RNA–Protein interactions for RNA: ENST00000546561.2

TSPAN8-203, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,168 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-203ENST00000546561 LIMD2Q9BT23 127 aa4.59□□□□□ -1.67
TSPAN8-203ENST00000546561 CXCL6P80162 114 aa4.58□□□□□ -1.68
TSPAN8-203ENST00000546561 HRCT1Q6UXD1 115 aa4.58□□□□□ -1.68
TSPAN8-203ENST00000546561 EPPK1P58107 5090 aaKnown RBP4.57□□□□□ -1.68
TSPAN8-203ENST00000546561 BPY2O14599 106 aa4.57□□□□□ -1.68
TSPAN8-203ENST00000546561 SPAG11AQ6PDA7 123 aa4.57□□□□□ -1.68
TSPAN8-203ENST00000546561 PRR26Q8N8Z3 221 aa4.57□□□□□ -1.68
TSPAN8-203ENST00000546561 SVIPQ8NHG7 77 aa4.57□□□□□ -1.68
TSPAN8-203ENST00000546561 IMUPQ9GZP8 106 aa4.57□□□□□ -1.68
TSPAN8-203ENST00000546561 J3KT08 172 aa4.56□□□□□ -1.68
TSPAN8-203ENST00000546561 SPINK1P00995 79 aa4.56□□□□□ -1.68
TSPAN8-203ENST00000546561 MT-ATP8P03928 68 aa4.56□□□□□ -1.68
TSPAN8-203ENST00000546561 LINC00304Q8N9R0 145 aa4.56□□□□□ -1.68
TSPAN8-203ENST00000546561 IGKV3D-7A0A0C4DH55 119 aa4.55□□□□□ -1.68
TSPAN8-203ENST00000546561 RPS29P62273 56 aaKnown RBP4.55□□□□□ -1.68
TSPAN8-203ENST00000546561 ASB16-AS1Q495Z4 193 aa4.54□□□□□ -1.68
TSPAN8-203ENST00000546561 Q5XG85 94 aa4.54□□□□□ -1.68
TSPAN8-203ENST00000546561 HIST1H4AP62805 103 aaKnown RBP4.53□□□□□ -1.68
TSPAN8-203ENST00000546561 NDUFB1O75438 58 aa4.52□□□□□ -1.69
TSPAN8-203ENST00000546561 LINC00472Q9H8W2 130 aa4.52□□□□□ -1.69
TSPAN8-203ENST00000546561 KIAA1109Q2LD37 5005 aa4.51□□□□□ -1.69
TSPAN8-203ENST00000546561 IGKV4-1P06312 121 aa4.51□□□□□ -1.69
TSPAN8-203ENST00000546561 A8MWP4 228 aa4.5□□□□□ -1.69
TSPAN8-203ENST00000546561 OXTP01178 125 aa4.5□□□□□ -1.69
TSPAN8-203ENST00000546561 SCGB1A1P11684 91 aa4.5□□□□□ -1.69
TSPAN8-203ENST00000546561 BIRC6Q9NR09 4857 aa4.49□□□□□ -1.69
TSPAN8-203ENST00000546561 DEFB116Q30KQ4 102 aa4.49□□□□□ -1.69
TSPAN8-203ENST00000546561 Q96NJ1 140 aa4.49□□□□□ -1.69
TSPAN8-203ENST00000546561 K7EQZ3 153 aa4.48□□□□□ -1.69
TSPAN8-203ENST00000546561 DSCR10P59022 87 aa4.48□□□□□ -1.69
TSPAN8-203ENST00000546561 FAT3Q8TDW7 4589 aa4.47□□□□□ -1.69
TSPAN8-203ENST00000546561 FAM236AA0A1B0GUQ0 79 aa4.47□□□□□ -1.69
TSPAN8-203ENST00000546561 FAM236BA0A1B0GV22 79 aa4.47□□□□□ -1.69
TSPAN8-203ENST00000546561 KRTAP10-8P60410 259 aa4.47□□□□□ -1.69
TSPAN8-203ENST00000546561 A0A087WVE0 104 aa4.46□□□□□ -1.7
TSPAN8-203ENST00000546561 PRR15Q8IV56 129 aa4.46□□□□□ -1.7
TSPAN8-203ENST00000546561 Q8N9L7 120 aa4.46□□□□□ -1.7
TSPAN8-203ENST00000546561 A0A1B0GVX0 72 aa4.45□□□□□ -1.7
TSPAN8-203ENST00000546561 HCG22E2RYF7 251 aa4.45□□□□□ -1.7
TSPAN8-203ENST00000546561 C1orf195Q5TG92 126 aa4.45□□□□□ -1.7
TSPAN8-203ENST00000546561 TNXBP22105 4242 aa4.45□□□□□ -1.7
TSPAN8-203ENST00000546561 IGHV6-1A0A0B4J1U7 121 aa4.44□□□□□ -1.7
TSPAN8-203ENST00000546561 C8orf87E5RJ46 101 aa4.44□□□□□ -1.7
TSPAN8-203ENST00000546561 ATOX1O00244 68 aa4.44□□□□□ -1.7
TSPAN8-203ENST00000546561 SMIM20Q8N5G0 67 aa4.43□□□□□ -1.7
TSPAN8-203ENST00000546561 CASC2Q6XLA1 102 aa4.42□□□□□ -1.7
TSPAN8-203ENST00000546561 C8orf17Q9NRJ1 99 aa4.42□□□□□ -1.7
TSPAN8-203ENST00000546561 LRP1Q07954 4544 aaKnown RBP4.42□□□□□ -1.7
TSPAN8-203ENST00000546561 HERC2O95714 4834 aa4.42□□□□□ -1.7
TSPAN8-203ENST00000546561 FP248Q71RG6 208 aaPredicted RBP4.41□□□□□ -1.7
TSPAN8-203ENST00000546561 WFDC13Q8IUB5 93 aa4.41□□□□□ -1.7
TSPAN8-203ENST00000546561 FLG2Q5D862 2391 aaPredicted RBP4.41□□□□□ -1.7
TSPAN8-203ENST00000546561 MMP24-AS1A0A0U1RRL7 71 aa4.4□□□□□ -1.71
TSPAN8-203ENST00000546561 hDV103S1A0JD37 113 aa4.4□□□□□ -1.71
TSPAN8-203ENST00000546561 MT1HL1P0DM35 61 aa4.4□□□□□ -1.71
TSPAN8-203ENST00000546561 LINC00313P59037 77 aa4.4□□□□□ -1.71
TSPAN8-203ENST00000546561 TMEM254Q8TBM7 123 aa4.4□□□□□ -1.71
TSPAN8-203ENST00000546561 ANAPC13Q9BS18 74 aa4.4□□□□□ -1.71
TSPAN8-203ENST00000546561 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
TSPAN8-203ENST00000546561 MYCBP2O75592 4640 aa4.39□□□□□ -1.71
TSPAN8-203ENST00000546561 MRPL34Q9BQ48 92 aaKnown RBP4.38□□□□□ -1.71
TSPAN8-203ENST00000546561 RETNLBQ9BQ08 111 aa4.37□□□□□ -1.71
TSPAN8-203ENST00000546561 TRAV7A0A075B6U4 112 aa4.36□□□□□ -1.71
TSPAN8-203ENST00000546561 NDUFS5O43920 106 aa4.36□□□□□ -1.71
TSPAN8-203ENST00000546561 SERP2Q8N6R1 65 aa4.36□□□□□ -1.71
TSPAN8-203ENST00000546561 TP53AIP1Q9HCN2 124 aa4.36□□□□□ -1.71
TSPAN8-203ENST00000546561 UQCRQO14949 82 aa4.34□□□□□ -1.71
TSPAN8-203ENST00000546561 OCR1Q9BZK8 76 aa4.34□□□□□ -1.71
TSPAN8-203ENST00000546561 IGLV7-46A0A075B6I9 117 aa4.33□□□□□ -1.72
TSPAN8-203ENST00000546561 COX7CP15954 63 aa4.33□□□□□ -1.72
TSPAN8-203ENST00000546561 NOTCH2NLQ7Z3S9 236 aa4.33□□□□□ -1.72
TSPAN8-203ENST00000546561 DMBT1Q9UGM3 2413 aaPredicted RBP4.33□□□□□ -1.72
TSPAN8-203ENST00000546561 ABCA13Q86UQ4 5058 aa4.32□□□□□ -1.72
TSPAN8-203ENST00000546561 PRR4Q16378 134 aa4.32□□□□□ -1.72
TSPAN8-203ENST00000546561 C9orf92A6NGG3 77 aa4.31□□□□□ -1.72
TSPAN8-203ENST00000546561 MP68P56378 58 aa4.31□□□□□ -1.72
TSPAN8-203ENST00000546561 C5orf47Q569G3 176 aa4.31□□□□□ -1.72
TSPAN8-203ENST00000546561 Q8N9P0 234 aaPredicted RBP4.31□□□□□ -1.72
TSPAN8-203ENST00000546561 TRAV22A0A0B4J277 110 aa4.3□□□□□ -1.72
TSPAN8-203ENST00000546561 KRTAP16-1A8MUX0 517 aa4.3□□□□□ -1.72
TSPAN8-203ENST00000546561 H3BPC8 53 aa4.29□□□□□ -1.72
TSPAN8-203ENST00000546561 H0Y9P7 68 aa4.28□□□□□ -1.72
TSPAN8-203ENST00000546561 TPRXLQ17RH7 258 aa4.28□□□□□ -1.72
TSPAN8-203ENST00000546561 KRTAP13-3Q3SY46 172 aa4.27□□□□□ -1.73
TSPAN8-203ENST00000546561 C20orf166-AS1Q96NR2 134 aa4.27□□□□□ -1.73
TSPAN8-203ENST00000546561 A8MUU9 505 aa4.26□□□□□ -1.73
TSPAN8-203ENST00000546561 Q75L30 129 aa4.26□□□□□ -1.73
TSPAN8-203ENST00000546561 C20orf197Q8N268 126 aa4.26□□□□□ -1.73
TSPAN8-203ENST00000546561 CCDC179H3BU77 68 aa4.25□□□□□ -1.73
TSPAN8-203ENST00000546561 KLKP1Q107X0 134 aa4.25□□□□□ -1.73
TSPAN8-203ENST00000546561 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
TSPAN8-203ENST00000546561 LOC101927531A0A1B0GV80 90 aa4.24□□□□□ -1.73
TSPAN8-203ENST00000546561 NDUFC1O43677 76 aa4.24□□□□□ -1.73
TSPAN8-203ENST00000546561 IGKV2-30P06310 120 aa4.24□□□□□ -1.73
TSPAN8-203ENST00000546561 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
TSPAN8-203ENST00000546561 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
TSPAN8-203ENST00000546561 ZCCHC13Q8WW36 166 aaKnown RBP4.24□□□□□ -1.73
TSPAN8-203ENST00000546561 A0A0U1RQV1 116 aa4.23□□□□□ -1.73
TSPAN8-203ENST00000546561 ATP11AUNQ6ZP68 121 aa4.23□□□□□ -1.73
TSPAN8-203ENST00000546561 LINC00208Q96KT6 92 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms