RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 LCA10Q71F78 164 aa9.18□□□□□ -0.94
CNOT9-208ENST00000542068 KRTAP13-1Q8IUC0 172 aa9.18□□□□□ -0.94
CNOT9-208ENST00000542068 A0A1B0GVX0 72 aa9.17□□□□□ -0.94
CNOT9-208ENST00000542068 KMT2AQ03164 3969 aa9.15□□□□□ -0.94
CNOT9-208ENST00000542068 MRPL34Q9BQ48 92 aaKnown RBP9.14□□□□□ -0.95
CNOT9-208ENST00000542068 PRR26Q8N8Z3 221 aa9.13□□□□□ -0.95
CNOT9-208ENST00000542068 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
CNOT9-208ENST00000542068 DNHD1Q96M86 4753 aa9.12□□□□□ -0.95
CNOT9-208ENST00000542068 HRES1P13985 223 aa9.12□□□□□ -0.95
CNOT9-208ENST00000542068 ZNF861PO60384 105 aa9.12□□□□□ -0.95
CNOT9-208ENST00000542068 WWC2-AS2Q96NR7 200 aa9.12□□□□□ -0.95
CNOT9-208ENST00000542068 ZNF706Q9Y5V0 76 aaPredicted RBP9.11□□□□□ -0.95
CNOT9-208ENST00000542068 LOC101927531A0A1B0GV80 90 aa9.1□□□□□ -0.95
CNOT9-208ENST00000542068 SPINK7P58062 85 aa9.09□□□□□ -0.95
CNOT9-208ENST00000542068 Q5W150 140 aa9.09□□□□□ -0.95
CNOT9-208ENST00000542068 Q75L30 129 aa9.09□□□□□ -0.95
CNOT9-208ENST00000542068 DNAH8Q96JB1 4490 aa9.08□□□□□ -0.96
CNOT9-208ENST00000542068 KRTAP10-2P60368 255 aa9.06□□□□□ -0.96
CNOT9-208ENST00000542068 Q6ZR54 194 aa9.06□□□□□ -0.96
CNOT9-208ENST00000542068 ASB16-AS1Q495Z4 193 aa9.04□□□□□ -0.96
CNOT9-208ENST00000542068 IGLV7-43P04211 117 aa9.03□□□□□ -0.96
CNOT9-208ENST00000542068 LINC00483Q53H64 154 aa9.03□□□□□ -0.96
CNOT9-208ENST00000542068 PLAC8Q9NZF1 115 aa9.02□□□□□ -0.97
CNOT9-208ENST00000542068 ATP11AUNQ6ZP68 121 aa9.01□□□□□ -0.97
CNOT9-208ENST00000542068 LINC01558Q9Y6Z2 57 aa9.01□□□□□ -0.97
CNOT9-208ENST00000542068 CDC42SE1Q9NRR8 79 aa8.99□□□□□ -0.97
CNOT9-208ENST00000542068 KTN1-AS1Q86SY8 53 aa8.98□□□□□ -0.97
CNOT9-208ENST00000542068 DNAH17Q9UFH2 4485 aa8.98□□□□□ -0.97
CNOT9-208ENST00000542068 HECTD4Q9Y4D8 3996 aa8.97□□□□□ -0.97
CNOT9-208ENST00000542068 VPS13DQ5THJ4 4388 aa8.94□□□□□ -0.98
CNOT9-208ENST00000542068 DNAH2Q9P225 4427 aa8.94□□□□□ -0.98
CNOT9-208ENST00000542068 RBM12B-AS1Q9P1G2 102 aa8.92□□□□□ -0.98
CNOT9-208ENST00000542068 A6NN06 94 aa8.92□□□□□ -0.98
CNOT9-208ENST00000542068 KRTAP10-1P60331 282 aa8.91□□□□□ -0.98
CNOT9-208ENST00000542068 DNAH11Q96DT5 4516 aa8.91□□□□□ -0.98
CNOT9-208ENST00000542068 DYNC2H1Q8NCM8 4307 aaKnown RBP8.9□□□□□ -0.99
CNOT9-208ENST00000542068 ACYP2P14621 99 aa8.89□□□□□ -0.99
CNOT9-208ENST00000542068 DNAH6Q9C0G6 4158 aa8.89□□□□□ -0.99
CNOT9-208ENST00000542068 LINC00313P59037 77 aa8.88□□□□□ -0.99
CNOT9-208ENST00000542068 IGKV2D-30A0A075B6S6 120 aa8.88□□□□□ -0.99
CNOT9-208ENST00000542068 IGKV2-30P06310 120 aa8.88□□□□□ -0.99
CNOT9-208ENST00000542068 SMR3BP02814 79 aaPredicted RBP8.86□□□□□ -0.99
CNOT9-208ENST00000542068 C4orf48Q5BLP8 95 aa8.86□□□□□ -0.99
CNOT9-208ENST00000542068 PRAC1Q96KF2 57 aa8.84□□□□□ -0.99
CNOT9-208ENST00000542068 KRTAP13-3Q3SY46 172 aa8.83□□□□□ -1
CNOT9-208ENST00000542068 PLA2G1BP04054 148 aaKnown RBP8.83□□□□□ -1
CNOT9-208ENST00000542068 A0A1B0GU69 56 aa8.82□□□□□ -1
CNOT9-208ENST00000542068 C7orf65Q6ZTY9 151 aa8.81□□□□□ -1
CNOT9-208ENST00000542068 SPINK1P00995 79 aa8.81□□□□□ -1
CNOT9-208ENST00000542068 SSBP3-AS1Q7Z2R9 100 aa8.8□□□□□ -1
CNOT9-208ENST00000542068 ADM2Q7Z4H4 148 aa8.79□□□□□ -1
CNOT9-208ENST00000542068 KRTAP13-2Q52LG2 175 aa8.78□□□□□ -1
CNOT9-208ENST00000542068 FAM229AH3BQW9 127 aa8.77□□□□□ -1.01
CNOT9-208ENST00000542068 C8orf87E5RJ46 101 aa8.76□□□□□ -1.01
CNOT9-208ENST00000542068 TYMSOSQ8TAI1 123 aa8.76□□□□□ -1.01
CNOT9-208ENST00000542068 DMAC1Q96GE9 116 aa8.75□□□□□ -1.01
CNOT9-208ENST00000542068 ALMS1Q8TCU4 4167 aa8.75□□□□□ -1.01
CNOT9-208ENST00000542068 LRP1BQ9NZR2 4599 aa8.75□□□□□ -1.01
CNOT9-208ENST00000542068 HYDINQ4G0P3 5121 aa8.71□□□□□ -1.01
CNOT9-208ENST00000542068 DNAH5Q8TE73 4624 aa8.7□□□□□ -1.02
CNOT9-208ENST00000542068 Q8N1X5 172 aa8.69□□□□□ -1.02
CNOT9-208ENST00000542068 DMBT1Q9UGM3 2413 aaPredicted RBP8.68□□□□□ -1.02
CNOT9-208ENST00000542068 MIR22HGQ0VDD5 57 aa8.66□□□□□ -1.02
CNOT9-208ENST00000542068 FLG2Q5D862 2391 aaPredicted RBP8.65□□□□□ -1.02
CNOT9-208ENST00000542068 C9orf92A6NGG3 77 aa8.64□□□□□ -1.03
CNOT9-208ENST00000542068 KRTAP16-1A8MUX0 517 aa8.61□□□□□ -1.03
CNOT9-208ENST00000542068 UQCR11O14957 56 aa8.61□□□□□ -1.03
CNOT9-208ENST00000542068 KRTAP1-4P0C5Y4 121 aa8.6□□□□□ -1.03
CNOT9-208ENST00000542068 Q6ZSA8 131 aa8.59□□□□□ -1.03
CNOT9-208ENST00000542068 VPS13BQ7Z7G8 4022 aa8.59□□□□□ -1.03
CNOT9-208ENST00000542068 PKHD1P08F94 4074 aa8.57□□□□□ -1.04
CNOT9-208ENST00000542068 LINC00304Q8N9R0 145 aa8.57□□□□□ -1.04
CNOT9-208ENST00000542068 SPATA8Q6RVD6 105 aa8.56□□□□□ -1.04
CNOT9-208ENST00000542068 FAT1Q14517 4588 aa8.53□□□□□ -1.04
CNOT9-208ENST00000542068 FAT2Q9NYQ8 4349 aa8.48□□□□□ -1.05
CNOT9-208ENST00000542068 CSAG1Q6PB30 78 aa8.46□□□□□ -1.05
CNOT9-208ENST00000542068 LINC01554Q52M75 96 aa8.41□□□□□ -1.06
CNOT9-208ENST00000542068 PKD1P98161 4303 aa8.39□□□□□ -1.07
CNOT9-208ENST00000542068 DYNC1H1Q14204 4646 aaKnown RBP8.35□□□□□ -1.07
CNOT9-208ENST00000542068 SACSQ9NZJ4 4579 aa8.33□□□□□ -1.08
CNOT9-208ENST00000542068 CRIPTQ9P021 101 aa8.32□□□□□ -1.08
CNOT9-208ENST00000542068 H0YAA0 97 aa8.3□□□□□ -1.08
CNOT9-208ENST00000542068 A0A1B0GU33 70 aa8.27□□□□□ -1.09
CNOT9-208ENST00000542068 KRTAP3-1Q9BYR8 98 aa8.25□□□□□ -1.09
CNOT9-208ENST00000542068 KMT2CQ8NEZ4 4911 aaKnown RBP8.23□□□□□ -1.09
CNOT9-208ENST00000542068 MYCBP2O75592 4640 aa8.21□□□□□ -1.09
CNOT9-208ENST00000542068 LRP1Q07954 4544 aaKnown RBP8.19□□□□□ -1.1
CNOT9-208ENST00000542068 H3BS24 57 aa8.17□□□□□ -1.1
CNOT9-208ENST00000542068 A0A1B0GVY2 172 aa8.17□□□□□ -1.1
CNOT9-208ENST00000542068 H1FX-AS1Q4G0G2 97 aa8.17□□□□□ -1.1
CNOT9-208ENST00000542068 A8MUU9 505 aa8.16□□□□□ -1.1
CNOT9-208ENST00000542068 APOBP04114 4563 aaKnown RBP8.15□□□□□ -1.1
CNOT9-208ENST00000542068 Q5VSD8 79 aa8.14□□□□□ -1.11
CNOT9-208ENST00000542068 C20orf166-AS1Q96NR2 134 aa8.12□□□□□ -1.11
CNOT9-208ENST00000542068 A0A0D9SG42 100 aa8.11□□□□□ -1.11
CNOT9-208ENST00000542068 RPS29P62273 56 aaKnown RBP8.09□□□□□ -1.11
CNOT9-208ENST00000542068 KRTAP21-3Q3LHN1 58 aa8.09□□□□□ -1.11
CNOT9-208ENST00000542068 KRTAP10-4P60372 401 aaPredicted RBP8.08□□□□□ -1.12
CNOT9-208ENST00000542068 COX6B2Q6YFQ2 88 aa8.07□□□□□ -1.12
CNOT9-208ENST00000542068 KRTAP25-1Q3LHN0 102 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms