RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 VPS25Q9BRG1 176 aa3.72□□□□□ -1.81
NUP43-206ENST00000543637 UQCR10Q9UDW1 63 aa3.72□□□□□ -1.81
NUP43-206ENST00000543637 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
NUP43-206ENST00000543637 RBM3P98179 157 aaKnown RBP3.71□□□□□ -1.82
NUP43-206ENST00000543637 UBE2V1Q13404 147 aa3.71□□□□□ -1.82
NUP43-206ENST00000543637 C21orf62-AS1Q17RA5 79 aa3.71□□□□□ -1.82
NUP43-206ENST00000543637 FAM236DA0A1B0GTK5 79 aa3.7□□□□□ -1.82
NUP43-206ENST00000543637 FAM236CP0DP71 79 aa3.7□□□□□ -1.82
NUP43-206ENST00000543637 DEFB116Q30KQ4 102 aa3.7□□□□□ -1.82
NUP43-206ENST00000543637 IGHV6-1A0A0B4J1U7 121 aa3.69□□□□□ -1.82
NUP43-206ENST00000543637 K7ERJ3 54 aa3.69□□□□□ -1.82
NUP43-206ENST00000543637 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
NUP43-206ENST00000543637 C9JAW5 83 aa3.68□□□□□ -1.82
NUP43-206ENST00000543637 BAALC-AS2P0C853 105 aa3.68□□□□□ -1.82
NUP43-206ENST00000543637 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
NUP43-206ENST00000543637 RBM12B-AS1Q9P1G2 102 aa3.68□□□□□ -1.82
NUP43-206ENST00000543637 TMA7Q9Y2S6 64 aaKnown RBP3.68□□□□□ -1.82
NUP43-206ENST00000543637 C8orf87E5RJ46 101 aa3.67□□□□□ -1.82
NUP43-206ENST00000543637 J3KT08 172 aa3.67□□□□□ -1.82
NUP43-206ENST00000543637 NDUFB1O75438 58 aa3.67□□□□□ -1.82
NUP43-206ENST00000543637 MTURNQ8N3F0 131 aa3.67□□□□□ -1.82
NUP43-206ENST00000543637 LINC00472Q9H8W2 130 aa3.67□□□□□ -1.82
NUP43-206ENST00000543637 A0A1B0GVX0 72 aa3.65□□□□□ -1.83
NUP43-206ENST00000543637 JMJD7-PLA2G4BH0Y9G9 81 aa3.65□□□□□ -1.83
NUP43-206ENST00000543637 ATXN8Q156A1 80 aa3.65□□□□□ -1.83
NUP43-206ENST00000543637 KRTAP16-1A8MUX0 517 aa3.64□□□□□ -1.83
NUP43-206ENST00000543637 M0R143 59 aa3.64□□□□□ -1.83
NUP43-206ENST00000543637 A0A1B0GW54 56 aa3.63□□□□□ -1.83
NUP43-206ENST00000543637 PDE6GP18545 87 aa3.63□□□□□ -1.83
NUP43-206ENST00000543637 LYRM7Q5U5X0 104 aa3.63□□□□□ -1.83
NUP43-206ENST00000543637 NOTCH2NLQ7Z3S9 236 aa3.63□□□□□ -1.83
NUP43-206ENST00000543637 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
NUP43-206ENST00000543637 Q6ZQT0 140 aa3.62□□□□□ -1.83
NUP43-206ENST00000543637 NREPQ16612 68 aa3.6□□□□□ -1.83
NUP43-206ENST00000543637 ZCCHC13Q8WW36 166 aaKnown RBP3.6□□□□□ -1.83
NUP43-206ENST00000543637 HRES1P13985 223 aa3.59□□□□□ -1.83
NUP43-206ENST00000543637 NAA38Q9BRA0 125 aaKnown RBP3.59□□□□□ -1.83
NUP43-206ENST00000543637 LOC110117498A0A087WWA1 95 aa3.58□□□□□ -1.84
NUP43-206ENST00000543637 A8MWP4 228 aa3.58□□□□□ -1.84
NUP43-206ENST00000543637 SPINK7P58062 85 aa3.58□□□□□ -1.84
NUP43-206ENST00000543637 C8orf17Q9NRJ1 99 aa3.58□□□□□ -1.84
NUP43-206ENST00000543637 TSTD3H0UI37 97 aa3.57□□□□□ -1.84
NUP43-206ENST00000543637 Q8N9P0 234 aaPredicted RBP3.57□□□□□ -1.84
NUP43-206ENST00000543637 KRTAP9-8Q9BYQ0 159 aa3.57□□□□□ -1.84
NUP43-206ENST00000543637 C14orf132Q9NPU4 83 aa3.57□□□□□ -1.84
NUP43-206ENST00000543637 BATFQ16520 125 aa3.56□□□□□ -1.84
NUP43-206ENST00000543637 Q6ZVQ6 151 aa3.56□□□□□ -1.84
NUP43-206ENST00000543637 MPLKIPQ8TAP9 179 aa3.56□□□□□ -1.84
NUP43-206ENST00000543637 NDUFS5O43920 106 aa3.55□□□□□ -1.84
NUP43-206ENST00000543637 SMIM6P0DI80 62 aa3.55□□□□□ -1.84
NUP43-206ENST00000543637 KRTAP10-10P60014 251 aa3.55□□□□□ -1.84
NUP43-206ENST00000543637 IGKV3D-7A0A0C4DH55 119 aa3.54□□□□□ -1.84
NUP43-206ENST00000543637 PRR15Q8IV56 129 aa3.54□□□□□ -1.84
NUP43-206ENST00000543637 TMEM254Q8TBM7 123 aa3.53□□□□□ -1.84
NUP43-206ENST00000543637 MRPL34Q9BQ48 92 aaKnown RBP3.53□□□□□ -1.84
NUP43-206ENST00000543637 hDV103S1A0JD37 113 aa3.52□□□□□ -1.85
NUP43-206ENST00000543637 H3BT86 120 aa3.52□□□□□ -1.85
NUP43-206ENST00000543637 WFDC13Q8IUB5 93 aa3.52□□□□□ -1.85
NUP43-206ENST00000543637 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
NUP43-206ENST00000543637 C9orf118A6NHY6 69 aa3.51□□□□□ -1.85
NUP43-206ENST00000543637 MT2AP02795 61 aa3.51□□□□□ -1.85
NUP43-206ENST00000543637 LINC00846Q9NV44 126 aa3.51□□□□□ -1.85
NUP43-206ENST00000543637 BPY2O14599 106 aa3.5□□□□□ -1.85
NUP43-206ENST00000543637 MMP24-AS1A0A0U1RRL7 71 aa3.49□□□□□ -1.85
NUP43-206ENST00000543637 A0A1W2PPM0 123 aa3.49□□□□□ -1.85
NUP43-206ENST00000543637 K7EQZ3 153 aa3.48□□□□□ -1.85
NUP43-206ENST00000543637 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
NUP43-206ENST00000543637 TAX1BP3O14907 124 aa3.47□□□□□ -1.85
NUP43-206ENST00000543637 MT1FP04733 61 aa3.47□□□□□ -1.85
NUP43-206ENST00000543637 H1FX-AS1Q4G0G2 97 aa3.47□□□□□ -1.85
NUP43-206ENST00000543637 IGKV2D-30A0A075B6S6 120 aa3.46□□□□□ -1.86
NUP43-206ENST00000543637 H3BS24 57 aa3.46□□□□□ -1.86
NUP43-206ENST00000543637 IGKV2-30P06310 120 aa3.46□□□□□ -1.86
NUP43-206ENST00000543637 CASC2Q6XLA1 102 aa3.46□□□□□ -1.86
NUP43-206ENST00000543637 C7orf65Q6ZTY9 151 aa3.45□□□□□ -1.86
NUP43-206ENST00000543637 UBL5Q9BZL1 73 aa3.45□□□□□ -1.86
NUP43-206ENST00000543637 SPCS1Q9Y6A9 102 aa3.45□□□□□ -1.86
NUP43-206ENST00000543637 FSIP2Q5CZC0 6907 aa3.45□□□□□ -1.86
NUP43-206ENST00000543637 HCG22E2RYF7 251 aa3.44□□□□□ -1.86
NUP43-206ENST00000543637 CXCL6P80162 114 aa3.43□□□□□ -1.86
NUP43-206ENST00000543637 LOC105371267A0A1B0GV96 52 aa3.42□□□□□ -1.86
NUP43-206ENST00000543637 Q5W150 140 aa3.42□□□□□ -1.86
NUP43-206ENST00000543637 COL5A1-AS1Q5SY13 56 aa3.41□□□□□ -1.86
NUP43-206ENST00000543637 Q8N9L7 120 aa3.41□□□□□ -1.86
NUP43-206ENST00000543637 C4orf26Q17RF5 130 aa3.39□□□□□ -1.87
NUP43-206ENST00000543637 GTF2H5Q6ZYL4 71 aa3.38□□□□□ -1.87
NUP43-206ENST00000543637 TP53AIP1Q9HCN2 124 aa3.38□□□□□ -1.87
NUP43-206ENST00000543637 FAM236AA0A1B0GUQ0 79 aa3.36□□□□□ -1.87
NUP43-206ENST00000543637 FAM236BA0A1B0GV22 79 aa3.36□□□□□ -1.87
NUP43-206ENST00000543637 F8W1H4 67 aa3.36□□□□□ -1.87
NUP43-206ENST00000543637 K7EP34 96 aa3.36□□□□□ -1.87
NUP43-206ENST00000543637 KRTAP19-6Q3LI70 58 aa3.35□□□□□ -1.87
NUP43-206ENST00000543637 C5orf47Q569G3 176 aa3.35□□□□□ -1.87
NUP43-206ENST00000543637 CSAG1Q6PB30 78 aa3.35□□□□□ -1.87
NUP43-206ENST00000543637 C1orf64Q8NEQ6 169 aa3.35□□□□□ -1.87
NUP43-206ENST00000543637 S4R3F8 94 aa3.35□□□□□ -1.87
NUP43-206ENST00000543637 USH2AO75445 5202 aa3.34□□□□□ -1.87
NUP43-206ENST00000543637 PRO0461Q9UI25 63 aa3.34□□□□□ -1.87
NUP43-206ENST00000543637 ETDBQ3ZM63 59 aa3.31□□□□□ -1.88
NUP43-206ENST00000543637 SSPOA2VEC9 5147 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms