RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 MUC17Q685J3 4493 aa4□□□□□ -1.77
CPSF7-224ENST00000544990 M0R143 59 aa4□□□□□ -1.77
CPSF7-224ENST00000544990 NOTCH2NLQ7Z3S9 236 aa4□□□□□ -1.77
CPSF7-224ENST00000544990 TRACP01848 142 aa3.99□□□□□ -1.77
CPSF7-224ENST00000544990 ANKRD29Q8N6D5 301 aa3.99□□□□□ -1.77
CPSF7-224ENST00000544990 A0A087WSZ3 146 aa3.98□□□□□ -1.77
CPSF7-224ENST00000544990 MT3P25713 68 aa3.98□□□□□ -1.77
CPSF7-224ENST00000544990 PCOTHQ58A44 107 aa3.98□□□□□ -1.77
CPSF7-224ENST00000544990 TSTD3H0UI37 97 aa3.97□□□□□ -1.77
CPSF7-224ENST00000544990 RPL37P61927 97 aaKnown RBP3.97□□□□□ -1.77
CPSF7-224ENST00000544990 KRTAP4-1Q9BYQ7 146 aa3.97□□□□□ -1.77
CPSF7-224ENST00000544990 TRBV7-4A0A0J9YYF1 115 aa3.96□□□□□ -1.78
CPSF7-224ENST00000544990 A0A1B0GV72 72 aa3.96□□□□□ -1.78
CPSF7-224ENST00000544990 A0A1W2PNM2 257 aa3.96□□□□□ -1.78
CPSF7-224ENST00000544990 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
CPSF7-224ENST00000544990 CCKP06307 115 aa3.95□□□□□ -1.78
CPSF7-224ENST00000544990 BAALC-AS2P0C853 105 aa3.95□□□□□ -1.78
CPSF7-224ENST00000544990 RBM3P98179 157 aaKnown RBP3.95□□□□□ -1.78
CPSF7-224ENST00000544990 OBSCN-AS1Q96MR7 158 aa3.95□□□□□ -1.78
CPSF7-224ENST00000544990 ATXN8Q156A1 80 aa3.94□□□□□ -1.78
CPSF7-224ENST00000544990 LYRM7Q5U5X0 104 aa3.94□□□□□ -1.78
CPSF7-224ENST00000544990 DSCR8Q96T75 97 aa3.94□□□□□ -1.78
CPSF7-224ENST00000544990 ATP11AUNQ6ZP68 121 aa3.93□□□□□ -1.78
CPSF7-224ENST00000544990 Q96NJ1 140 aa3.93□□□□□ -1.78
CPSF7-224ENST00000544990 C9JAW5 83 aa3.92□□□□□ -1.78
CPSF7-224ENST00000544990 IGKV4-1P06312 121 aa3.92□□□□□ -1.78
CPSF7-224ENST00000544990 BATFQ16520 125 aa3.92□□□□□ -1.78
CPSF7-224ENST00000544990 SIGMAR1Q99720 223 aa3.92□□□□□ -1.78
CPSF7-224ENST00000544990 NAA38Q9BRA0 125 aaKnown RBP3.92□□□□□ -1.78
CPSF7-224ENST00000544990 VPS25Q9BRG1 176 aa3.92□□□□□ -1.78
CPSF7-224ENST00000544990 TRBV20-1A0A075B6N2 111 aa3.91□□□□□ -1.78
CPSF7-224ENST00000544990 JMJD7-PLA2G4BH0Y9G9 81 aa3.91□□□□□ -1.78
CPSF7-224ENST00000544990 A0A1B0GV90 55 aa3.9□□□□□ -1.79
CPSF7-224ENST00000544990 LINC00313P59037 77 aa3.9□□□□□ -1.79
CPSF7-224ENST00000544990 FAT4Q6V0I7 4981 aa3.89□□□□□ -1.79
CPSF7-224ENST00000544990 DSCR10P59022 87 aa3.89□□□□□ -1.79
CPSF7-224ENST00000544990 C20orf166-AS1Q96NR2 134 aa3.89□□□□□ -1.79
CPSF7-224ENST00000544990 LINC00472Q9H8W2 130 aa3.89□□□□□ -1.79
CPSF7-224ENST00000544990 A8MUU9 505 aa3.88□□□□□ -1.79
CPSF7-224ENST00000544990 PDE6GP18545 87 aa3.88□□□□□ -1.79
CPSF7-224ENST00000544990 DEFB116Q30KQ4 102 aa3.88□□□□□ -1.79
CPSF7-224ENST00000544990 A0A1B0GW54 56 aa3.87□□□□□ -1.79
CPSF7-224ENST00000544990 LOC110117498A0A087WWA1 95 aa3.86□□□□□ -1.79
CPSF7-224ENST00000544990 IGHV6-1A0A0B4J1U7 121 aa3.86□□□□□ -1.79
CPSF7-224ENST00000544990 J3KT08 172 aa3.86□□□□□ -1.79
CPSF7-224ENST00000544990 COX6B2Q6YFQ2 88 aa3.86□□□□□ -1.79
CPSF7-224ENST00000544990 Q6ZQT0 140 aa3.86□□□□□ -1.79
CPSF7-224ENST00000544990 C8orf87E5RJ46 101 aa3.85□□□□□ -1.79
CPSF7-224ENST00000544990 TAX1BP3O14907 124 aa3.85□□□□□ -1.79
CPSF7-224ENST00000544990 NDUFB1O75438 58 aa3.85□□□□□ -1.79
CPSF7-224ENST00000544990 KRTAP19-2Q3LHN2 52 aa3.85□□□□□ -1.79
CPSF7-224ENST00000544990 OCR1Q9BZK8 76 aa3.85□□□□□ -1.79
CPSF7-224ENST00000544990 C14orf132Q9NPU4 83 aa3.85□□□□□ -1.79
CPSF7-224ENST00000544990 A0A1B0GVX0 72 aa3.84□□□□□ -1.79
CPSF7-224ENST00000544990 A0A1W2PPM0 123 aa3.84□□□□□ -1.79
CPSF7-224ENST00000544990 H3BT86 120 aa3.84□□□□□ -1.79
CPSF7-224ENST00000544990 KRTAP16-1A8MUX0 517 aa3.83□□□□□ -1.8
CPSF7-224ENST00000544990 MT1HP80294 61 aa3.82□□□□□ -1.8
CPSF7-224ENST00000544990 NREPQ16612 68 aa3.82□□□□□ -1.8
CPSF7-224ENST00000544990 M0R2T5 61 aa3.81□□□□□ -1.8
CPSF7-224ENST00000544990 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
CPSF7-224ENST00000544990 A8MWP4 228 aa3.8□□□□□ -1.8
CPSF7-224ENST00000544990 COL5A1-AS1Q5SY13 56 aa3.8□□□□□ -1.8
CPSF7-224ENST00000544990 MTURNQ8N3F0 131 aa3.8□□□□□ -1.8
CPSF7-224ENST00000544990 SPCS1Q9Y6A9 102 aa3.8□□□□□ -1.8
CPSF7-224ENST00000544990 C8orf17Q9NRJ1 99 aa3.78□□□□□ -1.8
CPSF7-224ENST00000544990 IGKV3D-7A0A0C4DH55 119 aa3.77□□□□□ -1.81
CPSF7-224ENST00000544990 PRR15Q8IV56 129 aa3.76□□□□□ -1.81
CPSF7-224ENST00000544990 ZCCHC13Q8WW36 166 aaKnown RBP3.76□□□□□ -1.81
CPSF7-224ENST00000544990 RBM12B-AS1Q9P1G2 102 aa3.76□□□□□ -1.81
CPSF7-224ENST00000544990 FSIP2Q5CZC0 6907 aa3.76□□□□□ -1.81
CPSF7-224ENST00000544990 FAM236DA0A1B0GTK5 79 aa3.75□□□□□ -1.81
CPSF7-224ENST00000544990 FAM236CP0DP71 79 aa3.75□□□□□ -1.81
CPSF7-224ENST00000544990 KRTAP10-6P60371 365 aaPredicted RBP3.75□□□□□ -1.81
CPSF7-224ENST00000544990 K7EP34 96 aa3.74□□□□□ -1.81
CPSF7-224ENST00000544990 BPY2O14599 106 aa3.74□□□□□ -1.81
CPSF7-224ENST00000544990 GTF2H5Q6ZYL4 71 aa3.74□□□□□ -1.81
CPSF7-224ENST00000544990 TMEM254Q8TBM7 123 aa3.73□□□□□ -1.81
CPSF7-224ENST00000544990 MRPL34Q9BQ48 92 aaKnown RBP3.73□□□□□ -1.81
CPSF7-224ENST00000544990 MMP24-AS1A0A0U1RRL7 71 aa3.72□□□□□ -1.81
CPSF7-224ENST00000544990 hDV103S1A0JD37 113 aa3.72□□□□□ -1.81
CPSF7-224ENST00000544990 K7EQZ3 153 aa3.72□□□□□ -1.81
CPSF7-224ENST00000544990 HRES1P13985 223 aa3.72□□□□□ -1.81
CPSF7-224ENST00000544990 SPINK7P58062 85 aa3.72□□□□□ -1.81
CPSF7-224ENST00000544990 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
CPSF7-224ENST00000544990 UBL5Q9BZL1 73 aa3.71□□□□□ -1.82
CPSF7-224ENST00000544990 PRO0461Q9UI25 63 aa3.71□□□□□ -1.82
CPSF7-224ENST00000544990 F8W1H4 67 aa3.7□□□□□ -1.82
CPSF7-224ENST00000544990 NDUFS5O43920 106 aa3.7□□□□□ -1.82
CPSF7-224ENST00000544990 LINC00846Q9NV44 126 aa3.68□□□□□ -1.82
CPSF7-224ENST00000544990 FLGP20930 4061 aaPredicted RBP3.68□□□□□ -1.82
CPSF7-224ENST00000544990 CASC2Q6XLA1 102 aa3.67□□□□□ -1.82
CPSF7-224ENST00000544990 WFDC13Q8IUB5 93 aa3.67□□□□□ -1.82
CPSF7-224ENST00000544990 ETDBQ3ZM63 59 aa3.66□□□□□ -1.82
CPSF7-224ENST00000544990 Q8N9L7 120 aa3.66□□□□□ -1.82
CPSF7-224ENST00000544990 HCG22E2RYF7 251 aa3.65□□□□□ -1.83
CPSF7-224ENST00000544990 K7ERU9 68 aa3.65□□□□□ -1.83
CPSF7-224ENST00000544990 CXCL6P80162 114 aa3.63□□□□□ -1.83
CPSF7-224ENST00000544990 SCGB1A1P11684 91 aa3.62□□□□□ -1.83
CPSF7-224ENST00000544990 Q5W150 140 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms