RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 CD164Q04900 197 aa2.18□□□□□ -2.06
BRCA2-206ENST00000544455 PRR26Q8N8Z3 221 aa2.17□□□□□ -2.06
BRCA2-206ENST00000544455 KRTAP1-4P0C5Y4 121 aa2.17□□□□□ -2.06
BRCA2-206ENST00000544455 FRAS1Q86XX4 4008 aa2.17□□□□□ -2.06
BRCA2-206ENST00000544455 A8MU10 97 aa2.17□□□□□ -2.06
BRCA2-206ENST00000544455 DNAH5Q8TE73 4624 aa2.17□□□□□ -2.06
BRCA2-206ENST00000544455 Q8N9P0 234 aaPredicted RBP2.17□□□□□ -2.06
BRCA2-206ENST00000544455 A8MUN3 132 aa2.17□□□□□ -2.06
BRCA2-206ENST00000544455 PRKDCP78527 4128 aaKnown RBP2.16□□□□□ -2.06
BRCA2-206ENST00000544455 KMT2AQ03164 3969 aa2.16□□□□□ -2.06
BRCA2-206ENST00000544455 SRRM2Q9UQ35 2752 aaKnown RBP2.16□□□□□ -2.06
BRCA2-206ENST00000544455 C9orf92A6NGG3 77 aa2.16□□□□□ -2.06
BRCA2-206ENST00000544455 LINC00313P59037 77 aa2.15□□□□□ -2.06
BRCA2-206ENST00000544455 Q6ZSA8 131 aa2.15□□□□□ -2.06
BRCA2-206ENST00000544455 NBEAL1Q6ZS30 2694 aa2.15□□□□□ -2.06
BRCA2-206ENST00000544455 TYMSOSQ8TAI1 123 aa2.15□□□□□ -2.07
BRCA2-206ENST00000544455 COA5Q86WW8 74 aa2.15□□□□□ -2.07
BRCA2-206ENST00000544455 IGLV7-46A0A075B6I9 117 aa2.15□□□□□ -2.07
BRCA2-206ENST00000544455 LIMD2Q9BT23 127 aa2.14□□□□□ -2.07
BRCA2-206ENST00000544455 TP53AIP1Q9HCN2 124 aa2.14□□□□□ -2.07
BRCA2-206ENST00000544455 MGAM2Q2M2H8 2515 aa2.14□□□□□ -2.07
BRCA2-206ENST00000544455 LOC101927531A0A1B0GV80 90 aa2.14□□□□□ -2.07
BRCA2-206ENST00000544455 ASB16-AS1Q495Z4 193 aa2.14□□□□□ -2.07
BRCA2-206ENST00000544455 SPAG11AQ6PDA7 123 aa2.14□□□□□ -2.07
BRCA2-206ENST00000544455 DNAH11Q96DT5 4516 aa2.14□□□□□ -2.07
BRCA2-206ENST00000544455 HRES1P13985 223 aa2.14□□□□□ -2.07
BRCA2-206ENST00000544455 SSBP3-AS1Q7Z2R9 100 aa2.14□□□□□ -2.07
BRCA2-206ENST00000544455 PRR15LQ9BU68 103 aa2.13□□□□□ -2.07
BRCA2-206ENST00000544455 IGKV2D-30A0A075B6S6 120 aa2.13□□□□□ -2.07
BRCA2-206ENST00000544455 IGKV2-30P06310 120 aa2.13□□□□□ -2.07
BRCA2-206ENST00000544455 TENM2Q9NT68 2774 aa2.13□□□□□ -2.07
BRCA2-206ENST00000544455 PMAIP1Q13794 54 aa2.12□□□□□ -2.07
BRCA2-206ENST00000544455 C4orf48Q5BLP8 95 aa2.12□□□□□ -2.07
BRCA2-206ENST00000544455 STAB2Q8WWQ8 2551 aa2.12□□□□□ -2.07
BRCA2-206ENST00000544455 FAT1Q14517 4588 aa2.12□□□□□ -2.07
BRCA2-206ENST00000544455 RYR3Q15413 4870 aa2.12□□□□□ -2.07
BRCA2-206ENST00000544455 SPINK1P00995 79 aa2.11□□□□□ -2.07
BRCA2-206ENST00000544455 DNAH6Q9C0G6 4158 aa2.11□□□□□ -2.07
BRCA2-206ENST00000544455 A0A1B0GVY2 172 aa2.11□□□□□ -2.07
BRCA2-206ENST00000544455 KRTAP13-3Q3SY46 172 aa2.11□□□□□ -2.07
BRCA2-206ENST00000544455 KMT2CQ8NEZ4 4911 aaKnown RBP2.11□□□□□ -2.07
BRCA2-206ENST00000544455 SACSQ9NZJ4 4579 aa2.11□□□□□ -2.07
BRCA2-206ENST00000544455 KRTAP16-1A8MUX0 517 aa2.11□□□□□ -2.07
BRCA2-206ENST00000544455 Q5VV11 94 aa2.11□□□□□ -2.07
BRCA2-206ENST00000544455 CHKB-CPT1BH3BT56 60 aa2.11□□□□□ -2.07
BRCA2-206ENST00000544455 ALMS1Q8TCU4 4167 aa2.11□□□□□ -2.07
BRCA2-206ENST00000544455 ATP11AUNQ6ZP68 121 aa2.1□□□□□ -2.07
BRCA2-206ENST00000544455 LINC00304Q8N9R0 145 aa2.1□□□□□ -2.07
BRCA2-206ENST00000544455 Q8N1X5 172 aa2.1□□□□□ -2.07
BRCA2-206ENST00000544455 KRTAP17-1Q9BYP8 105 aa2.1□□□□□ -2.07
BRCA2-206ENST00000544455 DYNC2H1Q8NCM8 4307 aaKnown RBP2.1□□□□□ -2.07
BRCA2-206ENST00000544455 FAT2Q9NYQ8 4349 aa2.1□□□□□ -2.07
BRCA2-206ENST00000544455 RYR1P21817 5038 aa2.1□□□□□ -2.07
BRCA2-206ENST00000544455 C8orf87E5RJ46 101 aa2.09□□□□□ -2.07
BRCA2-206ENST00000544455 SEC61GP60059 68 aa2.09□□□□□ -2.08
BRCA2-206ENST00000544455 SPTSSBQ8NFR3 76 aa2.08□□□□□ -2.08
BRCA2-206ENST00000544455 LINC01558Q9Y6Z2 57 aa2.08□□□□□ -2.08
BRCA2-206ENST00000544455 KRTAP10-4P60372 401 aaPredicted RBP2.08□□□□□ -2.08
BRCA2-206ENST00000544455 RYR2Q92736 4967 aa2.08□□□□□ -2.08
BRCA2-206ENST00000544455 C7orf65Q6ZTY9 151 aa2.08□□□□□ -2.08
BRCA2-206ENST00000544455 SPINK7P58062 85 aa2.08□□□□□ -2.08
BRCA2-206ENST00000544455 Q75L30 129 aa2.07□□□□□ -2.08
BRCA2-206ENST00000544455 DYNC1H1Q14204 4646 aaKnown RBP2.07□□□□□ -2.08
BRCA2-206ENST00000544455 CDC42SE1Q9NRR8 79 aa2.07□□□□□ -2.08
BRCA2-206ENST00000544455 FAM229AH3BQW9 127 aa2.07□□□□□ -2.08
BRCA2-206ENST00000544455 LCA10Q71F78 164 aa2.07□□□□□ -2.08
BRCA2-206ENST00000544455 PKD1P98161 4303 aa2.07□□□□□ -2.08
BRCA2-206ENST00000544455 A6NED7 52 aa2.07□□□□□ -2.08
BRCA2-206ENST00000544455 KRTAP21-3Q3LHN1 58 aa2.06□□□□□ -2.08
BRCA2-206ENST00000544455 KTN1-AS1Q86SY8 53 aa2.06□□□□□ -2.08
BRCA2-206ENST00000544455 ACYP2P14621 99 aa2.06□□□□□ -2.08
BRCA2-206ENST00000544455 Q5VSD8 79 aa2.06□□□□□ -2.08
BRCA2-206ENST00000544455 EPPK1P58107 5090 aaKnown RBP2.04□□□□□ -2.08
BRCA2-206ENST00000544455 DMAC1Q96GE9 116 aa2.04□□□□□ -2.08
BRCA2-206ENST00000544455 LPAP08519 4548 aa2.03□□□□□ -2.08
BRCA2-206ENST00000544455 TGP01266 2768 aa2.03□□□□□ -2.08
BRCA2-206ENST00000544455 A0A1B0GU69 56 aa2.02□□□□□ -2.09
BRCA2-206ENST00000544455 APOBP04114 4563 aaKnown RBP2.02□□□□□ -2.09
BRCA2-206ENST00000544455 KRTAP3-1Q9BYR8 98 aa2.02□□□□□ -2.09
BRCA2-206ENST00000544455 UQCR11O14957 56 aa2.01□□□□□ -2.09
BRCA2-206ENST00000544455 PKHD1P08F94 4074 aa2.01□□□□□ -2.09
BRCA2-206ENST00000544455 A6NN06 94 aa2.01□□□□□ -2.09
BRCA2-206ENST00000544455 KRTAP4-5Q9BYR2 181 aa2.01□□□□□ -2.09
BRCA2-206ENST00000544455 LRP1Q07954 4544 aaKnown RBP2□□□□□ -2.09
BRCA2-206ENST00000544455 KIAA1109Q2LD37 5005 aa2□□□□□ -2.09
BRCA2-206ENST00000544455 RPS29P62273 56 aaKnown RBP1.99□□□□□ -2.09
BRCA2-206ENST00000544455 FAT4Q6V0I7 4981 aa1.99□□□□□ -2.09
BRCA2-206ENST00000544455 KRTAP10-8P60410 259 aa1.99□□□□□ -2.09
BRCA2-206ENST00000544455 C20orf166-AS1Q96NR2 134 aa1.99□□□□□ -2.09
BRCA2-206ENST00000544455 SPATA8Q6RVD6 105 aa1.99□□□□□ -2.09
BRCA2-206ENST00000544455 A8MUU9 505 aa1.98□□□□□ -2.09
BRCA2-206ENST00000544455 ADM2Q7Z4H4 148 aa1.98□□□□□ -2.09
BRCA2-206ENST00000544455 PRAC1Q96KF2 57 aa1.97□□□□□ -2.09
BRCA2-206ENST00000544455 XP32Q5T750 250 aa1.97□□□□□ -2.09
BRCA2-206ENST00000544455 MIR22HGQ0VDD5 57 aa1.97□□□□□ -2.09
BRCA2-206ENST00000544455 RBM12B-AS1Q9P1G2 102 aa1.96□□□□□ -2.09
BRCA2-206ENST00000544455 VPS13BQ7Z7G8 4022 aa1.96□□□□□ -2.1
BRCA2-206ENST00000544455 HECTD4Q9Y4D8 3996 aa1.96□□□□□ -2.1
BRCA2-206ENST00000544455 MT1HL1P0DM35 61 aa1.96□□□□□ -2.1
BRCA2-206ENST00000544455 FAT3Q8TDW7 4589 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms