RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 DNAH5Q8TE73 4624 aa10.95□□□□□ -0.66
COPS7A-215ENST00000543155 ALMS1Q8TCU4 4167 aa10.94□□□□□ -0.66
COPS7A-215ENST00000543155 DNAH11Q96DT5 4516 aa10.93□□□□□ -0.66
COPS7A-215ENST00000543155 A0A087X002 238 aa10.93□□□□□ -0.66
COPS7A-215ENST00000543155 SPINK6Q6UWN8 80 aa10.93□□□□□ -0.66
COPS7A-215ENST00000543155 NOTCH2NLQ7Z3S9 236 aa10.93□□□□□ -0.66
COPS7A-215ENST00000543155 IGLV7-46A0A075B6I9 117 aa10.91□□□□□ -0.66
COPS7A-215ENST00000543155 Q6ZSA8 131 aa10.91□□□□□ -0.66
COPS7A-215ENST00000543155 PCOTHQ58A44 107 aa10.88□□□□□ -0.67
COPS7A-215ENST00000543155 KRTAP10-1P60331 282 aa10.88□□□□□ -0.67
COPS7A-215ENST00000543155 BRK1Q8WUW1 75 aa10.87□□□□□ -0.67
COPS7A-215ENST00000543155 V9GYY9 64 aa10.87□□□□□ -0.67
COPS7A-215ENST00000543155 C8orf87E5RJ46 101 aa10.84□□□□□ -0.67
COPS7A-215ENST00000543155 PKD1P98161 4303 aa10.83□□□□□ -0.68
COPS7A-215ENST00000543155 KRTAP13-2Q52LG2 175 aa10.82□□□□□ -0.68
COPS7A-215ENST00000543155 COA5Q86WW8 74 aa10.82□□□□□ -0.68
COPS7A-215ENST00000543155 PSPHP1O15172 72 aa10.8□□□□□ -0.68
COPS7A-215ENST00000543155 LOC101927531A0A1B0GV80 90 aa10.79□□□□□ -0.68
COPS7A-215ENST00000543155 C1orf195Q5TG92 126 aa10.79□□□□□ -0.68
COPS7A-215ENST00000543155 FAT2Q9NYQ8 4349 aa10.77□□□□□ -0.68
COPS7A-215ENST00000543155 KRTAP13-3Q3SY46 172 aa10.77□□□□□ -0.69
COPS7A-215ENST00000543155 Q5W150 140 aa10.76□□□□□ -0.69
COPS7A-215ENST00000543155 Q8N9P0 234 aaPredicted RBP10.76□□□□□ -0.69
COPS7A-215ENST00000543155 LIMD2Q9BT23 127 aa10.74□□□□□ -0.69
COPS7A-215ENST00000543155 A8MUN3 132 aa10.73□□□□□ -0.69
COPS7A-215ENST00000543155 LINC00313P59037 77 aa10.73□□□□□ -0.69
COPS7A-215ENST00000543155 LRP1BQ9NZR2 4599 aa10.73□□□□□ -0.69
COPS7A-215ENST00000543155 KRTAP1-4P0C5Y4 121 aa10.73□□□□□ -0.69
COPS7A-215ENST00000543155 HYDINQ4G0P3 5121 aa10.7□□□□□ -0.7
COPS7A-215ENST00000543155 Q5VV11 94 aa10.69□□□□□ -0.7
COPS7A-215ENST00000543155 KRTAP21-3Q3LHN1 58 aa10.68□□□□□ -0.7
COPS7A-215ENST00000543155 HRES1P13985 223 aa10.66□□□□□ -0.7
COPS7A-215ENST00000543155 FAM229AH3BQW9 127 aa10.66□□□□□ -0.7
COPS7A-215ENST00000543155 PRR15LQ9BU68 103 aa10.66□□□□□ -0.7
COPS7A-215ENST00000543155 PLA2G1BP04054 148 aaKnown RBP10.61□□□□□ -0.71
COPS7A-215ENST00000543155 KRTAP16-1A8MUX0 517 aa10.61□□□□□ -0.71
COPS7A-215ENST00000543155 C4orf48Q5BLP8 95 aa10.6□□□□□ -0.71
COPS7A-215ENST00000543155 TYMSOSQ8TAI1 123 aa10.6□□□□□ -0.71
COPS7A-215ENST00000543155 CHKB-CPT1BH3BT56 60 aa10.58□□□□□ -0.72
COPS7A-215ENST00000543155 Q75L30 129 aa10.57□□□□□ -0.72
COPS7A-215ENST00000543155 VPS13BQ7Z7G8 4022 aa10.57□□□□□ -0.72
COPS7A-215ENST00000543155 LINC01558Q9Y6Z2 57 aa10.57□□□□□ -0.72
COPS7A-215ENST00000543155 SPINK1P00995 79 aa10.56□□□□□ -0.72
COPS7A-215ENST00000543155 SPAG11AQ6PDA7 123 aa10.55□□□□□ -0.72
COPS7A-215ENST00000543155 RETNLBQ9BQ08 111 aa10.55□□□□□ -0.72
COPS7A-215ENST00000543155 IGKV2-30P06310 120 aa10.55□□□□□ -0.72
COPS7A-215ENST00000543155 ACYP2P14621 99 aa10.53□□□□□ -0.72
COPS7A-215ENST00000543155 DMAC1Q96GE9 116 aa10.51□□□□□ -0.73
COPS7A-215ENST00000543155 RPS29P62273 56 aaKnown RBP10.46□□□□□ -0.73
COPS7A-215ENST00000543155 LINC00304Q8N9R0 145 aa10.46□□□□□ -0.73
COPS7A-215ENST00000543155 SACSQ9NZJ4 4579 aa10.45□□□□□ -0.74
COPS7A-215ENST00000543155 PRR26Q8N8Z3 221 aa10.45□□□□□ -0.74
COPS7A-215ENST00000543155 A6NED7 52 aa10.45□□□□□ -0.74
COPS7A-215ENST00000543155 A8MU10 97 aa10.42□□□□□ -0.74
COPS7A-215ENST00000543155 PKHD1P08F94 4074 aa10.4□□□□□ -0.74
COPS7A-215ENST00000543155 IGKV2D-30A0A075B6S6 120 aa10.4□□□□□ -0.74
COPS7A-215ENST00000543155 SMR3BP02814 79 aaPredicted RBP10.38□□□□□ -0.75
COPS7A-215ENST00000543155 A0A1B0GVY2 172 aa10.37□□□□□ -0.75
COPS7A-215ENST00000543155 LCA10Q71F78 164 aa10.37□□□□□ -0.75
COPS7A-215ENST00000543155 DYNC1H1Q14204 4646 aaKnown RBP10.36□□□□□ -0.75
COPS7A-215ENST00000543155 CDC42SE1Q9NRR8 79 aa10.34□□□□□ -0.75
COPS7A-215ENST00000543155 SPINK7P58062 85 aa10.3□□□□□ -0.76
COPS7A-215ENST00000543155 KRTAP10-4P60372 401 aaPredicted RBP10.3□□□□□ -0.76
COPS7A-215ENST00000543155 ATP11AUNQ6ZP68 121 aa10.3□□□□□ -0.76
COPS7A-215ENST00000543155 C7orf65Q6ZTY9 151 aa10.28□□□□□ -0.76
COPS7A-215ENST00000543155 PMAIP1Q13794 54 aa10.27□□□□□ -0.77
COPS7A-215ENST00000543155 SPTSSBQ8NFR3 76 aa10.26□□□□□ -0.77
COPS7A-215ENST00000543155 APOBP04114 4563 aaKnown RBP10.25□□□□□ -0.77
COPS7A-215ENST00000543155 PKHD1L1Q86WI1 4243 aa10.23□□□□□ -0.77
COPS7A-215ENST00000543155 A0A1B0GU69 56 aa10.2□□□□□ -0.78
COPS7A-215ENST00000543155 C9orf92A6NGG3 77 aa10.18□□□□□ -0.78
COPS7A-215ENST00000543155 A8MUU9 505 aa10.18□□□□□ -0.78
COPS7A-215ENST00000543155 C20orf166-AS1Q96NR2 134 aa10.18□□□□□ -0.78
COPS7A-215ENST00000543155 FAT1Q14517 4588 aa10.16□□□□□ -0.78
COPS7A-215ENST00000543155 A6NN06 94 aa10.12□□□□□ -0.79
COPS7A-215ENST00000543155 Q8N1X5 172 aa10.12□□□□□ -0.79
COPS7A-215ENST00000543155 RYR2Q92736 4967 aa10.12□□□□□ -0.79
COPS7A-215ENST00000543155 KTN1-AS1Q86SY8 53 aa10.05□□□□□ -0.8
COPS7A-215ENST00000543155 SPATA8Q6RVD6 105 aa10.01□□□□□ -0.81
COPS7A-215ENST00000543155 UQCR11O14957 56 aa10□□□□□ -0.81
COPS7A-215ENST00000543155 MIR22HGQ0VDD5 57 aa9.97□□□□□ -0.81
COPS7A-215ENST00000543155 SEC61GP60059 68 aa9.93□□□□□ -0.82
COPS7A-215ENST00000543155 FLG2Q5D862 2391 aaPredicted RBP9.92□□□□□ -0.82
COPS7A-215ENST00000543155 KRTAP3-1Q9BYR8 98 aa9.92□□□□□ -0.82
COPS7A-215ENST00000543155 KMT2CQ8NEZ4 4911 aaKnown RBP9.92□□□□□ -0.82
COPS7A-215ENST00000543155 KRTAP10-8P60410 259 aa9.91□□□□□ -0.82
COPS7A-215ENST00000543155 Q5VSD8 79 aa9.89□□□□□ -0.83
COPS7A-215ENST00000543155 FAT3Q8TDW7 4589 aa9.88□□□□□ -0.83
COPS7A-215ENST00000543155 TNXBP22105 4242 aa9.86□□□□□ -0.83
COPS7A-215ENST00000543155 COX6B2Q6YFQ2 88 aa9.83□□□□□ -0.84
COPS7A-215ENST00000543155 HSPG2P98160 4391 aa9.8□□□□□ -0.84
COPS7A-215ENST00000543155 LRP1Q07954 4544 aaKnown RBP9.78□□□□□ -0.84
COPS7A-215ENST00000543155 RPL37P61927 97 aaKnown RBP9.76□□□□□ -0.85
COPS7A-215ENST00000543155 RBM12B-AS1Q9P1G2 102 aa9.72□□□□□ -0.85
COPS7A-215ENST00000543155 XP32Q5T750 250 aa9.7□□□□□ -0.86
COPS7A-215ENST00000543155 RYR1P21817 5038 aa9.67□□□□□ -0.86
COPS7A-215ENST00000543155 A0A1B0GU33 70 aa9.67□□□□□ -0.86
COPS7A-215ENST00000543155 H0YAA0 97 aa9.67□□□□□ -0.86
COPS7A-215ENST00000543155 H1FX-AS1Q4G0G2 97 aa9.66□□□□□ -0.86
COPS7A-215ENST00000543155 KRTAP17-1Q9BYP8 105 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms