RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 A0A087WSZ3 146 aa9.13□□□□□ -0.95
LIMS2-217ENST00000545738 CCKP06307 115 aa9.13□□□□□ -0.95
LIMS2-217ENST00000545738 SERP1Q9Y6X1 66 aa9.13□□□□□ -0.95
LIMS2-217ENST00000545738 C1orf195Q5TG92 126 aa9.12□□□□□ -0.95
LIMS2-217ENST00000545738 DSCR8Q96T75 97 aa9.12□□□□□ -0.95
LIMS2-217ENST00000545738 JMJD7-PLA2G4BH0Y9G9 81 aa9.11□□□□□ -0.95
LIMS2-217ENST00000545738 Q6ZQT0 140 aa9.11□□□□□ -0.95
LIMS2-217ENST00000545738 LOC110117498A0A087WWA1 95 aa9.09□□□□□ -0.95
LIMS2-217ENST00000545738 IGLV7-46A0A075B6I9 117 aa9.08□□□□□ -0.96
LIMS2-217ENST00000545738 ASB16-AS1Q495Z4 193 aa9.08□□□□□ -0.96
LIMS2-217ENST00000545738 FP248Q71RG6 208 aaPredicted RBP9.07□□□□□ -0.96
LIMS2-217ENST00000545738 Q96NJ1 140 aa9.07□□□□□ -0.96
LIMS2-217ENST00000545738 SMIM26A0A096LP01 95 aa9.06□□□□□ -0.96
LIMS2-217ENST00000545738 FAM236DA0A1B0GTK5 79 aa9.05□□□□□ -0.96
LIMS2-217ENST00000545738 FAM236CP0DP71 79 aa9.05□□□□□ -0.96
LIMS2-217ENST00000545738 ATP5EP56381 51 aaPredicted RBP9.03□□□□□ -0.96
LIMS2-217ENST00000545738 KRTAP13-3Q3SY46 172 aa9.02□□□□□ -0.96
LIMS2-217ENST00000545738 ATP5EP2Q5VTU8 51 aa9.02□□□□□ -0.96
LIMS2-217ENST00000545738 TPRXLQ17RH7 258 aa9.02□□□□□ -0.97
LIMS2-217ENST00000545738 PDE6GP18545 87 aa9□□□□□ -0.97
LIMS2-217ENST00000545738 DEFB116Q30KQ4 102 aa8.98□□□□□ -0.97
LIMS2-217ENST00000545738 LINC00472Q9H8W2 130 aa8.98□□□□□ -0.97
LIMS2-217ENST00000545738 CYSTM1Q9H1C7 97 aa8.97□□□□□ -0.97
LIMS2-217ENST00000545738 RNF213Q63HN8 5207 aa8.95□□□□□ -0.98
LIMS2-217ENST00000545738 C9orf92A6NGG3 77 aa8.94□□□□□ -0.98
LIMS2-217ENST00000545738 NDUFC1O43677 76 aa8.94□□□□□ -0.98
LIMS2-217ENST00000545738 MUC2Q02817 5179 aa8.92□□□□□ -0.98
LIMS2-217ENST00000545738 MUC17Q685J3 4493 aa8.92□□□□□ -0.98
LIMS2-217ENST00000545738 A0A1B0GW54 56 aa8.91□□□□□ -0.98
LIMS2-217ENST00000545738 IGKV4-1P06312 121 aa8.9□□□□□ -0.98
LIMS2-217ENST00000545738 XP32Q5T750 250 aa8.9□□□□□ -0.98
LIMS2-217ENST00000545738 KLKP1Q107X0 134 aa8.88□□□□□ -0.99
LIMS2-217ENST00000545738 TRAV7A0A075B6U4 112 aa8.87□□□□□ -0.99
LIMS2-217ENST00000545738 BRK1Q8WUW1 75 aa8.86□□□□□ -0.99
LIMS2-217ENST00000545738 LINC00846Q9NV44 126 aa8.86□□□□□ -0.99
LIMS2-217ENST00000545738 NOTCH2NLQ7Z3S9 236 aa8.85□□□□□ -0.99
LIMS2-217ENST00000545738 H7BZZ5 65 aa8.85□□□□□ -0.99
LIMS2-217ENST00000545738 NREPQ16612 68 aa8.83□□□□□ -1
LIMS2-217ENST00000545738 Q6ZVQ6 151 aa8.83□□□□□ -1
LIMS2-217ENST00000545738 IGKV3D-7A0A0C4DH55 119 aa8.83□□□□□ -1
LIMS2-217ENST00000545738 PMAIP1Q13794 54 aa8.83□□□□□ -1
LIMS2-217ENST00000545738 C20orf197Q8N268 126 aa8.83□□□□□ -1
LIMS2-217ENST00000545738 DSCR10P59022 87 aa8.82□□□□□ -1
LIMS2-217ENST00000545738 PRR15Q8IV56 129 aa8.82□□□□□ -1
LIMS2-217ENST00000545738 IGHV6-1A0A0B4J1U7 121 aa8.79□□□□□ -1
LIMS2-217ENST00000545738 A0A1B0GVX0 72 aa8.78□□□□□ -1
LIMS2-217ENST00000545738 A0A087WVE0 104 aa8.77□□□□□ -1
LIMS2-217ENST00000545738 KRTAP16-1A8MUX0 517 aa8.77□□□□□ -1
LIMS2-217ENST00000545738 A8MWP4 228 aa8.76□□□□□ -1.01
LIMS2-217ENST00000545738 A0A0U1RQV1 116 aa8.75□□□□□ -1.01
LIMS2-217ENST00000545738 K7EQZ3 153 aa8.74□□□□□ -1.01
LIMS2-217ENST00000545738 LINC00313P59037 77 aa8.74□□□□□ -1.01
LIMS2-217ENST00000545738 Q8N9L7 120 aa8.73□□□□□ -1.01
LIMS2-217ENST00000545738 UBL5Q9BZL1 73 aa8.73□□□□□ -1.01
LIMS2-217ENST00000545738 BPY2O14599 106 aa8.72□□□□□ -1.01
LIMS2-217ENST00000545738 RPL37P61927 97 aaKnown RBP8.72□□□□□ -1.01
LIMS2-217ENST00000545738 KRTAP4-1Q9BYQ7 146 aa8.71□□□□□ -1.01
LIMS2-217ENST00000545738 C20orf166-AS1Q96NR2 134 aa8.7□□□□□ -1.02
LIMS2-217ENST00000545738 A8MUU9 505 aa8.68□□□□□ -1.02
LIMS2-217ENST00000545738 PCOTHQ58A44 107 aa8.68□□□□□ -1.02
LIMS2-217ENST00000545738 Q75L30 129 aa8.68□□□□□ -1.02
LIMS2-217ENST00000545738 NDUFB1O75438 58 aa8.68□□□□□ -1.02
LIMS2-217ENST00000545738 C8orf17Q9NRJ1 99 aa8.68□□□□□ -1.02
LIMS2-217ENST00000545738 C8orf87E5RJ46 101 aa8.67□□□□□ -1.02
LIMS2-217ENST00000545738 MMP24-AS1A0A0U1RRL7 71 aa8.66□□□□□ -1.02
LIMS2-217ENST00000545738 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
LIMS2-217ENST00000545738 CXCL6P80162 114 aa8.63□□□□□ -1.03
LIMS2-217ENST00000545738 Q1T7F1 81 aa8.59□□□□□ -1.03
LIMS2-217ENST00000545738 Q8N9P0 234 aaPredicted RBP8.59□□□□□ -1.03
LIMS2-217ENST00000545738 hDV103S1A0JD37 113 aa8.56□□□□□ -1.04
LIMS2-217ENST00000545738 WFDC13Q8IUB5 93 aa8.56□□□□□ -1.04
LIMS2-217ENST00000545738 FAT4Q6V0I7 4981 aa8.56□□□□□ -1.04
LIMS2-217ENST00000545738 SNURFQ9Y675 71 aa8.55□□□□□ -1.04
LIMS2-217ENST00000545738 ATP11AUNQ6ZP68 121 aa8.54□□□□□ -1.04
LIMS2-217ENST00000545738 MPLKIPQ8TAP9 179 aa8.54□□□□□ -1.04
LIMS2-217ENST00000545738 TMEM254Q8TBM7 123 aa8.54□□□□□ -1.04
LIMS2-217ENST00000545738 MRPL34Q9BQ48 92 aaKnown RBP8.54□□□□□ -1.04
LIMS2-217ENST00000545738 CASC2Q6XLA1 102 aa8.51□□□□□ -1.05
LIMS2-217ENST00000545738 HCG22E2RYF7 251 aa8.51□□□□□ -1.05
LIMS2-217ENST00000545738 NDUFS5O43920 106 aa8.5□□□□□ -1.05
LIMS2-217ENST00000545738 KTN1-AS1Q86SY8 53 aa8.5□□□□□ -1.05
LIMS2-217ENST00000545738 ZCCHC13Q8WW36 166 aaKnown RBP8.47□□□□□ -1.05
LIMS2-217ENST00000545738 KRTAP19-2Q3LHN2 52 aa8.46□□□□□ -1.06
LIMS2-217ENST00000545738 Q5W150 140 aa8.43□□□□□ -1.06
LIMS2-217ENST00000545738 RBM12B-AS1Q9P1G2 102 aa8.4□□□□□ -1.06
LIMS2-217ENST00000545738 LCE2CQ5TA81 110 aa8.38□□□□□ -1.07
LIMS2-217ENST00000545738 OCR1Q9BZK8 76 aa8.37□□□□□ -1.07
LIMS2-217ENST00000545738 CYP4F30PQ9H0H9 118 aa8.36□□□□□ -1.07
LIMS2-217ENST00000545738 FLGP20930 4061 aaPredicted RBP8.34□□□□□ -1.07
LIMS2-217ENST00000545738 TRAV22A0A0B4J277 110 aa8.33□□□□□ -1.08
LIMS2-217ENST00000545738 HRES1P13985 223 aa8.33□□□□□ -1.08
LIMS2-217ENST00000545738 SPINK7P58062 85 aa8.33□□□□□ -1.08
LIMS2-217ENST00000545738 C1orf64Q8NEQ6 169 aa8.29□□□□□ -1.08
LIMS2-217ENST00000545738 LCE2AQ5TA79 106 aaPredicted RBP8.26□□□□□ -1.09
LIMS2-217ENST00000545738 C7orf65Q6ZTY9 151 aa8.26□□□□□ -1.09
LIMS2-217ENST00000545738 TP53AIP1Q9HCN2 124 aa8.26□□□□□ -1.09
LIMS2-217ENST00000545738 IGKV2D-30A0A075B6S6 120 aa8.24□□□□□ -1.09
LIMS2-217ENST00000545738 PSPHP1O15172 72 aa8.24□□□□□ -1.09
LIMS2-217ENST00000545738 IGKV2-30P06310 120 aa8.24□□□□□ -1.09
LIMS2-217ENST00000545738 LCA10Q71F78 164 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms