RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 TLN1Q9Y490 2541 aaKnown RBP1.36□□□□□ -2.19
HCFC2-203ENST00000547194 REV3LO60673 3130 aa1.36□□□□□ -2.19
HCFC2-203ENST00000547194 DEFB130BP0DP73 79 aa1.36□□□□□ -2.19
HCFC2-203ENST00000547194 DEFB130AP0DP74 79 aa1.36□□□□□ -2.19
HCFC2-203ENST00000547194 KRTAP12-1P59990 96 aa1.36□□□□□ -2.19
HCFC2-203ENST00000547194 H1FX-AS1Q4G0G2 97 aa1.36□□□□□ -2.19
HCFC2-203ENST00000547194 WDFY3Q8IZQ1 3526 aa1.36□□□□□ -2.19
HCFC2-203ENST00000547194 TLN2Q9Y4G6 2542 aa1.36□□□□□ -2.19
HCFC2-203ENST00000547194 FREM2Q5SZK8 3169 aa1.36□□□□□ -2.19
HCFC2-203ENST00000547194 APCP25054 2843 aa1.35□□□□□ -2.19
HCFC2-203ENST00000547194 WDFY4Q6ZS81 3184 aa1.35□□□□□ -2.19
HCFC2-203ENST00000547194 VCANP13611 3396 aa1.35□□□□□ -2.19
HCFC2-203ENST00000547194 CDH23Q9H251 3354 aa1.35□□□□□ -2.19
HCFC2-203ENST00000547194 CEP295Q9C0D2 2601 aa1.35□□□□□ -2.19
HCFC2-203ENST00000547194 DMXL2Q8TDJ6 3036 aa1.34□□□□□ -2.19
HCFC2-203ENST00000547194 LAMA3Q16787 3333 aa1.34□□□□□ -2.19
HCFC2-203ENST00000547194 DEFB136Q30KP8 78 aa1.34□□□□□ -2.19
HCFC2-203ENST00000547194 HRNRQ86YZ3 2850 aaPredicted RBP1.34□□□□□ -2.2
HCFC2-203ENST00000547194 SPEGQ15772 3267 aa1.34□□□□□ -2.2
HCFC2-203ENST00000547194 DMDP11532 3685 aa1.34□□□□□ -2.2
HCFC2-203ENST00000547194 TACC2O95359 2948 aa1.34□□□□□ -2.2
HCFC2-203ENST00000547194 FCGBPQ9Y6R7 5405 aaPredicted RBP1.33□□□□□ -2.2
HCFC2-203ENST00000547194 LRBAP50851 2863 aa1.33□□□□□ -2.2
HCFC2-203ENST00000547194 CRIPTQ9P021 101 aa1.33□□□□□ -2.2
HCFC2-203ENST00000547194 OTOGQ6ZRI0 2925 aa1.33□□□□□ -2.2
HCFC2-203ENST00000547194 RIF1Q5UIP0 2472 aaKnown RBP1.33□□□□□ -2.2
HCFC2-203ENST00000547194 UBR5O95071 2799 aaPredicted RBP1.33□□□□□ -2.2
HCFC2-203ENST00000547194 ASH1LQ9NR48 2969 aaKnown RBP1.32□□□□□ -2.2
HCFC2-203ENST00000547194 DMXL1Q9Y485 3027 aa1.32□□□□□ -2.2
HCFC2-203ENST00000547194 BOD1L1Q8NFC6 3051 aa1.32□□□□□ -2.2
HCFC2-203ENST00000547194 F8P00451 2351 aa1.32□□□□□ -2.2
HCFC2-203ENST00000547194 J3QKU1 62 aa1.32□□□□□ -2.2
HCFC2-203ENST00000547194 KRTAP12-4P60329 112 aa1.32□□□□□ -2.2
HCFC2-203ENST00000547194 RPS29P62273 56 aaKnown RBP1.32□□□□□ -2.2
HCFC2-203ENST00000547194 PRLHP81277 87 aa1.32□□□□□ -2.2
HCFC2-203ENST00000547194 KRTAP6-3Q3LI67 103 aa1.32□□□□□ -2.2
HCFC2-203ENST00000547194 ZFHX4Q86UP3 3567 aa1.32□□□□□ -2.2
HCFC2-203ENST00000547194 CSMD1Q96PZ7 3565 aa1.32□□□□□ -2.2
HCFC2-203ENST00000547194 DCHS2Q6V1P9 2916 aa1.31□□□□□ -2.2
HCFC2-203ENST00000547194 A0A096LNI7 61 aa1.31□□□□□ -2.2
HCFC2-203ENST00000547194 DEFB123Q8N688 67 aa1.31□□□□□ -2.2
HCFC2-203ENST00000547194 FLG2Q5D862 2391 aaPredicted RBP1.31□□□□□ -2.2
HCFC2-203ENST00000547194 DOPEY1Q5JWR5 2465 aa1.31□□□□□ -2.2
HCFC2-203ENST00000547194 NAV2Q8IVL1 2488 aa1.31□□□□□ -2.2
HCFC2-203ENST00000547194 FBN1P35555 2871 aaKnown RBP1.31□□□□□ -2.2
HCFC2-203ENST00000547194 PRRC2CQ9Y520 2896 aaKnown RBP1.31□□□□□ -2.2
HCFC2-203ENST00000547194 ZFYVE26Q68DK2 2539 aa1.31□□□□□ -2.2
HCFC2-203ENST00000547194 CHD6Q8TD26 2715 aa1.31□□□□□ -2.2
HCFC2-203ENST00000547194 SONP18583 2426 aaKnown RBP1.3□□□□□ -2.2
HCFC2-203ENST00000547194 MUC6Q6W4X9 2439 aa1.3□□□□□ -2.2
HCFC2-203ENST00000547194 KRTAP12-3P60328 96 aa1.3□□□□□ -2.2
HCFC2-203ENST00000547194 CELSR3Q9NYQ7 3312 aa1.3□□□□□ -2.2
HCFC2-203ENST00000547194 ADGRG4Q8IZF6 3080 aa1.3□□□□□ -2.2
HCFC2-203ENST00000547194 MYO9AB2RTY4 2548 aa1.29□□□□□ -2.2
HCFC2-203ENST00000547194 JMJD1CQ15652 2540 aa1.29□□□□□ -2.2
HCFC2-203ENST00000547194 MYO15AQ9UKN7 3530 aa1.29□□□□□ -2.2
HCFC2-203ENST00000547194 SPENQ96T58 3664 aaKnown RBP1.29□□□□□ -2.2
HCFC2-203ENST00000547194 SETXQ7Z333 2677 aaKnown RBP1.28□□□□□ -2.2
HCFC2-203ENST00000547194 ATMQ13315 3056 aa1.28□□□□□ -2.2
HCFC2-203ENST00000547194 DEFB135Q30KP9 77 aa1.28□□□□□ -2.2
HCFC2-203ENST00000547194 ANKRD11Q6UB99 2663 aaPredicted RBP1.28□□□□□ -2.2
HCFC2-203ENST00000547194 COL12A1Q99715 3063 aa1.27□□□□□ -2.21
HCFC2-203ENST00000547194 PIEZO1Q92508 2521 aa1.27□□□□□ -2.21
HCFC2-203ENST00000547194 LOC400499M0QZD8 3231 aa1.27□□□□□ -2.21
HCFC2-203ENST00000547194 CELSR1Q9NYQ6 3014 aa1.27□□□□□ -2.21
HCFC2-203ENST00000547194 UTP20O75691 2785 aaKnown RBP1.27□□□□□ -2.21
HCFC2-203ENST00000547194 SMG1Q96Q15 3661 aaKnown RBP1.26□□□□□ -2.21
HCFC2-203ENST00000547194 M0QZ58 72 aa1.26□□□□□ -2.21
HCFC2-203ENST00000547194 CENPEQ02224 2701 aa1.26□□□□□ -2.21
HCFC2-203ENST00000547194 USP9XQ93008 2570 aaPredicted RBP1.25□□□□□ -2.21
HCFC2-203ENST00000547194 ZNF462Q96JM2 2506 aa1.25□□□□□ -2.21
HCFC2-203ENST00000547194 TTC28Q96AY4 2481 aa1.25□□□□□ -2.21
HCFC2-203ENST00000547194 BSNQ9UPA5 3926 aa1.25□□□□□ -2.21
HCFC2-203ENST00000547194 S4R3F8 94 aa1.25□□□□□ -2.21
HCFC2-203ENST00000547194 MTORP42345 2549 aa1.24□□□□□ -2.21
HCFC2-203ENST00000547194 CCDC168Q8NDH2 2452 aa1.24□□□□□ -2.21
HCFC2-203ENST00000547194 SPINK1P00995 79 aa1.24□□□□□ -2.21
HCFC2-203ENST00000547194 COL6A5A8TX70 2615 aa1.24□□□□□ -2.21
HCFC2-203ENST00000547194 USP9YO00507 2555 aaPredicted RBP1.24□□□□□ -2.21
HCFC2-203ENST00000547194 MEGF8Q7Z7M0 2845 aa1.24□□□□□ -2.21
HCFC2-203ENST00000547194 MXRA5Q9NR99 2828 aa1.24□□□□□ -2.21
HCFC2-203ENST00000547194 PKD1L2Q7Z442 2459 aa1.24□□□□□ -2.21
HCFC2-203ENST00000547194 LRRK2Q5S007 2527 aa1.23□□□□□ -2.21
HCFC2-203ENST00000547194 TEX15Q9BXT5 2789 aa1.23□□□□□ -2.21
HCFC2-203ENST00000547194 VPS13DQ5THJ4 4388 aa1.23□□□□□ -2.21
HCFC2-203ENST00000547194 CHD8Q9HCK8 2581 aa1.23□□□□□ -2.21
HCFC2-203ENST00000547194 AKAP9Q99996 3911 aa1.23□□□□□ -2.21
HCFC2-203ENST00000547194 NF1P21359 2839 aa1.23□□□□□ -2.21
HCFC2-203ENST00000547194 ANK3Q12955 4377 aaKnown RBP1.23□□□□□ -2.21
HCFC2-203ENST00000547194 FAM208BQ5VWN6 2430 aa1.23□□□□□ -2.21
HCFC2-203ENST00000547194 UNC79Q9P2D8 2635 aa1.22□□□□□ -2.21
HCFC2-203ENST00000547194 DEFB4AO15263 64 aa1.22□□□□□ -2.21
HCFC2-203ENST00000547194 HTN3P15516 51 aa1.22□□□□□ -2.21
HCFC2-203ENST00000547194 ACANP16112 2415 aa1.22□□□□□ -2.21
HCFC2-203ENST00000547194 VWFP04275 2813 aa1.22□□□□□ -2.21
HCFC2-203ENST00000547194 LAMA5O15230 3695 aa1.22□□□□□ -2.21
HCFC2-203ENST00000547194 ASPMQ8IZT6 3477 aa1.21□□□□□ -2.22
HCFC2-203ENST00000547194 TENM4Q6N022 2769 aa1.21□□□□□ -2.22
HCFC2-203ENST00000547194 CRYBG3Q68DQ2 2970 aa1.21□□□□□ -2.22
HCFC2-203ENST00000547194 RELNP78509 3460 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms