RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 PLECQ15149 4684 aaKnown RBP7.7□□□□□ -1.18
DDX11-223ENST00000542838 NUPR2A6NF83 97 aa7.69□□□□□ -1.18
DDX11-223ENST00000542838 HRES1P13985 223 aa7.69□□□□□ -1.18
DDX11-223ENST00000542838 A0A087WTM6 91 aa7.69□□□□□ -1.18
DDX11-223ENST00000542838 ZNF861PO60384 105 aa7.67□□□□□ -1.18
DDX11-223ENST00000542838 SPINK6Q6UWN8 80 aa7.67□□□□□ -1.18
DDX11-223ENST00000542838 ATP11AUNQ6ZP68 121 aa7.67□□□□□ -1.18
DDX11-223ENST00000542838 RTL8CO15255 209 aa7.67□□□□□ -1.18
DDX11-223ENST00000542838 PLAC8Q9NZF1 115 aa7.66□□□□□ -1.18
DDX11-223ENST00000542838 CDC42SE1Q9NRR8 79 aa7.65□□□□□ -1.18
DDX11-223ENST00000542838 Q5W150 140 aa7.63□□□□□ -1.19
DDX11-223ENST00000542838 DNAH8Q96JB1 4490 aa7.63□□□□□ -1.19
DDX11-223ENST00000542838 KTN1-AS1Q86SY8 53 aa7.61□□□□□ -1.19
DDX11-223ENST00000542838 CIRBP-AS1Q8TBR5 109 aa7.6□□□□□ -1.19
DDX11-223ENST00000542838 SPINK7P58062 85 aa7.6□□□□□ -1.19
DDX11-223ENST00000542838 FRAS1Q86XX4 4008 aa7.59□□□□□ -1.19
DDX11-223ENST00000542838 PRR26Q8N8Z3 221 aa7.59□□□□□ -1.19
DDX11-223ENST00000542838 KRTAP13-3Q3SY46 172 aa7.58□□□□□ -1.2
DDX11-223ENST00000542838 A6NN06 94 aa7.58□□□□□ -1.2
DDX11-223ENST00000542838 HECTD4Q9Y4D8 3996 aa7.58□□□□□ -1.2
DDX11-223ENST00000542838 VPS13DQ5THJ4 4388 aa7.57□□□□□ -1.2
DDX11-223ENST00000542838 IGLV7-43P04211 117 aa7.56□□□□□ -1.2
DDX11-223ENST00000542838 ACYP2P14621 99 aa7.55□□□□□ -1.2
DDX11-223ENST00000542838 C8orf87E5RJ46 101 aa7.53□□□□□ -1.2
DDX11-223ENST00000542838 STARD9Q9P2P6 4700 aa7.53□□□□□ -1.2
DDX11-223ENST00000542838 DNAH17Q9UFH2 4485 aa7.52□□□□□ -1.2
DDX11-223ENST00000542838 SSBP3-AS1Q7Z2R9 100 aa7.51□□□□□ -1.21
DDX11-223ENST00000542838 RETNLBQ9BQ08 111 aa7.5□□□□□ -1.21
DDX11-223ENST00000542838 LINC00313P59037 77 aa7.49□□□□□ -1.21
DDX11-223ENST00000542838 DNAH2Q9P225 4427 aa7.49□□□□□ -1.21
DDX11-223ENST00000542838 DMAC1Q96GE9 116 aa7.48□□□□□ -1.21
DDX11-223ENST00000542838 RBM12B-AS1Q9P1G2 102 aa7.48□□□□□ -1.21
DDX11-223ENST00000542838 C1orf134Q5TEV5 83 aa7.47□□□□□ -1.21
DDX11-223ENST00000542838 KMT2AQ03164 3969 aa7.47□□□□□ -1.21
DDX11-223ENST00000542838 ALMS1Q8TCU4 4167 aa7.47□□□□□ -1.21
DDX11-223ENST00000542838 FAM229AH3BQW9 127 aa7.47□□□□□ -1.21
DDX11-223ENST00000542838 C7orf65Q6ZTY9 151 aa7.46□□□□□ -1.21
DDX11-223ENST00000542838 PRKDCP78527 4128 aaKnown RBP7.44□□□□□ -1.22
DDX11-223ENST00000542838 IGKV2-30P06310 120 aa7.43□□□□□ -1.22
DDX11-223ENST00000542838 FBN3Q75N90 2809 aa7.43□□□□□ -1.22
DDX11-223ENST00000542838 MEGF8Q7Z7M0 2845 aa7.41□□□□□ -1.22
DDX11-223ENST00000542838 A0A1B0GU69 56 aa7.4□□□□□ -1.22
DDX11-223ENST00000542838 KRTAP13-2Q52LG2 175 aa7.4□□□□□ -1.22
DDX11-223ENST00000542838 TGP01266 2768 aa7.39□□□□□ -1.23
DDX11-223ENST00000542838 LY6G6CO95867 125 aa7.37□□□□□ -1.23
DDX11-223ENST00000542838 KRTAP16-1A8MUX0 517 aa7.36□□□□□ -1.23
DDX11-223ENST00000542838 KRTAP10-2P60368 255 aa7.36□□□□□ -1.23
DDX11-223ENST00000542838 DNAH11Q96DT5 4516 aa7.35□□□□□ -1.23
DDX11-223ENST00000542838 IGKV2D-30A0A075B6S6 120 aa7.35□□□□□ -1.23
DDX11-223ENST00000542838 DNAH6Q9C0G6 4158 aa7.34□□□□□ -1.24
DDX11-223ENST00000542838 SPATA8Q6RVD6 105 aa7.31□□□□□ -1.24
DDX11-223ENST00000542838 DNAH5Q8TE73 4624 aa7.31□□□□□ -1.24
DDX11-223ENST00000542838 UQCR11O14957 56 aa7.29□□□□□ -1.24
DDX11-223ENST00000542838 MIR22HGQ0VDD5 57 aa7.29□□□□□ -1.24
DDX11-223ENST00000542838 PRAC1Q96KF2 57 aa7.28□□□□□ -1.24
DDX11-223ENST00000542838 KRTAP1-4P0C5Y4 121 aa7.27□□□□□ -1.25
DDX11-223ENST00000542838 KRTAP10-1P60331 282 aa7.27□□□□□ -1.25
DDX11-223ENST00000542838 Q6ZSA8 131 aa7.25□□□□□ -1.25
DDX11-223ENST00000542838 ADM2Q7Z4H4 148 aa7.25□□□□□ -1.25
DDX11-223ENST00000542838 PLA2G1BP04054 148 aaKnown RBP7.24□□□□□ -1.25
DDX11-223ENST00000542838 LRP1BQ9NZR2 4599 aa7.23□□□□□ -1.25
DDX11-223ENST00000542838 TYMSOSQ8TAI1 123 aa7.21□□□□□ -1.25
DDX11-223ENST00000542838 SPINK1P00995 79 aa7.2□□□□□ -1.26
DDX11-223ENST00000542838 Q8N1X5 172 aa7.18□□□□□ -1.26
DDX11-223ENST00000542838 PKD1P98161 4303 aa7.16□□□□□ -1.26
DDX11-223ENST00000542838 H3BS24 57 aa7.14□□□□□ -1.27
DDX11-223ENST00000542838 VPS13BQ7Z7G8 4022 aa7.13□□□□□ -1.27
DDX11-223ENST00000542838 LINC00304Q8N9R0 145 aa7.1□□□□□ -1.27
DDX11-223ENST00000542838 FAT2Q9NYQ8 4349 aa7.09□□□□□ -1.27
DDX11-223ENST00000542838 LINC01554Q52M75 96 aa7.08□□□□□ -1.28
DDX11-223ENST00000542838 J3QL48 77 aa7.06□□□□□ -1.28
DDX11-223ENST00000542838 HYDINQ4G0P3 5121 aa7.05□□□□□ -1.28
DDX11-223ENST00000542838 RPS29P62273 56 aaKnown RBP7.04□□□□□ -1.28
DDX11-223ENST00000542838 CSAG1Q6PB30 78 aa7.04□□□□□ -1.28
DDX11-223ENST00000542838 C9orf92A6NGG3 77 aa7.03□□□□□ -1.28
DDX11-223ENST00000542838 DNHD1Q96M86 4753 aa7.03□□□□□ -1.28
DDX11-223ENST00000542838 H0YAA0 97 aa6.99□□□□□ -1.29
DDX11-223ENST00000542838 A8MUU9 505 aa6.99□□□□□ -1.29
DDX11-223ENST00000542838 C20orf166-AS1Q96NR2 134 aa6.98□□□□□ -1.29
DDX11-223ENST00000542838 KRTAP3-1Q9BYR8 98 aa6.97□□□□□ -1.29
DDX11-223ENST00000542838 SMR3BP02814 79 aaPredicted RBP6.96□□□□□ -1.29
DDX11-223ENST00000542838 SACSQ9NZJ4 4579 aa6.95□□□□□ -1.3
DDX11-223ENST00000542838 A0A1B0GU33 70 aa6.95□□□□□ -1.3
DDX11-223ENST00000542838 H1FX-AS1Q4G0G2 97 aa6.92□□□□□ -1.3
DDX11-223ENST00000542838 PKHD1P08F94 4074 aa6.89□□□□□ -1.31
DDX11-223ENST00000542838 PKHD1L1Q86WI1 4243 aa6.84□□□□□ -1.31
DDX11-223ENST00000542838 COX6B2Q6YFQ2 88 aa6.84□□□□□ -1.31
DDX11-223ENST00000542838 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
DDX11-223ENST00000542838 DYNC1H1Q14204 4646 aaKnown RBP6.81□□□□□ -1.32
DDX11-223ENST00000542838 KRTAP10-4P60372 401 aaPredicted RBP6.8□□□□□ -1.32
DDX11-223ENST00000542838 FAT1Q14517 4588 aa6.8□□□□□ -1.32
DDX11-223ENST00000542838 APOBP04114 4563 aaKnown RBP6.79□□□□□ -1.32
DDX11-223ENST00000542838 FLG2Q5D862 2391 aaPredicted RBP6.78□□□□□ -1.32
DDX11-223ENST00000542838 K7ERS5 55 aa6.78□□□□□ -1.32
DDX11-223ENST00000542838 A0A1B0GVY2 172 aa6.73□□□□□ -1.33
DDX11-223ENST00000542838 CRIPTQ9P021 101 aa6.72□□□□□ -1.33
DDX11-223ENST00000542838 KRTAP10-6P60371 365 aaPredicted RBP6.66□□□□□ -1.34
DDX11-223ENST00000542838 KRTAP3-3Q9BYR6 98 aa6.66□□□□□ -1.34
DDX11-223ENST00000542838 RPL37P61927 97 aaKnown RBP6.65□□□□□ -1.35
DDX11-223ENST00000542838 ROMO1P60602 79 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms