RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 FP248Q71RG6 208 aaPredicted RBP4.23□□□□□ -1.73
HMGCS2-204ENST00000544913 CYSTM1Q9H1C7 97 aa4.23□□□□□ -1.73
HMGCS2-204ENST00000544913 ZNF706Q9Y5V0 76 aaPredicted RBP4.23□□□□□ -1.73
HMGCS2-204ENST00000544913 HERC2O95714 4834 aa4.23□□□□□ -1.73
HMGCS2-204ENST00000544913 FAM229AH3BQW9 127 aa4.23□□□□□ -1.73
HMGCS2-204ENST00000544913 CDK2AP2O75956 126 aa4.23□□□□□ -1.73
HMGCS2-204ENST00000544913 IGLV7-43P04211 117 aa4.23□□□□□ -1.73
HMGCS2-204ENST00000544913 SMR3BP02814 79 aaPredicted RBP4.22□□□□□ -1.73
HMGCS2-204ENST00000544913 OCR1Q9BZK8 76 aa4.22□□□□□ -1.73
HMGCS2-204ENST00000544913 ZNF861PO60384 105 aa4.21□□□□□ -1.74
HMGCS2-204ENST00000544913 DSCR10P59022 87 aa4.21□□□□□ -1.74
HMGCS2-204ENST00000544913 KTN1-AS1Q86SY8 53 aa4.21□□□□□ -1.74
HMGCS2-204ENST00000544913 RBM12B-AS1Q9P1G2 102 aa4.21□□□□□ -1.74
HMGCS2-204ENST00000544913 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
HMGCS2-204ENST00000544913 H7BZZ5 65 aa4.2□□□□□ -1.74
HMGCS2-204ENST00000544913 NDUFS5O43920 106 aa4.2□□□□□ -1.74
HMGCS2-204ENST00000544913 TMEM254Q8TBM7 123 aa4.2□□□□□ -1.74
HMGCS2-204ENST00000544913 A0A087WSZ3 146 aa4.19□□□□□ -1.74
HMGCS2-204ENST00000544913 HCG22E2RYF7 251 aa4.19□□□□□ -1.74
HMGCS2-204ENST00000544913 LINC00483Q53H64 154 aa4.19□□□□□ -1.74
HMGCS2-204ENST00000544913 Q8N9L7 120 aa4.19□□□□□ -1.74
HMGCS2-204ENST00000544913 LRP1Q07954 4544 aaKnown RBP4.19□□□□□ -1.74
HMGCS2-204ENST00000544913 KRTAP1-4P0C5Y4 121 aa4.18□□□□□ -1.74
HMGCS2-204ENST00000544913 ABCA13Q86UQ4 5058 aa4.17□□□□□ -1.74
HMGCS2-204ENST00000544913 MYCBP2O75592 4640 aa4.17□□□□□ -1.74
HMGCS2-204ENST00000544913 K7EQZ3 153 aa4.17□□□□□ -1.74
HMGCS2-204ENST00000544913 FAT3Q8TDW7 4589 aa4.17□□□□□ -1.74
HMGCS2-204ENST00000544913 NDUFB1O75438 58 aa4.17□□□□□ -1.74
HMGCS2-204ENST00000544913 A8MWP4 228 aa4.16□□□□□ -1.74
HMGCS2-204ENST00000544913 LINC00472Q9H8W2 130 aa4.16□□□□□ -1.74
HMGCS2-204ENST00000544913 ANAPC11Q9NYG5 84 aa4.16□□□□□ -1.74
HMGCS2-204ENST00000544913 SNURFQ9Y675 71 aa4.16□□□□□ -1.74
HMGCS2-204ENST00000544913 H3BPC8 53 aa4.15□□□□□ -1.74
HMGCS2-204ENST00000544913 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.74
HMGCS2-204ENST00000544913 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.74
HMGCS2-204ENST00000544913 FLG2Q5D862 2391 aaPredicted RBP4.15□□□□□ -1.75
HMGCS2-204ENST00000544913 Q5VSD8 79 aa4.15□□□□□ -1.75
HMGCS2-204ENST00000544913 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
HMGCS2-204ENST00000544913 TNXBP22105 4242 aa4.14□□□□□ -1.75
HMGCS2-204ENST00000544913 A0A087X002 238 aa4.14□□□□□ -1.75
HMGCS2-204ENST00000544913 C8orf87E5RJ46 101 aa4.14□□□□□ -1.75
HMGCS2-204ENST00000544913 KRTAP4-5Q9BYR2 181 aa4.14□□□□□ -1.75
HMGCS2-204ENST00000544913 MP68P56378 58 aa4.13□□□□□ -1.75
HMGCS2-204ENST00000544913 SPINK6Q6UWN8 80 aa4.13□□□□□ -1.75
HMGCS2-204ENST00000544913 Q8N1X5 172 aa4.13□□□□□ -1.75
HMGCS2-204ENST00000544913 PRR26Q8N8Z3 221 aa4.13□□□□□ -1.75
HMGCS2-204ENST00000544913 A0A0G2JQZ4 141 aa4.13□□□□□ -1.75
HMGCS2-204ENST00000544913 KRTAP13-2Q52LG2 175 aa4.13□□□□□ -1.75
HMGCS2-204ENST00000544913 CASC2Q6XLA1 102 aa4.13□□□□□ -1.75
HMGCS2-204ENST00000544913 IGLV9-49A0A0B4J1Y8 123 aa4.12□□□□□ -1.75
HMGCS2-204ENST00000544913 KRTAP29-1A8MX34 341 aaPredicted RBP4.12□□□□□ -1.75
HMGCS2-204ENST00000544913 MOBPQ13875 183 aa4.11□□□□□ -1.75
HMGCS2-204ENST00000544913 DEFB116Q30KQ4 102 aa4.11□□□□□ -1.75
HMGCS2-204ENST00000544913 SSBP3-AS1Q7Z2R9 100 aa4.11□□□□□ -1.75
HMGCS2-204ENST00000544913 ZCCHC13Q8WW36 166 aaKnown RBP4.11□□□□□ -1.75
HMGCS2-204ENST00000544913 TP53AIP1Q9HCN2 124 aa4.11□□□□□ -1.75
HMGCS2-204ENST00000544913 PLA2G1BP04054 148 aaKnown RBP4.1□□□□□ -1.75
HMGCS2-204ENST00000544913 Q1T7F1 81 aa4.1□□□□□ -1.75
HMGCS2-204ENST00000544913 FAM229BQ4G0N7 80 aa4.1□□□□□ -1.75
HMGCS2-204ENST00000544913 WFDC13Q8IUB5 93 aa4.1□□□□□ -1.75
HMGCS2-204ENST00000544913 MPLKIPQ8TAP9 179 aa4.1□□□□□ -1.75
HMGCS2-204ENST00000544913 hDV103S1A0JD37 113 aa4.09□□□□□ -1.75
HMGCS2-204ENST00000544913 LCA10Q71F78 164 aa4.09□□□□□ -1.76
HMGCS2-204ENST00000544913 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
HMGCS2-204ENST00000544913 PCLOQ9Y6V0 5065 aa4.08□□□□□ -1.76
HMGCS2-204ENST00000544913 ASB16-AS1Q495Z4 193 aa4.07□□□□□ -1.76
HMGCS2-204ENST00000544913 Q96NJ1 140 aa4.07□□□□□ -1.76
HMGCS2-204ENST00000544913 MMP24-AS1A0A0U1RRL7 71 aa4.07□□□□□ -1.76
HMGCS2-204ENST00000544913 A0A1B0GVX0 72 aa4.06□□□□□ -1.76
HMGCS2-204ENST00000544913 C7orf65Q6ZTY9 151 aa4.06□□□□□ -1.76
HMGCS2-204ENST00000544913 SPANXA2-OT1Q8N9U9 137 aa4.06□□□□□ -1.76
HMGCS2-204ENST00000544913 CYP4F30PQ9H0H9 118 aa4.06□□□□□ -1.76
HMGCS2-204ENST00000544913 H0Y9P7 68 aa4.05□□□□□ -1.76
HMGCS2-204ENST00000544913 MT1HL1P0DM35 61 aa4.05□□□□□ -1.76
HMGCS2-204ENST00000544913 C8orf17Q9NRJ1 99 aa4.05□□□□□ -1.76
HMGCS2-204ENST00000544913 TRAV22A0A0B4J277 110 aa4.05□□□□□ -1.76
HMGCS2-204ENST00000544913 KRTAP10-8P60410 259 aa4.05□□□□□ -1.76
HMGCS2-204ENST00000544913 ATP11AUNQ6ZP68 121 aa4.05□□□□□ -1.76
HMGCS2-204ENST00000544913 LINC00208Q96KT6 92 aa4.05□□□□□ -1.76
HMGCS2-204ENST00000544913 A8MUN3 132 aa4.04□□□□□ -1.76
HMGCS2-204ENST00000544913 C1orf64Q8NEQ6 169 aa4.03□□□□□ -1.76
HMGCS2-204ENST00000544913 MRPL34Q9BQ48 92 aaKnown RBP4.03□□□□□ -1.76
HMGCS2-204ENST00000544913 DMBT1Q9UGM3 2413 aaPredicted RBP4.02□□□□□ -1.77
HMGCS2-204ENST00000544913 IGHV6-1A0A0B4J1U7 121 aa4.01□□□□□ -1.77
HMGCS2-204ENST00000544913 TYMSOSQ8TAI1 123 aa4.01□□□□□ -1.77
HMGCS2-204ENST00000544913 LIMD2Q9BT23 127 aa4.01□□□□□ -1.77
HMGCS2-204ENST00000544913 LCE1DQ5T752 114 aa3.99□□□□□ -1.77
HMGCS2-204ENST00000544913 A6NN06 94 aa3.99□□□□□ -1.77
HMGCS2-204ENST00000544913 IGLV7-46A0A075B6I9 117 aa3.98□□□□□ -1.77
HMGCS2-204ENST00000544913 LINC00304Q8N9R0 145 aa3.98□□□□□ -1.77
HMGCS2-204ENST00000544913 LOC101927531A0A1B0GV80 90 aa3.97□□□□□ -1.77
HMGCS2-204ENST00000544913 SPINK1P00995 79 aa3.96□□□□□ -1.78
HMGCS2-204ENST00000544913 LINC00313P59037 77 aa3.96□□□□□ -1.78
HMGCS2-204ENST00000544913 RPS29P62273 56 aaKnown RBP3.96□□□□□ -1.78
HMGCS2-204ENST00000544913 LINC01554Q52M75 96 aa3.96□□□□□ -1.78
HMGCS2-204ENST00000544913 HERC1Q15751 4861 aa3.96□□□□□ -1.78
HMGCS2-204ENST00000544913 SPAG11AQ6PDA7 123 aa3.95□□□□□ -1.78
HMGCS2-204ENST00000544913 PSPHP1O15172 72 aa3.94□□□□□ -1.78
HMGCS2-204ENST00000544913 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
HMGCS2-204ENST00000544913 Q8N9P0 234 aaPredicted RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms