RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 DEFB105AQ8NG35 78 aa3.88□□□□□ -1.79
CDCA3-209ENST00000544610 CCKP06307 115 aa3.87□□□□□ -1.79
CDCA3-209ENST00000544610 Q6ZQT0 140 aa3.87□□□□□ -1.79
CDCA3-209ENST00000544610 MTURNQ8N3F0 131 aa3.87□□□□□ -1.79
CDCA3-209ENST00000544610 RPS29P62273 56 aaKnown RBP3.86□□□□□ -1.79
CDCA3-209ENST00000544610 Q5XG85 94 aa3.86□□□□□ -1.79
CDCA3-209ENST00000544610 Q6ZVQ6 151 aa3.86□□□□□ -1.79
CDCA3-209ENST00000544610 SPAG11AQ6PDA7 123 aa3.85□□□□□ -1.79
CDCA3-209ENST00000544610 MUC17Q685J3 4493 aa3.84□□□□□ -1.79
CDCA3-209ENST00000544610 TRBV7-7A0A0K0K1E9 115 aa3.84□□□□□ -1.79
CDCA3-209ENST00000544610 IGFL1Q6UW32 110 aa3.84□□□□□ -1.79
CDCA3-209ENST00000544610 C14orf132Q9NPU4 83 aa3.84□□□□□ -1.79
CDCA3-209ENST00000544610 A0A0U1RQV1 116 aa3.83□□□□□ -1.8
CDCA3-209ENST00000544610 PRR4Q16378 134 aa3.83□□□□□ -1.8
CDCA3-209ENST00000544610 ASB16-AS1Q495Z4 193 aa3.83□□□□□ -1.8
CDCA3-209ENST00000544610 C3orf22Q8N5N4 141 aa3.83□□□□□ -1.8
CDCA3-209ENST00000544610 SS18L2Q9UHA2 77 aa3.83□□□□□ -1.8
CDCA3-209ENST00000544610 A0A087X002 238 aa3.82□□□□□ -1.8
CDCA3-209ENST00000544610 SPINK1P00995 79 aa3.82□□□□□ -1.8
CDCA3-209ENST00000544610 MOBPQ13875 183 aa3.82□□□□□ -1.8
CDCA3-209ENST00000544610 C9orf153Q5TBE3 101 aa3.82□□□□□ -1.8
CDCA3-209ENST00000544610 A0A1W2PNM2 257 aa3.81□□□□□ -1.8
CDCA3-209ENST00000544610 KRTAP13-2Q52LG2 175 aa3.81□□□□□ -1.8
CDCA3-209ENST00000544610 ATP5EP2Q5VTU8 51 aa3.81□□□□□ -1.8
CDCA3-209ENST00000544610 TYMSOSQ8TAI1 123 aa3.81□□□□□ -1.8
CDCA3-209ENST00000544610 UBL5Q9BZL1 73 aa3.81□□□□□ -1.8
CDCA3-209ENST00000544610 KRTAP15-1Q3LI76 137 aa3.8□□□□□ -1.8
CDCA3-209ENST00000544610 LIMD2Q9BT23 127 aa3.8□□□□□ -1.8
CDCA3-209ENST00000544610 J3KT08 172 aa3.79□□□□□ -1.8
CDCA3-209ENST00000544610 SEC61GP60059 68 aa3.79□□□□□ -1.8
CDCA3-209ENST00000544610 LINC00643Q86TS7 51 aa3.79□□□□□ -1.8
CDCA3-209ENST00000544610 ANAPC11Q9NYG5 84 aa3.79□□□□□ -1.8
CDCA3-209ENST00000544610 CXCL6P80162 114 aa3.78□□□□□ -1.8
CDCA3-209ENST00000544610 LINC00304Q8N9R0 145 aa3.78□□□□□ -1.8
CDCA3-209ENST00000544610 LINC00846Q9NV44 126 aa3.78□□□□□ -1.8
CDCA3-209ENST00000544610 A0A087WSZ3 146 aa3.77□□□□□ -1.81
CDCA3-209ENST00000544610 NREPQ16612 68 aa3.77□□□□□ -1.81
CDCA3-209ENST00000544610 IMUPQ9GZP8 106 aa3.77□□□□□ -1.81
CDCA3-209ENST00000544610 VPS25Q9BRG1 176 aa3.76□□□□□ -1.81
CDCA3-209ENST00000544610 A0A1B0GV72 72 aa3.75□□□□□ -1.81
CDCA3-209ENST00000544610 SIGMAR1Q99720 223 aa3.75□□□□□ -1.81
CDCA3-209ENST00000544610 LINC00472Q9H8W2 130 aa3.75□□□□□ -1.81
CDCA3-209ENST00000544610 BPY2O14599 106 aa3.73□□□□□ -1.81
CDCA3-209ENST00000544610 TPRXLQ17RH7 258 aa3.73□□□□□ -1.81
CDCA3-209ENST00000544610 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
CDCA3-209ENST00000544610 FP248Q71RG6 208 aaPredicted RBP3.72□□□□□ -1.81
CDCA3-209ENST00000544610 RETNLBQ9BQ08 111 aa3.72□□□□□ -1.81
CDCA3-209ENST00000544610 A0A0G2JQZ4 141 aa3.71□□□□□ -1.82
CDCA3-209ENST00000544610 NDUFB1O75438 58 aa3.71□□□□□ -1.82
CDCA3-209ENST00000544610 Q96NJ1 140 aa3.71□□□□□ -1.82
CDCA3-209ENST00000544610 A8MWP4 228 aa3.7□□□□□ -1.82
CDCA3-209ENST00000544610 C1orf195Q5TG92 126 aa3.7□□□□□ -1.82
CDCA3-209ENST00000544610 IGLV7-46A0A075B6I9 117 aa3.69□□□□□ -1.82
CDCA3-209ENST00000544610 HRCT1Q6UXD1 115 aa3.69□□□□□ -1.82
CDCA3-209ENST00000544610 PRR15Q8IV56 129 aa3.69□□□□□ -1.82
CDCA3-209ENST00000544610 C8orf87E5RJ46 101 aa3.68□□□□□ -1.82
CDCA3-209ENST00000544610 IGKV4-1P06312 121 aa3.68□□□□□ -1.82
CDCA3-209ENST00000544610 DSCR10P59022 87 aa3.68□□□□□ -1.82
CDCA3-209ENST00000544610 A0A1B0GVX0 72 aa3.67□□□□□ -1.82
CDCA3-209ENST00000544610 FSIP2Q5CZC0 6907 aa3.67□□□□□ -1.82
CDCA3-209ENST00000544610 IGKV2-30P06310 120 aa3.66□□□□□ -1.82
CDCA3-209ENST00000544610 SCGB1A1P11684 91 aa3.66□□□□□ -1.82
CDCA3-209ENST00000544610 IGKV3D-7A0A0C4DH55 119 aa3.65□□□□□ -1.83
CDCA3-209ENST00000544610 MT-ATP8P03928 68 aa3.65□□□□□ -1.83
CDCA3-209ENST00000544610 K7EQZ3 153 aa3.64□□□□□ -1.83
CDCA3-209ENST00000544610 HIST1H4AP62805 103 aaKnown RBP3.64□□□□□ -1.83
CDCA3-209ENST00000544610 SMIM20Q8N5G0 67 aa3.64□□□□□ -1.83
CDCA3-209ENST00000544610 HCG22E2RYF7 251 aa3.63□□□□□ -1.83
CDCA3-209ENST00000544610 LINC00313P59037 77 aa3.63□□□□□ -1.83
CDCA3-209ENST00000544610 KRTAP13-3Q3SY46 172 aa3.63□□□□□ -1.83
CDCA3-209ENST00000544610 C8orf17Q9NRJ1 99 aa3.63□□□□□ -1.83
CDCA3-209ENST00000544610 TMEM254Q8TBM7 123 aa3.62□□□□□ -1.83
CDCA3-209ENST00000544610 MMP24-AS1A0A0U1RRL7 71 aa3.61□□□□□ -1.83
CDCA3-209ENST00000544610 hDV103S1A0JD37 113 aa3.61□□□□□ -1.83
CDCA3-209ENST00000544610 DEFB116Q30KQ4 102 aa3.61□□□□□ -1.83
CDCA3-209ENST00000544610 KRTAP4-1Q9BYQ7 146 aa3.61□□□□□ -1.83
CDCA3-209ENST00000544610 TP53AIP1Q9HCN2 124 aa3.61□□□□□ -1.83
CDCA3-209ENST00000544610 IGHV6-1A0A0B4J1U7 121 aa3.6□□□□□ -1.83
CDCA3-209ENST00000544610 ATOX1O00244 68 aa3.6□□□□□ -1.83
CDCA3-209ENST00000544610 CASC2Q6XLA1 102 aa3.6□□□□□ -1.83
CDCA3-209ENST00000544610 Q8N9P0 234 aaPredicted RBP3.6□□□□□ -1.83
CDCA3-209ENST00000544610 CRCT1Q9UGL9 99 aa3.6□□□□□ -1.83
CDCA3-209ENST00000544610 Q8N9L7 120 aa3.59□□□□□ -1.83
CDCA3-209ENST00000544610 MRPL34Q9BQ48 92 aaKnown RBP3.59□□□□□ -1.83
CDCA3-209ENST00000544610 FAM236AA0A1B0GUQ0 79 aa3.58□□□□□ -1.84
CDCA3-209ENST00000544610 FAM236BA0A1B0GV22 79 aa3.58□□□□□ -1.84
CDCA3-209ENST00000544610 KRTAP16-1A8MUX0 517 aa3.58□□□□□ -1.84
CDCA3-209ENST00000544610 C20orf166-AS1Q96NR2 134 aa3.58□□□□□ -1.84
CDCA3-209ENST00000544610 OCR1Q9BZK8 76 aa3.58□□□□□ -1.84
CDCA3-209ENST00000544610 A0A087WVE0 104 aa3.57□□□□□ -1.84
CDCA3-209ENST00000544610 A8MUU9 505 aa3.57□□□□□ -1.84
CDCA3-209ENST00000544610 UQCRQO14949 82 aa3.56□□□□□ -1.84
CDCA3-209ENST00000544610 TRAV7A0A075B6U4 112 aa3.55□□□□□ -1.84
CDCA3-209ENST00000544610 H3BPC8 53 aa3.55□□□□□ -1.84
CDCA3-209ENST00000544610 C5orf47Q569G3 176 aa3.55□□□□□ -1.84
CDCA3-209ENST00000544610 KRTAP5-11Q6L8G4 156 aa3.55□□□□□ -1.84
CDCA3-209ENST00000544610 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
CDCA3-209ENST00000544610 KRTAP19-2Q3LHN2 52 aa3.54□□□□□ -1.84
CDCA3-209ENST00000544610 WFDC13Q8IUB5 93 aa3.54□□□□□ -1.84
CDCA3-209ENST00000544610 SERP2Q8N6R1 65 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms