RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 RGPD3A6NKT7 1758 aaPredicted RBP-1.03□□□□□ -2.58
KNTC1-213ENST00000542727 RGPD4Q7Z3J3 1758 aa-1.03□□□□□ -2.58
KNTC1-213ENST00000542727 NESP48681 1621 aa-1.04□□□□□ -2.58
KNTC1-213ENST00000542727 CCNB3Q8WWL7 1395 aa-1.04□□□□□ -2.58
KNTC1-213ENST00000542727 SNRPFP62306 86 aaKnown RBP-1.04□□□□□ -2.58
KNTC1-213ENST00000542727 LINC00643Q86TS7 51 aa-1.04□□□□□ -2.58
KNTC1-213ENST00000542727 RABAC1Q9UI14 185 aa-1.04□□□□□ -2.58
KNTC1-213ENST00000542727 CEP250Q9BV73 2442 aa-1.04□□□□□ -2.58
KNTC1-213ENST00000542727 MGAQ8IWI9 3026 aa-1.04□□□□□ -2.58
KNTC1-213ENST00000542727 SCN11AQ9UI33 1791 aa-1.04□□□□□ -2.58
KNTC1-213ENST00000542727 RGPD1P0DJD0 1748 aa-1.04□□□□□ -2.58
KNTC1-213ENST00000542727 TIAM2Q8IVF5 1701 aa-1.04□□□□□ -2.58
KNTC1-213ENST00000542727 URB2Q14146 1524 aaKnown RBP-1.05□□□□□ -2.58
KNTC1-213ENST00000542727 NCOA2Q15596 1464 aa-1.05□□□□□ -2.58
KNTC1-213ENST00000542727 DMDP11532 3685 aa-1.05□□□□□ -2.58
KNTC1-213ENST00000542727 CEP350Q5VT06 3117 aa-1.05□□□□□ -2.58
KNTC1-213ENST00000542727 NDUFA4O00483 81 aa-1.05□□□□□ -2.58
KNTC1-213ENST00000542727 MRPL33O75394 65 aaKnown RBP-1.05□□□□□ -2.58
KNTC1-213ENST00000542727 LOC400499M0QZD8 3231 aa-1.05□□□□□ -2.58
KNTC1-213ENST00000542727 ABCC10Q5T3U5 1492 aa-1.05□□□□□ -2.58
KNTC1-213ENST00000542727 DCHS1Q96JQ0 3298 aa-1.06□□□□□ -2.58
KNTC1-213ENST00000542727 SUPT6HQ7KZ85 1726 aaKnown RBP-1.06□□□□□ -2.58
KNTC1-213ENST00000542727 MMP24-AS1A0A0U1RRL7 71 aa-1.06□□□□□ -2.58
KNTC1-213ENST00000542727 CEP162Q5TB80 1403 aa-1.06□□□□□ -2.58
KNTC1-213ENST00000542727 MYO3AQ8NEV4 1616 aa-1.07□□□□□ -2.58
KNTC1-213ENST00000542727 EP400Q96L91 3159 aa-1.07□□□□□ -2.58
KNTC1-213ENST00000542727 TNP1P09430 55 aa-1.07□□□□□ -2.58
KNTC1-213ENST00000542727 HMGA1P17096 107 aaKnown RBP-1.07□□□□□ -2.58
KNTC1-213ENST00000542727 RPS29P62273 56 aaKnown RBP-1.07□□□□□ -2.58
KNTC1-213ENST00000542727 PYY3Q5JQD4 70 aa-1.07□□□□□ -2.58
KNTC1-213ENST00000542727 CCDC88BA6NC98 1476 aa-1.07□□□□□ -2.58
KNTC1-213ENST00000542727 SPTBN5Q9NRC6 3674 aaKnown RBP-1.07□□□□□ -2.58
KNTC1-213ENST00000542727 CFAP54Q96N23 3096 aa-1.07□□□□□ -2.58
KNTC1-213ENST00000542727 WDFY4Q6ZS81 3184 aa-1.08□□□□□ -2.58
KNTC1-213ENST00000542727 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.08□□□□□ -2.58
KNTC1-213ENST00000542727 POLR1AO95602 1720 aaPredicted RBP-1.08□□□□□ -2.58
KNTC1-213ENST00000542727 DEFB131BA0A096LNP1 70 aa-1.08□□□□□ -2.58
KNTC1-213ENST00000542727 DEFB4AO15263 64 aa-1.08□□□□□ -2.58
KNTC1-213ENST00000542727 Q9H521 79 aa-1.08□□□□□ -2.58
KNTC1-213ENST00000542727 PVALEFA0A1B0GWK0 134 aa-1.09□□□□□ -2.58
KNTC1-213ENST00000542727 S100A16Q96FQ6 103 aaKnown RBP-1.09□□□□□ -2.58
KNTC1-213ENST00000542727 LTN1O94822 1766 aa-1.09□□□□□ -2.58
KNTC1-213ENST00000542727 PKIAP61925 76 aa-1.1□□□□□ -2.59
KNTC1-213ENST00000542727 WT1-ASQ06250 92 aa-1.1□□□□□ -2.59
KNTC1-213ENST00000542727 NREPQ16612 68 aa-1.1□□□□□ -2.59
KNTC1-213ENST00000542727 ATP5EP2Q5VTU8 51 aa-1.1□□□□□ -2.59
KNTC1-213ENST00000542727 SNHG12Q9BXW3 62 aa-1.1□□□□□ -2.59
KNTC1-213ENST00000542727 THOC2Q8NI27 1593 aaKnown RBP-1.1□□□□□ -2.59
KNTC1-213ENST00000542727 DIP2BQ9P265 1576 aa-1.1□□□□□ -2.59
KNTC1-213ENST00000542727 WDFY3Q8IZQ1 3526 aa-1.1□□□□□ -2.59
KNTC1-213ENST00000542727 MUC3AQ02505 3323 aa-1.11□□□□□ -2.59
KNTC1-213ENST00000542727 DOT1LQ8TEK3 1739 aa-1.11□□□□□ -2.59
KNTC1-213ENST00000542727 IGLV5-48A0A075B6I7 105 aa-1.11□□□□□ -2.59
KNTC1-213ENST00000542727 A0A087WXM4 84 aa-1.11□□□□□ -2.59
KNTC1-213ENST00000542727 KANTRA0A1W2PQU2 76 aa-1.11□□□□□ -2.59
KNTC1-213ENST00000542727 S100A8P05109 93 aa-1.11□□□□□ -2.59
KNTC1-213ENST00000542727 BVES-AS1Q5T3Y7 98 aa-1.11□□□□□ -2.59
KNTC1-213ENST00000542727 NOP10Q9NPE3 64 aaKnown RBP-1.12□□□□□ -2.59
KNTC1-213ENST00000542727 VPS8Q8N3P4 1428 aa-1.13□□□□□ -2.59
KNTC1-213ENST00000542727 H3BUA1 57 aa-1.13□□□□□ -2.59
KNTC1-213ENST00000542727 UBL5Q9BZL1 73 aa-1.13□□□□□ -2.59
KNTC1-213ENST00000542727 HFM1A2PYH4 1435 aa-1.14□□□□□ -2.59
KNTC1-213ENST00000542727 MKI67P46013 3256 aaKnown RBP-1.14□□□□□ -2.59
KNTC1-213ENST00000542727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.14□□□□□ -2.59
KNTC1-213ENST00000542727 KIAA0586Q9BVV6 1533 aa-1.14□□□□□ -2.59
KNTC1-213ENST00000542727 FRYLO94915 3013 aa-1.14□□□□□ -2.59
KNTC1-213ENST00000542727 MINOS1Q5TGZ0 78 aa-1.14□□□□□ -2.59
KNTC1-213ENST00000542727 V9GYS6 101 aa-1.14□□□□□ -2.59
KNTC1-213ENST00000542727 VCANP13611 3396 aa-1.15□□□□□ -2.59
KNTC1-213ENST00000542727 DDX60LQ5H9U9 1706 aaKnown RBP-1.15□□□□□ -2.59
KNTC1-213ENST00000542727 ZNF831Q5JPB2 1677 aa-1.16□□□□□ -2.59
KNTC1-213ENST00000542727 USP34Q70CQ2 3546 aa-1.16□□□□□ -2.59
KNTC1-213ENST00000542727 CDC42BPAQ5VT25 1732 aa-1.16□□□□□ -2.6
KNTC1-213ENST00000542727 TOGARAM1Q9Y4F4 1720 aa-1.16□□□□□ -2.6
KNTC1-213ENST00000542727 UBR1Q8IWV7 1749 aa-1.17□□□□□ -2.6
KNTC1-213ENST00000542727 PIK3C2BO00750 1634 aa-1.17□□□□□ -2.6
KNTC1-213ENST00000542727 PCNTO95613 3336 aa-1.17□□□□□ -2.6
KNTC1-213ENST00000542727 SMIM13P0DJ93 91 aa-1.17□□□□□ -2.6
KNTC1-213ENST00000542727 KCNQ1DNQ9H478 68 aa-1.17□□□□□ -2.6
KNTC1-213ENST00000542727 ASXL1Q8IXJ9 1541 aa-1.17□□□□□ -2.6
KNTC1-213ENST00000542727 ANKRD36CQ5JPF3 1778 aa-1.17□□□□□ -2.6
KNTC1-213ENST00000542727 ARFGEF2Q9Y6D5 1785 aa-1.17□□□□□ -2.6
KNTC1-213ENST00000542727 VPS13CQ709C8 3753 aa-1.18□□□□□ -2.6
KNTC1-213ENST00000542727 RALGAPBQ86X10 1494 aa-1.18□□□□□ -2.6
KNTC1-213ENST00000542727 TMEM131LA2VDJ0 1609 aa-1.18□□□□□ -2.6
KNTC1-213ENST00000542727 FCER1GP30273 86 aa-1.18□□□□□ -2.6
KNTC1-213ENST00000542727 RPS27P42677 84 aaKnown RBP-1.18□□□□□ -2.6
KNTC1-213ENST00000542727 CRIP1P50238 77 aa-1.18□□□□□ -2.6
KNTC1-213ENST00000542727 RPS27LQ71UM5 84 aaKnown RBP-1.18□□□□□ -2.6
KNTC1-213ENST00000542727 SZT2Q5T011 3432 aa-1.18□□□□□ -2.6
KNTC1-213ENST00000542727 ARHGAP35Q9NRY4 1499 aa-1.18□□□□□ -2.6
KNTC1-213ENST00000542727 ABCC3O15438 1527 aa-1.19□□□□□ -2.6
KNTC1-213ENST00000542727 ITSN1Q15811 1721 aa-1.19□□□□□ -2.6
KNTC1-213ENST00000542727 PARP4Q9UKK3 1724 aaKnown RBP-1.19□□□□□ -2.6
KNTC1-213ENST00000542727 ANKRD26Q9UPS8 1709 aa-1.19□□□□□ -2.6
KNTC1-213ENST00000542727 CFAP47Q6ZTR5 3102 aa-1.19□□□□□ -2.6
KNTC1-213ENST00000542727 AKAP12Q02952 1782 aa-1.2□□□□□ -2.6
KNTC1-213ENST00000542727 DEFB136Q30KP8 78 aa-1.2□□□□□ -2.6
KNTC1-213ENST00000542727 C6orf48Q9UBA6 75 aa-1.2□□□□□ -2.6
KNTC1-213ENST00000542727 KIF14Q15058 1648 aa-1.2□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 316.3 ms