RNA–Protein interactions for RNA: ENST00000542260.1

SCNN1A-217, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 601 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-217ENST00000542260 Q6Q795 121 aa8.06□□□□□ -1.12
SCNN1A-217ENST00000542260 PDE6GP18545 87 aa8.04□□□□□ -1.12
SCNN1A-217ENST00000542260 C21orf62-AS1Q17RA5 79 aa8.04□□□□□ -1.12
SCNN1A-217ENST00000542260 C14orf132Q9NPU4 83 aa8.04□□□□□ -1.12
SCNN1A-217ENST00000542260 SS18L2Q9UHA2 77 aa8.04□□□□□ -1.12
SCNN1A-217ENST00000542260 LOC110117498A0A087WWA1 95 aa8.01□□□□□ -1.13
SCNN1A-217ENST00000542260 TRBV7-4A0A0J9YYF1 115 aa8.01□□□□□ -1.13
SCNN1A-217ENST00000542260 Q96NJ1 140 aa8.01□□□□□ -1.13
SCNN1A-217ENST00000542260 J3QR89 54 aa7.98□□□□□ -1.13
SCNN1A-217ENST00000542260 Q6ZQT0 140 aa7.98□□□□□ -1.13
SCNN1A-217ENST00000542260 VPS25Q9BRG1 176 aa7.98□□□□□ -1.13
SCNN1A-217ENST00000542260 CCKP06307 115 aa7.97□□□□□ -1.13
SCNN1A-217ENST00000542260 C20orf166-AS1Q96NR2 134 aa7.96□□□□□ -1.14
SCNN1A-217ENST00000542260 A0A1B0GW54 56 aa7.92□□□□□ -1.14
SCNN1A-217ENST00000542260 A0A1W2PNM2 257 aa7.92□□□□□ -1.14
SCNN1A-217ENST00000542260 A8MUU9 505 aa7.92□□□□□ -1.14
SCNN1A-217ENST00000542260 K7ERU9 68 aa7.92□□□□□ -1.14
SCNN1A-217ENST00000542260 A0A087WSZ3 146 aa7.91□□□□□ -1.14
SCNN1A-217ENST00000542260 ACYP1P07311 99 aa7.9□□□□□ -1.14
SCNN1A-217ENST00000542260 FAM240AA0A1B0GVK7 77 aa7.87□□□□□ -1.15
SCNN1A-217ENST00000542260 SIGMAR1Q99720 223 aa7.86□□□□□ -1.15
SCNN1A-217ENST00000542260 DSCR10P59022 87 aa7.84□□□□□ -1.15
SCNN1A-217ENST00000542260 KRTAP9-8Q9BYQ0 159 aa7.84□□□□□ -1.15
SCNN1A-217ENST00000542260 UBL5Q9BZL1 73 aa7.84□□□□□ -1.15
SCNN1A-217ENST00000542260 NREPQ16612 68 aa7.83□□□□□ -1.16
SCNN1A-217ENST00000542260 FAM236DA0A1B0GTK5 79 aa7.82□□□□□ -1.16
SCNN1A-217ENST00000542260 FAM236CP0DP71 79 aa7.82□□□□□ -1.16
SCNN1A-217ENST00000542260 LINC00846Q9NV44 126 aa7.82□□□□□ -1.16
SCNN1A-217ENST00000542260 LINC00313P59037 77 aa7.81□□□□□ -1.16
SCNN1A-217ENST00000542260 IGKV4-1P06312 121 aa7.79□□□□□ -1.16
SCNN1A-217ENST00000542260 Q6ZVQ6 151 aa7.78□□□□□ -1.16
SCNN1A-217ENST00000542260 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
SCNN1A-217ENST00000542260 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.76□□□□□ -1.17
SCNN1A-217ENST00000542260 KRTAP9-7A8MTY7 169 aa7.75□□□□□ -1.17
SCNN1A-217ENST00000542260 KRTAP16-1A8MUX0 517 aa7.74□□□□□ -1.17
SCNN1A-217ENST00000542260 USH2AO75445 5202 aa7.73□□□□□ -1.17
SCNN1A-217ENST00000542260 BPY2O14599 106 aa7.73□□□□□ -1.17
SCNN1A-217ENST00000542260 LINC00643Q86TS7 51 aa7.73□□□□□ -1.17
SCNN1A-217ENST00000542260 J3KT08 172 aa7.72□□□□□ -1.17
SCNN1A-217ENST00000542260 LINC00472Q9H8W2 130 aa7.72□□□□□ -1.17
SCNN1A-217ENST00000542260 MT2AP02795 61 aa7.71□□□□□ -1.18
SCNN1A-217ENST00000542260 HRES1P13985 223 aa7.7□□□□□ -1.18
SCNN1A-217ENST00000542260 ATP5EP2Q5VTU8 51 aa7.7□□□□□ -1.18
SCNN1A-217ENST00000542260 MPLKIPQ8TAP9 179 aa7.7□□□□□ -1.18
SCNN1A-217ENST00000542260 DEFB116Q30KQ4 102 aa7.69□□□□□ -1.18
SCNN1A-217ENST00000542260 SSPOA2VEC9 5147 aa7.69□□□□□ -1.18
SCNN1A-217ENST00000542260 IGHV6-1A0A0B4J1U7 121 aa7.68□□□□□ -1.18
SCNN1A-217ENST00000542260 CXCL6P80162 114 aa7.68□□□□□ -1.18
SCNN1A-217ENST00000542260 IGKV3D-7A0A0C4DH55 119 aa7.67□□□□□ -1.18
SCNN1A-217ENST00000542260 NOTCH2NLQ7Z3S9 236 aa7.67□□□□□ -1.18
SCNN1A-217ENST00000542260 C8orf87E5RJ46 101 aa7.66□□□□□ -1.18
SCNN1A-217ENST00000542260 NDUFB1O75438 58 aa7.66□□□□□ -1.18
SCNN1A-217ENST00000542260 MT1FP04733 61 aa7.64□□□□□ -1.19
SCNN1A-217ENST00000542260 KRTAP10-10P60014 251 aa7.64□□□□□ -1.19
SCNN1A-217ENST00000542260 A8MWP4 228 aa7.63□□□□□ -1.19
SCNN1A-217ENST00000542260 A0A1B0GVX0 72 aa7.62□□□□□ -1.19
SCNN1A-217ENST00000542260 LCE2BO14633 110 aa7.6□□□□□ -1.19
SCNN1A-217ENST00000542260 MT-ATP8P03928 68 aa7.6□□□□□ -1.19
SCNN1A-217ENST00000542260 HIST1H4AP62805 103 aaKnown RBP7.6□□□□□ -1.19
SCNN1A-217ENST00000542260 K7EQZ3 153 aa7.59□□□□□ -1.19
SCNN1A-217ENST00000542260 KRTAP19-1Q8IUB9 90 aa7.59□□□□□ -1.19
SCNN1A-217ENST00000542260 PRR15Q8IV56 129 aa7.59□□□□□ -1.19
SCNN1A-217ENST00000542260 KRTAP9-3Q9BYQ3 159 aa7.59□□□□□ -1.19
SCNN1A-217ENST00000542260 Q8N9L7 120 aa7.58□□□□□ -1.2
SCNN1A-217ENST00000542260 ZCCHC13Q8WW36 166 aaKnown RBP7.58□□□□□ -1.2
SCNN1A-217ENST00000542260 FCGBPQ9Y6R7 5405 aaPredicted RBP7.58□□□□□ -1.2
SCNN1A-217ENST00000542260 IMUPQ9GZP8 106 aa7.57□□□□□ -1.2
SCNN1A-217ENST00000542260 SPINK7P58062 85 aa7.54□□□□□ -1.2
SCNN1A-217ENST00000542260 C8orf17Q9NRJ1 99 aa7.53□□□□□ -1.2
SCNN1A-217ENST00000542260 HCG22E2RYF7 251 aa7.51□□□□□ -1.21
SCNN1A-217ENST00000542260 MACF1Q9UPN3 7388 aaKnown RBP7.5□□□□□ -1.21
SCNN1A-217ENST00000542260 A0A087WVE0 104 aa7.5□□□□□ -1.21
SCNN1A-217ENST00000542260 Q8N9P0 234 aaPredicted RBP7.5□□□□□ -1.21
SCNN1A-217ENST00000542260 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
SCNN1A-217ENST00000542260 hDV103S1A0JD37 113 aa7.48□□□□□ -1.21
SCNN1A-217ENST00000542260 CASC2Q6XLA1 102 aa7.48□□□□□ -1.21
SCNN1A-217ENST00000542260 WFDC13Q8IUB5 93 aa7.48□□□□□ -1.21
SCNN1A-217ENST00000542260 TMEM254Q8TBM7 123 aa7.46□□□□□ -1.22
SCNN1A-217ENST00000542260 MRPL34Q9BQ48 92 aaKnown RBP7.44□□□□□ -1.22
SCNN1A-217ENST00000542260 FAM236AA0A1B0GUQ0 79 aa7.43□□□□□ -1.22
SCNN1A-217ENST00000542260 FAM236BA0A1B0GV22 79 aa7.43□□□□□ -1.22
SCNN1A-217ENST00000542260 SCGB1A1P11684 91 aa7.43□□□□□ -1.22
SCNN1A-217ENST00000542260 KRTAP19-6Q3LI70 58 aa7.41□□□□□ -1.22
SCNN1A-217ENST00000542260 SYNE2Q8WXH0 6885 aaKnown RBP7.41□□□□□ -1.22
SCNN1A-217ENST00000542260 NDUFS5O43920 106 aa7.4□□□□□ -1.22
SCNN1A-217ENST00000542260 ATOX1O00244 68 aa7.36□□□□□ -1.23
SCNN1A-217ENST00000542260 SMIM20Q8N5G0 67 aa7.34□□□□□ -1.23
SCNN1A-217ENST00000542260 TP53AIP1Q9HCN2 124 aa7.34□□□□□ -1.23
SCNN1A-217ENST00000542260 H1FX-AS1Q4G0G2 97 aa7.31□□□□□ -1.24
SCNN1A-217ENST00000542260 UQCRQO14949 82 aa7.3□□□□□ -1.24
SCNN1A-217ENST00000542260 TRAV7A0A075B6U4 112 aa7.28□□□□□ -1.24
SCNN1A-217ENST00000542260 OCR1Q9BZK8 76 aa7.28□□□□□ -1.24
SCNN1A-217ENST00000542260 SERP2Q8N6R1 65 aa7.24□□□□□ -1.25
SCNN1A-217ENST00000542260 ANAPC13Q9BS18 74 aa7.24□□□□□ -1.25
SCNN1A-217ENST00000542260 TRAV22A0A0B4J277 110 aa7.23□□□□□ -1.25
SCNN1A-217ENST00000542260 C5orf47Q569G3 176 aa7.23□□□□□ -1.25
SCNN1A-217ENST00000542260 C7orf65Q6ZTY9 151 aa7.23□□□□□ -1.25
SCNN1A-217ENST00000542260 H0Y9P7 68 aa7.22□□□□□ -1.25
SCNN1A-217ENST00000542260 MP68P56378 58 aa7.22□□□□□ -1.25
SCNN1A-217ENST00000542260 IGKV2D-30A0A075B6S6 120 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms