RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 TRAV23DV6A0A075B6W5 121 aa8.07□□□□□ -1.12
PTPRB-205ENST00000547715 SPINK1P00995 79 aa8.07□□□□□ -1.12
PTPRB-205ENST00000547715 VPREB1P12018 145 aa8.07□□□□□ -1.12
PTPRB-205ENST00000547715 RBM3P98179 157 aaKnown RBP8.07□□□□□ -1.12
PTPRB-205ENST00000547715 NCR3O14931 201 aa8.06□□□□□ -1.12
PTPRB-205ENST00000547715 KRTAP19-2Q3LHN2 52 aa8.06□□□□□ -1.12
PTPRB-205ENST00000547715 XP32Q5T750 250 aa8.05□□□□□ -1.12
PTPRB-205ENST00000547715 C1orf195Q5TG92 126 aa8.05□□□□□ -1.12
PTPRB-205ENST00000547715 ZNF706Q9Y5V0 76 aaPredicted RBP8.05□□□□□ -1.12
PTPRB-205ENST00000547715 LCE2BO14633 110 aa8.04□□□□□ -1.12
PTPRB-205ENST00000547715 TRBV7-6A0A0J9YX20 115 aa8.03□□□□□ -1.12
PTPRB-205ENST00000547715 A0A0U1RRA0 63 aa8.03□□□□□ -1.12
PTPRB-205ENST00000547715 A0A1B0GW54 56 aa8.03□□□□□ -1.12
PTPRB-205ENST00000547715 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
PTPRB-205ENST00000547715 Q6ZQT0 140 aa8.03□□□□□ -1.12
PTPRB-205ENST00000547715 SEC61GP60059 68 aa8.01□□□□□ -1.13
PTPRB-205ENST00000547715 KRTAP10-6P60371 365 aaPredicted RBP8.01□□□□□ -1.13
PTPRB-205ENST00000547715 Q8N377 158 aa8□□□□□ -1.13
PTPRB-205ENST00000547715 Q8NDZ9 215 aa8□□□□□ -1.13
PTPRB-205ENST00000547715 KRTAP9-7A8MTY7 169 aa7.99□□□□□ -1.13
PTPRB-205ENST00000547715 F8WEM9 126 aa7.99□□□□□ -1.13
PTPRB-205ENST00000547715 LINC00575Q6W349 94 aa7.98□□□□□ -1.13
PTPRB-205ENST00000547715 TRBV7-4A0A0J9YYF1 115 aa7.97□□□□□ -1.13
PTPRB-205ENST00000547715 RPS29P62273 56 aaKnown RBP7.97□□□□□ -1.13
PTPRB-205ENST00000547715 IGLV8-61A0A075B6I0 122 aa7.96□□□□□ -1.14
PTPRB-205ENST00000547715 M0R2T5 61 aa7.96□□□□□ -1.14
PTPRB-205ENST00000547715 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.96□□□□□ -1.14
PTPRB-205ENST00000547715 Q6ZVQ6 151 aa7.96□□□□□ -1.14
PTPRB-205ENST00000547715 IGLV9-49A0A0B4J1Y8 123 aa7.95□□□□□ -1.14
PTPRB-205ENST00000547715 MOBPQ13875 183 aa7.95□□□□□ -1.14
PTPRB-205ENST00000547715 PCOTHQ58A44 107 aa7.95□□□□□ -1.14
PTPRB-205ENST00000547715 PRR15Q8IV56 129 aa7.95□□□□□ -1.14
PTPRB-205ENST00000547715 TMEM254Q8TBM7 123 aa7.95□□□□□ -1.14
PTPRB-205ENST00000547715 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.93□□□□□ -1.14
PTPRB-205ENST00000547715 NREPQ16612 68 aa7.93□□□□□ -1.14
PTPRB-205ENST00000547715 BRK1Q8WUW1 75 aa7.93□□□□□ -1.14
PTPRB-205ENST00000547715 PRYO14603 147 aa7.92□□□□□ -1.14
PTPRB-205ENST00000547715 LINC00483Q53H64 154 aa7.92□□□□□ -1.14
PTPRB-205ENST00000547715 SSBP3-AS1Q7Z2R9 100 aa7.92□□□□□ -1.14
PTPRB-205ENST00000547715 BPY2O14599 106 aa7.9□□□□□ -1.14
PTPRB-205ENST00000547715 ETDCA0A1B0GVM5 59 aa7.89□□□□□ -1.15
PTPRB-205ENST00000547715 Q1T7F1 81 aa7.89□□□□□ -1.15
PTPRB-205ENST00000547715 COX7BP24311 80 aa7.88□□□□□ -1.15
PTPRB-205ENST00000547715 SPRR1AP35321 89 aa7.88□□□□□ -1.15
PTPRB-205ENST00000547715 KRTAP4-16G5E9R7 235 aaPredicted RBP7.86□□□□□ -1.15
PTPRB-205ENST00000547715 PMAIP1Q13794 54 aa7.86□□□□□ -1.15
PTPRB-205ENST00000547715 C6orf99Q4VX62 202 aa7.86□□□□□ -1.15
PTPRB-205ENST00000547715 KCNQ1DNQ9H478 68 aa7.86□□□□□ -1.15
PTPRB-205ENST00000547715 SNURFQ9Y675 71 aa7.86□□□□□ -1.15
PTPRB-205ENST00000547715 C9orf92A6NGG3 77 aa7.85□□□□□ -1.15
PTPRB-205ENST00000547715 NDUFB1O75438 58 aa7.85□□□□□ -1.15
PTPRB-205ENST00000547715 IGLV6-57P01721 117 aa7.85□□□□□ -1.15
PTPRB-205ENST00000547715 FLGP20930 4061 aaPredicted RBP7.84□□□□□ -1.15
PTPRB-205ENST00000547715 COX6B2Q6YFQ2 88 aa7.84□□□□□ -1.15
PTPRB-205ENST00000547715 OCR1Q9BZK8 76 aa7.83□□□□□ -1.16
PTPRB-205ENST00000547715 CD164Q04900 197 aa7.82□□□□□ -1.16
PTPRB-205ENST00000547715 CYP4F30PQ9H0H9 118 aa7.81□□□□□ -1.16
PTPRB-205ENST00000547715 hDV103S1A0JD37 113 aa7.79□□□□□ -1.16
PTPRB-205ENST00000547715 Q6ZQY7 126 aa7.78□□□□□ -1.16
PTPRB-205ENST00000547715 Q9BRP9 147 aa7.78□□□□□ -1.16
PTPRB-205ENST00000547715 USH2AO75445 5202 aa7.77□□□□□ -1.17
PTPRB-205ENST00000547715 ELOF1P60002 83 aaKnown RBP7.77□□□□□ -1.17
PTPRB-205ENST00000547715 Q6ZRX8 168 aa7.76□□□□□ -1.17
PTPRB-205ENST00000547715 LIMD2Q9BT23 127 aa7.76□□□□□ -1.17
PTPRB-205ENST00000547715 SSPOA2VEC9 5147 aa7.75□□□□□ -1.17
PTPRB-205ENST00000547715 IGKV4-1P06312 121 aa7.75□□□□□ -1.17
PTPRB-205ENST00000547715 H3BPC8 53 aa7.74□□□□□ -1.17
PTPRB-205ENST00000547715 ZNF73O43830 326 aaPredicted RBP7.73□□□□□ -1.17
PTPRB-205ENST00000547715 MPLKIPQ8TAP9 179 aa7.73□□□□□ -1.17
PTPRB-205ENST00000547715 NDUFS5O43920 106 aa7.7□□□□□ -1.18
PTPRB-205ENST00000547715 ST20-AS1Q8NBB2 130 aa7.69□□□□□ -1.18
PTPRB-205ENST00000547715 ZCCHC13Q8WW36 166 aaKnown RBP7.69□□□□□ -1.18
PTPRB-205ENST00000547715 RPL37P61927 97 aaKnown RBP7.68□□□□□ -1.18
PTPRB-205ENST00000547715 SPANXA2-OT1Q8N9U9 137 aa7.68□□□□□ -1.18
PTPRB-205ENST00000547715 FCGBPQ9Y6R7 5405 aaPredicted RBP7.68□□□□□ -1.18
PTPRB-205ENST00000547715 IGLV5-48A0A075B6I7 105 aa7.67□□□□□ -1.18
PTPRB-205ENST00000547715 H3BS24 57 aa7.67□□□□□ -1.18
PTPRB-205ENST00000547715 DHRS4-AS1Q9P1J3 65 aa7.65□□□□□ -1.18
PTPRB-205ENST00000547715 MP68P56378 58 aa7.64□□□□□ -1.19
PTPRB-205ENST00000547715 C1orf64Q8NEQ6 169 aa7.64□□□□□ -1.19
PTPRB-205ENST00000547715 HCG22E2RYF7 251 aa7.62□□□□□ -1.19
PTPRB-205ENST00000547715 ATP11AUNQ6ZP68 121 aa7.62□□□□□ -1.19
PTPRB-205ENST00000547715 SYNE2Q8WXH0 6885 aaKnown RBP7.61□□□□□ -1.19
PTPRB-205ENST00000547715 TRAV22A0A0B4J277 110 aa7.61□□□□□ -1.19
PTPRB-205ENST00000547715 KTN1-AS1Q86SY8 53 aa7.61□□□□□ -1.19
PTPRB-205ENST00000547715 MACF1Q9UPN3 7388 aaKnown RBP7.61□□□□□ -1.19
PTPRB-205ENST00000547715 SPRR1BP22528 89 aa7.6□□□□□ -1.19
PTPRB-205ENST00000547715 KRTAP9-8Q9BYQ0 159 aa7.57□□□□□ -1.2
PTPRB-205ENST00000547715 SMIM29Q86T20 159 aa7.56□□□□□ -1.2
PTPRB-205ENST00000547715 Q75L30 129 aa7.53□□□□□ -1.2
PTPRB-205ENST00000547715 KRTAP19-1Q8IUB9 90 aa7.53□□□□□ -1.2
PTPRB-205ENST00000547715 LOC101927531A0A1B0GV80 90 aa7.52□□□□□ -1.21
PTPRB-205ENST00000547715 LINC00208Q96KT6 92 aa7.52□□□□□ -1.21
PTPRB-205ENST00000547715 DEFB105AQ8NG35 78 aa7.51□□□□□ -1.21
PTPRB-205ENST00000547715 Q5VV11 94 aa7.49□□□□□ -1.21
PTPRB-205ENST00000547715 Q8N9L7 120 aa7.49□□□□□ -1.21
PTPRB-205ENST00000547715 A0A0G2JQZ4 141 aa7.48□□□□□ -1.21
PTPRB-205ENST00000547715 PSPHP1O15172 72 aa7.48□□□□□ -1.21
PTPRB-205ENST00000547715 CHKB-CPT1BH3BT56 60 aa7.47□□□□□ -1.21
PTPRB-205ENST00000547715 Q8N9P0 234 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms