RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 NOTCH2NLQ7Z3S9 236 aa5.83□□□□□ -1.48
DDB1-222ENST00000543627 SPCS1Q9Y6A9 102 aa5.83□□□□□ -1.48
DDB1-222ENST00000543627 LOC110117498A0A087WWA1 95 aa5.82□□□□□ -1.48
DDB1-222ENST00000543627 PDE6GP18545 87 aa5.82□□□□□ -1.48
DDB1-222ENST00000543627 COL5A1-AS1Q5SY13 56 aa5.81□□□□□ -1.48
DDB1-222ENST00000543627 C20orf166-AS1Q96NR2 134 aa5.81□□□□□ -1.48
DDB1-222ENST00000543627 A8MUU9 505 aa5.8□□□□□ -1.48
DDB1-222ENST00000543627 H3BT86 120 aa5.8□□□□□ -1.48
DDB1-222ENST00000543627 NDUFB1O75438 58 aa5.8□□□□□ -1.48
DDB1-222ENST00000543627 A0A1B0GVX0 72 aa5.79□□□□□ -1.48
DDB1-222ENST00000543627 J3KT08 172 aa5.79□□□□□ -1.48
DDB1-222ENST00000543627 NREPQ16612 68 aa5.79□□□□□ -1.48
DDB1-222ENST00000543627 C8orf87E5RJ46 101 aa5.77□□□□□ -1.49
DDB1-222ENST00000543627 KRTAP16-1A8MUX0 517 aa5.76□□□□□ -1.49
DDB1-222ENST00000543627 LCE2CQ5TA81 110 aa5.76□□□□□ -1.49
DDB1-222ENST00000543627 A0A1B0GW54 56 aa5.75□□□□□ -1.49
DDB1-222ENST00000543627 M0R2T5 61 aa5.75□□□□□ -1.49
DDB1-222ENST00000543627 KRTAP19-2Q3LHN2 52 aa5.74□□□□□ -1.49
DDB1-222ENST00000543627 A8MWP4 228 aa5.73□□□□□ -1.49
DDB1-222ENST00000543627 IGKV3D-7A0A0C4DH55 119 aa5.72□□□□□ -1.49
DDB1-222ENST00000543627 A0A1B0GV90 55 aa5.72□□□□□ -1.49
DDB1-222ENST00000543627 MT1HP80294 61 aa5.72□□□□□ -1.49
DDB1-222ENST00000543627 C8orf17Q9NRJ1 99 aa5.72□□□□□ -1.49
DDB1-222ENST00000543627 K7EP34 96 aa5.71□□□□□ -1.5
DDB1-222ENST00000543627 SMCPP49901 116 aaPredicted RBP5.71□□□□□ -1.5
DDB1-222ENST00000543627 FAM236DA0A1B0GTK5 79 aa5.69□□□□□ -1.5
DDB1-222ENST00000543627 BPY2O14599 106 aa5.69□□□□□ -1.5
DDB1-222ENST00000543627 FAM236CP0DP71 79 aa5.69□□□□□ -1.5
DDB1-222ENST00000543627 GTF2H5Q6ZYL4 71 aa5.69□□□□□ -1.5
DDB1-222ENST00000543627 CRCT1Q9UGL9 99 aa5.69□□□□□ -1.5
DDB1-222ENST00000543627 PRR15Q8IV56 129 aa5.68□□□□□ -1.5
DDB1-222ENST00000543627 NDUFS5O43920 106 aa5.67□□□□□ -1.5
DDB1-222ENST00000543627 Q6ZVQ6 151 aa5.67□□□□□ -1.5
DDB1-222ENST00000543627 K7EQZ3 153 aa5.66□□□□□ -1.5
DDB1-222ENST00000543627 ZCCHC13Q8WW36 166 aaKnown RBP5.66□□□□□ -1.5
DDB1-222ENST00000543627 PRO0461Q9UI25 63 aa5.66□□□□□ -1.5
DDB1-222ENST00000543627 RBM12B-AS1Q9P1G2 102 aa5.64□□□□□ -1.51
DDB1-222ENST00000543627 hDV103S1A0JD37 113 aa5.63□□□□□ -1.51
DDB1-222ENST00000543627 Q8N9L7 120 aa5.63□□□□□ -1.51
DDB1-222ENST00000543627 Q8N9P0 234 aaPredicted RBP5.63□□□□□ -1.51
DDB1-222ENST00000543627 MRPL34Q9BQ48 92 aaKnown RBP5.63□□□□□ -1.51
DDB1-222ENST00000543627 MMP24-AS1A0A0U1RRL7 71 aa5.62□□□□□ -1.51
DDB1-222ENST00000543627 WFDC13Q8IUB5 93 aa5.62□□□□□ -1.51
DDB1-222ENST00000543627 UBL5Q9BZL1 73 aa5.62□□□□□ -1.51
DDB1-222ENST00000543627 F8W1H4 67 aa5.61□□□□□ -1.51
DDB1-222ENST00000543627 SPINK7P58062 85 aa5.61□□□□□ -1.51
DDB1-222ENST00000543627 LCE2DQ5TA82 110 aaPredicted RBP5.61□□□□□ -1.51
DDB1-222ENST00000543627 TMEM254Q8TBM7 123 aa5.61□□□□□ -1.51
DDB1-222ENST00000543627 LINC00846Q9NV44 126 aa5.61□□□□□ -1.51
DDB1-222ENST00000543627 FSIP2Q5CZC0 6907 aa5.6□□□□□ -1.51
DDB1-222ENST00000543627 KRTAP10-6P60371 365 aaPredicted RBP5.6□□□□□ -1.51
DDB1-222ENST00000543627 ETDBQ3ZM63 59 aa5.6□□□□□ -1.51
DDB1-222ENST00000543627 HRES1P13985 223 aa5.59□□□□□ -1.51
DDB1-222ENST00000543627 CASC2Q6XLA1 102 aa5.58□□□□□ -1.52
DDB1-222ENST00000543627 FLGP20930 4061 aaPredicted RBP5.56□□□□□ -1.52
DDB1-222ENST00000543627 C5orf47Q569G3 176 aa5.56□□□□□ -1.52
DDB1-222ENST00000543627 HCG22E2RYF7 251 aa5.55□□□□□ -1.52
DDB1-222ENST00000543627 LORP23490 312 aaPredicted RBP5.55□□□□□ -1.52
DDB1-222ENST00000543627 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
DDB1-222ENST00000543627 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
DDB1-222ENST00000543627 MPLKIPQ8TAP9 179 aa5.51□□□□□ -1.53
DDB1-222ENST00000543627 SCGB1A1P11684 91 aa5.5□□□□□ -1.53
DDB1-222ENST00000543627 Q5W150 140 aa5.5□□□□□ -1.53
DDB1-222ENST00000543627 SEC61GP60059 68 aa5.48□□□□□ -1.53
DDB1-222ENST00000543627 CXCL6P80162 114 aa5.45□□□□□ -1.54
DDB1-222ENST00000543627 C7orf65Q6ZTY9 151 aa5.45□□□□□ -1.54
DDB1-222ENST00000543627 ACYP1P07311 99 aa5.43□□□□□ -1.54
DDB1-222ENST00000543627 HIST1H4AP62805 103 aaKnown RBP5.42□□□□□ -1.54
DDB1-222ENST00000543627 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
DDB1-222ENST00000543627 C4orf26Q17RF5 130 aa5.4□□□□□ -1.54
DDB1-222ENST00000543627 KRTAP9-8Q9BYQ0 159 aa5.4□□□□□ -1.54
DDB1-222ENST00000543627 H1FX-AS1Q4G0G2 97 aa5.39□□□□□ -1.55
DDB1-222ENST00000543627 KRTAP10-10P60014 251 aa5.38□□□□□ -1.55
DDB1-222ENST00000543627 TP53AIP1Q9HCN2 124 aa5.38□□□□□ -1.55
DDB1-222ENST00000543627 FAM240AA0A1B0GVK7 77 aa5.36□□□□□ -1.55
DDB1-222ENST00000543627 MT2AP02795 61 aa5.36□□□□□ -1.55
DDB1-222ENST00000543627 ATP5EP2Q5VTU8 51 aa5.34□□□□□ -1.55
DDB1-222ENST00000543627 K7ERU9 68 aa5.33□□□□□ -1.56
DDB1-222ENST00000543627 MT1FP04733 61 aa5.33□□□□□ -1.56
DDB1-222ENST00000543627 A0A087WVE0 104 aa5.32□□□□□ -1.56
DDB1-222ENST00000543627 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
DDB1-222ENST00000543627 LINC00643Q86TS7 51 aa5.32□□□□□ -1.56
DDB1-222ENST00000543627 SMIM20Q8N5G0 67 aa5.3□□□□□ -1.56
DDB1-222ENST00000543627 C1orf64Q8NEQ6 169 aa5.3□□□□□ -1.56
DDB1-222ENST00000543627 J3QR89 54 aa5.29□□□□□ -1.56
DDB1-222ENST00000543627 TRAV22A0A0B4J277 110 aa5.28□□□□□ -1.56
DDB1-222ENST00000543627 CYP4F30PQ9H0H9 118 aa5.27□□□□□ -1.57
DDB1-222ENST00000543627 V9GYY9 64 aa5.27□□□□□ -1.57
DDB1-222ENST00000543627 H0Y9P7 68 aa5.26□□□□□ -1.57
DDB1-222ENST00000543627 UQCRQO14949 82 aa5.26□□□□□ -1.57
DDB1-222ENST00000543627 KRTAP3-1Q9BYR8 98 aa5.25□□□□□ -1.57
DDB1-222ENST00000543627 S4R3F8 94 aa5.25□□□□□ -1.57
DDB1-222ENST00000543627 LOC101927531A0A1B0GV80 90 aa5.24□□□□□ -1.57
DDB1-222ENST00000543627 KRTAP9-3Q9BYQ3 159 aa5.23□□□□□ -1.57
DDB1-222ENST00000543627 ATOX1O00244 68 aa5.21□□□□□ -1.58
DDB1-222ENST00000543627 FAM236AA0A1B0GUQ0 79 aa5.2□□□□□ -1.58
DDB1-222ENST00000543627 FAM236BA0A1B0GV22 79 aa5.2□□□□□ -1.58
DDB1-222ENST00000543627 LCE2BO14633 110 aa5.2□□□□□ -1.58
DDB1-222ENST00000543627 LCA10Q71F78 164 aa5.2□□□□□ -1.58
DDB1-222ENST00000543627 LINC00208Q96KT6 92 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms