□□□□ -1.25
PDE1B-205ENST00000548855 PRAC1Q96KF2 57 aa7.25□□□□□ -1.25
PDE1B-205ENST00000548855 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
PDE1B-205ENST00000548855 R4GN34 69 aa7.24□□□□□ -1.25
PDE1B-205ENST00000548855 TRRAPQ9Y4A5 3859 aa7.24□□□□□ -1.25
PDE1B-205ENST00000548855 RPL37P61927 97 aaKnown RBP7.21□□□□□ -1.26
PDE1B-205ENST00000548855 A8MUU9 505 aa7.21□□□□□ -1.26
PDE1B-205ENST00000548855 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
PDE1B-205ENST00000548855 SPATA8Q6RVD6 105 aa7.19□□□□□ -1.26
PDE1B-205ENST00000548855 ADM2Q7Z4H4 148 aa7.15□□□□□ -1.27
PDE1B-205ENST00000548855 M0QZ58 72 aa7.13□□□□□ -1.27
PDE1B-205ENST00000548855 A8MU10 97 aa7.08□□□□□ -1.28
PDE1B-205ENST00000548855 KRTAP16-1A8MUX0 517 aa7.07□□□□□ -1.28
PDE1B-205ENST00000548855 ROMO1P60602 79 aa7.07□□□□□ -1.28
PDE1B-205ENST00000548855 FBN3Q75N90 2809 aa7.06□□□□□ -1.28
PDE1B-205ENST00000548855 A6NN06 94 aa7.02□□□□□ -1.29
PDE1B-205ENST00000548855 XP32Q5T750 250 aa7.02□□□□□ -1.29
PDE1B-205ENST00000548855 VPS13CQ709C8 3753 aa7□□□□□ -1.29
PDE1B-205ENST00000548855 A0A1B0GVY2 172 aa7□□□□□ -1.29
PDE1B-205ENST00000548855 H3BS24 57 aa6.99□□□□□ -1.29
PDE1B-205ENST00000548855 SRRM2Q9UQ35 2752 aaKnown RBP6.98□□□□□ -1.29
PDE1B-205ENST00000548855 MEGF8Q7Z7M0 2845 aa6.96□□□□□ -1.3
PDE1B-205ENST00000548855 KRTAP13-3Q3SY46 172 aa6.92□□□□□ -1.3
PDE1B-205ENST00000548855 ZNF469Q96JG9 3925 aaPredicted RBP6.92□□□□□ -1.3
PDE1B-205ENST00000548855 LUZP6Q538Z0 58 aa6.91□□□□□ -1.3
PDE1B-205ENST00000548855 KRTAP10-8P60410 259 aa6.88□□□□□ -1.31
PDE1B-205ENST00000548855 TPRXLQ17RH7 258 aa6.88□□□□□ -1.31
PDE1B-205ENST00000548855 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
PDE1B-205ENST00000548855 COL7A1Q02388 2944 aa6.82□□□□□ -1.32
PDE1B-205ENST00000548855 KRTAP25-1Q3LHN0 102 aa6.8□□□□□ -1.32
PDE1B-205ENST00000548855 HUWE1Q7Z6Z7 4374 aaKnown RBP6.77□□□□□ -1.32
PDE1B-205ENST00000548855 H0YAA0 97 aa6.75□□□□□ -1.33
PDE1B-205ENST00000548855 AKAP9Q99996 3911 aa6.73□□□□□ -1.33
PDE1B-205ENST00000548855 P0C880 135 aa6.65□□□□□ -1.35
PDE1B-205ENST00000548855 KRTAP3-1Q9BYR8 98 aa6.57□□□□□ -1.36
PDE1B-205ENST00000548855 DNAH9Q9NYC9 4486 aa6.55□□□□□ -1.36
PDE1B-205ENST00000548855 TNP1P09430 55 aa6.55□□□□□ -1.36
PDE1B-205ENST00000548855 CSMD3Q7Z407 3707 aa6.54□□□□□ -1.36
PDE1B-205ENST00000548855 C10orf95Q9H7T3 257 aa6.51□□□□□ -1.37
PDE1B-205ENST00000548855 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
PDE1B-205ENST00000548855 MT1HL1P0DM35 61 aa6.45□□□□□ -1.38
PDE1B-205ENST00000548855 A0A0A0MQY5 61 aa6.45□□□□□ -1.38
PDE1B-205ENST00000548855 PLECQ15149 4684 aaKnown RBP6.42□□□□□ -1.38
PDE1B-205ENST00000548855 KRTAP10-10P60014 251 aa6.41□□□□□ -1.38
PDE1B-205ENST00000548855 PP632Q6XCG6 107 aa6.4□□□□□ -1.39
PDE1B-205ENST00000548855 DNHD1Q96M86 4753 aa6.37□□□□□ -1.39
PDE1B-205ENST00000548855 NDUFAF8A1L188 74 aa6.35□□□□□ -1.39
PDE1B-205ENST00000548855 KRTAP12-2P59991 146 aa6.34□□□□□ -1.39
PDE1B-205ENST00000548855 DNAH1Q9P2D7 4330 aa6.34□□□□□ -1.39
PDE1B-205ENST00000548855 DNAH5Q8TE73 4624 aa6.33□□□□□ -1.4
PDE1B-205ENST00000548855 ALMS1Q8TCU4 4167 aa6.32□□□□□ -1.4
PDE1B-205ENST00000548855 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
PDE1B-205ENST00000548855 DNAH11Q96DT5 4516 aa6.29□□□□□ -1.4
PDE1B-205ENST00000548855 KRTAP12-1P59990 96 aa6.28□□□□□ -1.4
PDE1B-205ENST00000548855 KRTAP4-5Q9BYR2 181 aa6.27□□□□□ -1.41
PDE1B-205ENST00000548855 DNAH10Q8IVF4 4471 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms