RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 NOTCH2NLQ7Z3S9 236 aa5.93□□□□□ -1.46
TRAFD1-205ENST00000548277 LINC00472Q9H8W2 130 aa5.93□□□□□ -1.46
TRAFD1-205ENST00000548277 UQCR10Q9UDW1 63 aa5.93□□□□□ -1.46
TRAFD1-205ENST00000548277 SCGB1C2P0DMR2 95 aa5.92□□□□□ -1.46
TRAFD1-205ENST00000548277 UBE2V1Q13404 147 aa5.92□□□□□ -1.46
TRAFD1-205ENST00000548277 HRES1P13985 223 aa5.91□□□□□ -1.46
TRAFD1-205ENST00000548277 TMA7Q9Y2S6 64 aaKnown RBP5.91□□□□□ -1.46
TRAFD1-205ENST00000548277 IGHV6-1A0A0B4J1U7 121 aa5.9□□□□□ -1.46
TRAFD1-205ENST00000548277 VPS25Q9BRG1 176 aa5.9□□□□□ -1.46
TRAFD1-205ENST00000548277 RBM3P98179 157 aaKnown RBP5.89□□□□□ -1.47
TRAFD1-205ENST00000548277 MPLKIPQ8TAP9 179 aa5.87□□□□□ -1.47
TRAFD1-205ENST00000548277 DSCR8Q96T75 97 aa5.87□□□□□ -1.47
TRAFD1-205ENST00000548277 BAALC-AS2P0C853 105 aa5.86□□□□□ -1.47
TRAFD1-205ENST00000548277 A0A1B0GVX0 72 aa5.84□□□□□ -1.47
TRAFD1-205ENST00000548277 LINC00846Q9NV44 126 aa5.84□□□□□ -1.47
TRAFD1-205ENST00000548277 C9JAW5 83 aa5.83□□□□□ -1.48
TRAFD1-205ENST00000548277 C8orf87E5RJ46 101 aa5.83□□□□□ -1.48
TRAFD1-205ENST00000548277 Q6ZQT0 140 aa5.81□□□□□ -1.48
TRAFD1-205ENST00000548277 MTURNQ8N3F0 131 aa5.81□□□□□ -1.48
TRAFD1-205ENST00000548277 J3KT08 172 aa5.8□□□□□ -1.48
TRAFD1-205ENST00000548277 C21orf62-AS1Q17RA5 79 aa5.8□□□□□ -1.48
TRAFD1-205ENST00000548277 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
TRAFD1-205ENST00000548277 NAA38Q9BRA0 125 aaKnown RBP5.8□□□□□ -1.48
TRAFD1-205ENST00000548277 ATXN8Q156A1 80 aa5.78□□□□□ -1.48
TRAFD1-205ENST00000548277 ZCCHC13Q8WW36 166 aaKnown RBP5.78□□□□□ -1.48
TRAFD1-205ENST00000548277 M0R143 59 aa5.77□□□□□ -1.49
TRAFD1-205ENST00000548277 NDUFB1O75438 58 aa5.77□□□□□ -1.49
TRAFD1-205ENST00000548277 JMJD7-PLA2G4BH0Y9G9 81 aa5.76□□□□□ -1.49
TRAFD1-205ENST00000548277 SPINK7P58062 85 aa5.76□□□□□ -1.49
TRAFD1-205ENST00000548277 Q8N9P0 234 aaPredicted RBP5.76□□□□□ -1.49
TRAFD1-205ENST00000548277 LOC110117498A0A087WWA1 95 aa5.74□□□□□ -1.49
TRAFD1-205ENST00000548277 A8MWP4 228 aa5.73□□□□□ -1.49
TRAFD1-205ENST00000548277 C14orf132Q9NPU4 83 aa5.73□□□□□ -1.49
TRAFD1-205ENST00000548277 C8orf17Q9NRJ1 99 aa5.73□□□□□ -1.49
TRAFD1-205ENST00000548277 IGKV3D-7A0A0C4DH55 119 aa5.72□□□□□ -1.49
TRAFD1-205ENST00000548277 A0A1B0GW54 56 aa5.72□□□□□ -1.49
TRAFD1-205ENST00000548277 PDE6GP18545 87 aa5.72□□□□□ -1.49
TRAFD1-205ENST00000548277 LYRM7Q5U5X0 104 aa5.72□□□□□ -1.49
TRAFD1-205ENST00000548277 KRTAP6-3Q3LI67 103 aa5.71□□□□□ -1.5
TRAFD1-205ENST00000548277 WFDC13Q8IUB5 93 aa5.7□□□□□ -1.5
TRAFD1-205ENST00000548277 NREPQ16612 68 aa5.68□□□□□ -1.5
TRAFD1-205ENST00000548277 Q6ZVQ6 151 aa5.68□□□□□ -1.5
TRAFD1-205ENST00000548277 SMIM6P0DI80 62 aa5.67□□□□□ -1.5
TRAFD1-205ENST00000548277 BATFQ16520 125 aa5.67□□□□□ -1.5
TRAFD1-205ENST00000548277 PRR15Q8IV56 129 aa5.67□□□□□ -1.5
TRAFD1-205ENST00000548277 MMP24-AS1A0A0U1RRL7 71 aa5.63□□□□□ -1.51
TRAFD1-205ENST00000548277 TSTD3H0UI37 97 aa5.63□□□□□ -1.51
TRAFD1-205ENST00000548277 TMEM254Q8TBM7 123 aa5.63□□□□□ -1.51
TRAFD1-205ENST00000548277 MRPL34Q9BQ48 92 aaKnown RBP5.63□□□□□ -1.51
TRAFD1-205ENST00000548277 hDV103S1A0JD37 113 aa5.61□□□□□ -1.51
TRAFD1-205ENST00000548277 C9orf118A6NHY6 69 aa5.6□□□□□ -1.51
TRAFD1-205ENST00000548277 H3BT86 120 aa5.6□□□□□ -1.51
TRAFD1-205ENST00000548277 K7EQZ3 153 aa5.6□□□□□ -1.51
TRAFD1-205ENST00000548277 NDUFS5O43920 106 aa5.6□□□□□ -1.51
TRAFD1-205ENST00000548277 A0A1W2PPM0 123 aa5.58□□□□□ -1.52
TRAFD1-205ENST00000548277 TAX1BP3O14907 124 aa5.58□□□□□ -1.52
TRAFD1-205ENST00000548277 H1FX-AS1Q4G0G2 97 aa5.57□□□□□ -1.52
TRAFD1-205ENST00000548277 BPY2O14599 106 aa5.56□□□□□ -1.52
TRAFD1-205ENST00000548277 IGKV2D-30A0A075B6S6 120 aa5.54□□□□□ -1.52
TRAFD1-205ENST00000548277 IGKV2-30P06310 120 aa5.54□□□□□ -1.52
TRAFD1-205ENST00000548277 Q5W150 140 aa5.54□□□□□ -1.52
TRAFD1-205ENST00000548277 NEBP20929 6669 aa5.53□□□□□ -1.52
TRAFD1-205ENST00000548277 Q8N9L7 120 aa5.52□□□□□ -1.53
TRAFD1-205ENST00000548277 LOC105371267A0A1B0GV96 52 aa5.51□□□□□ -1.53
TRAFD1-205ENST00000548277 A6NN06 94 aa5.5□□□□□ -1.53
TRAFD1-205ENST00000548277 CASC2Q6XLA1 102 aa5.5□□□□□ -1.53
TRAFD1-205ENST00000548277 C7orf65Q6ZTY9 151 aa5.5□□□□□ -1.53
TRAFD1-205ENST00000548277 SPCS1Q9Y6A9 102 aa5.5□□□□□ -1.53
TRAFD1-205ENST00000548277 HCG22E2RYF7 251 aa5.49□□□□□ -1.53
TRAFD1-205ENST00000548277 MUC12Q9UKN1 5478 aa5.49□□□□□ -1.53
TRAFD1-205ENST00000548277 SMCPP49901 116 aaPredicted RBP5.48□□□□□ -1.53
TRAFD1-205ENST00000548277 FAM236AA0A1B0GUQ0 79 aa5.46□□□□□ -1.54
TRAFD1-205ENST00000548277 FAM236BA0A1B0GV22 79 aa5.46□□□□□ -1.54
TRAFD1-205ENST00000548277 C4orf26Q17RF5 130 aa5.45□□□□□ -1.54
TRAFD1-205ENST00000548277 KRTAP20-1Q3LI63 56 aa5.45□□□□□ -1.54
TRAFD1-205ENST00000548277 CXCL6P80162 114 aa5.44□□□□□ -1.54
TRAFD1-205ENST00000548277 C5orf47Q569G3 176 aa5.44□□□□□ -1.54
TRAFD1-205ENST00000548277 UBL5Q9BZL1 73 aa5.43□□□□□ -1.54
TRAFD1-205ENST00000548277 MT1BP07438 61 aa5.42□□□□□ -1.54
TRAFD1-205ENST00000548277 PRO0461Q9UI25 63 aa5.42□□□□□ -1.54
TRAFD1-205ENST00000548277 Q5VV11 94 aa5.41□□□□□ -1.54
TRAFD1-205ENST00000548277 COL5A1-AS1Q5SY13 56 aa5.4□□□□□ -1.54
TRAFD1-205ENST00000548277 K7EP34 96 aa5.38□□□□□ -1.55
TRAFD1-205ENST00000548277 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
TRAFD1-205ENST00000548277 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
TRAFD1-205ENST00000548277 C1orf64Q8NEQ6 169 aa5.34□□□□□ -1.55
TRAFD1-205ENST00000548277 KRTAP19-8Q3LI54 63 aa5.33□□□□□ -1.56
TRAFD1-205ENST00000548277 S4R3F8 94 aa5.33□□□□□ -1.56
TRAFD1-205ENST00000548277 CSAG1Q6PB30 78 aa5.31□□□□□ -1.56
TRAFD1-205ENST00000548277 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
TRAFD1-205ENST00000548277 TP53AIP1Q9HCN2 124 aa5.31□□□□□ -1.56
TRAFD1-205ENST00000548277 GTF2H5Q6ZYL4 71 aa5.3□□□□□ -1.56
TRAFD1-205ENST00000548277 LCA10Q71F78 164 aa5.3□□□□□ -1.56
TRAFD1-205ENST00000548277 IMUPQ9GZP8 106 aa5.3□□□□□ -1.56
TRAFD1-205ENST00000548277 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
TRAFD1-205ENST00000548277 ETDBQ3ZM63 59 aa5.29□□□□□ -1.56
TRAFD1-205ENST00000548277 F8W1H4 67 aa5.28□□□□□ -1.56
TRAFD1-205ENST00000548277 KLKP1Q107X0 134 aa5.25□□□□□ -1.57
TRAFD1-205ENST00000548277 CYP4F30PQ9H0H9 118 aa5.24□□□□□ -1.57
TRAFD1-205ENST00000548277 KRTAP2-3P0C7H8 128 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 200.9 ms