RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ATXN8Q156A1 80 aa5.16□□□□□ -1.58
YBX3-212ENST00000542002 DEFB116Q30KQ4 102 aa5.16□□□□□ -1.58
YBX3-212ENST00000542002 TAX1BP3O14907 124 aa5.15□□□□□ -1.59
YBX3-212ENST00000542002 LINC00472Q9H8W2 130 aa5.15□□□□□ -1.59
YBX3-212ENST00000542002 KRTAP9-3Q9BYQ3 159 aa5.14□□□□□ -1.59
YBX3-212ENST00000542002 C9orf118A6NHY6 69 aa5.13□□□□□ -1.59
YBX3-212ENST00000542002 DSCR10P59022 87 aa5.13□□□□□ -1.59
YBX3-212ENST00000542002 Q75L30 129 aa5.13□□□□□ -1.59
YBX3-212ENST00000542002 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
YBX3-212ENST00000542002 DSCR8Q96T75 97 aa5.13□□□□□ -1.59
YBX3-212ENST00000542002 IGKV4-1P06312 121 aa5.12□□□□□ -1.59
YBX3-212ENST00000542002 VPS25Q9BRG1 176 aa5.12□□□□□ -1.59
YBX3-212ENST00000542002 TRBV20-1A0A075B6N2 111 aa5.11□□□□□ -1.59
YBX3-212ENST00000542002 C9JAW5 83 aa5.11□□□□□ -1.59
YBX3-212ENST00000542002 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
YBX3-212ENST00000542002 C20orf166-AS1Q96NR2 134 aa5.11□□□□□ -1.59
YBX3-212ENST00000542002 A0A1W2PPM0 123 aa5.1□□□□□ -1.59
YBX3-212ENST00000542002 A8MUU9 505 aa5.1□□□□□ -1.59
YBX3-212ENST00000542002 KRTAP16-1A8MUX0 517 aa5.1□□□□□ -1.59
YBX3-212ENST00000542002 Q6ZQT0 140 aa5.1□□□□□ -1.59
YBX3-212ENST00000542002 SIGMAR1Q99720 223 aa5.1□□□□□ -1.59
YBX3-212ENST00000542002 LOC110117498A0A087WWA1 95 aa5.08□□□□□ -1.6
YBX3-212ENST00000542002 JMJD7-PLA2G4BH0Y9G9 81 aa5.08□□□□□ -1.6
YBX3-212ENST00000542002 LINC00313P59037 77 aa5.08□□□□□ -1.6
YBX3-212ENST00000542002 ATP11AUNQ6ZP68 121 aa5.08□□□□□ -1.6
YBX3-212ENST00000542002 MTURNQ8N3F0 131 aa5.08□□□□□ -1.6
YBX3-212ENST00000542002 C14orf132Q9NPU4 83 aa5.08□□□□□ -1.6
YBX3-212ENST00000542002 IGHV6-1A0A0B4J1U7 121 aa5.06□□□□□ -1.6
YBX3-212ENST00000542002 MT1HP80294 61 aa5.06□□□□□ -1.6
YBX3-212ENST00000542002 LYRM7Q5U5X0 104 aa5.06□□□□□ -1.6
YBX3-212ENST00000542002 FLGP20930 4061 aaPredicted RBP5.06□□□□□ -1.6
YBX3-212ENST00000542002 A0A1B0GVX0 72 aa5.03□□□□□ -1.6
YBX3-212ENST00000542002 PDE6GP18545 87 aa5.03□□□□□ -1.6
YBX3-212ENST00000542002 H3BT86 120 aa5.02□□□□□ -1.61
YBX3-212ENST00000542002 SPCS1Q9Y6A9 102 aa5.02□□□□□ -1.61
YBX3-212ENST00000542002 A0A1B0GW54 56 aa5.01□□□□□ -1.61
YBX3-212ENST00000542002 COL5A1-AS1Q5SY13 56 aa5.01□□□□□ -1.61
YBX3-212ENST00000542002 IGKV3D-7A0A0C4DH55 119 aa5□□□□□ -1.61
YBX3-212ENST00000542002 J3KT08 172 aa5□□□□□ -1.61
YBX3-212ENST00000542002 C21orf62-AS1Q17RA5 79 aa5□□□□□ -1.61
YBX3-212ENST00000542002 PCP4L1A6NKN8 68 aa4.99□□□□□ -1.61
YBX3-212ENST00000542002 C8orf87E5RJ46 101 aa4.99□□□□□ -1.61
YBX3-212ENST00000542002 PRO0461Q9UI25 63 aa4.99□□□□□ -1.61
YBX3-212ENST00000542002 A8MWP4 228 aa4.98□□□□□ -1.61
YBX3-212ENST00000542002 NREPQ16612 68 aa4.98□□□□□ -1.61
YBX3-212ENST00000542002 K7EP34 96 aa4.96□□□□□ -1.62
YBX3-212ENST00000542002 COX6B2Q6YFQ2 88 aa4.96□□□□□ -1.62
YBX3-212ENST00000542002 C8orf17Q9NRJ1 99 aa4.96□□□□□ -1.62
YBX3-212ENST00000542002 NDUFB1O75438 58 aa4.95□□□□□ -1.62
YBX3-212ENST00000542002 KRTAP10-6P60371 365 aaPredicted RBP4.95□□□□□ -1.62
YBX3-212ENST00000542002 PRR15Q8IV56 129 aa4.95□□□□□ -1.62
YBX3-212ENST00000542002 Q8N9P0 234 aaPredicted RBP4.95□□□□□ -1.62
YBX3-212ENST00000542002 HRES1P13985 223 aa4.93□□□□□ -1.62
YBX3-212ENST00000542002 K7EQZ3 153 aa4.92□□□□□ -1.62
YBX3-212ENST00000542002 MPLKIPQ8TAP9 179 aa4.92□□□□□ -1.62
YBX3-212ENST00000542002 ZCCHC13Q8WW36 166 aaKnown RBP4.92□□□□□ -1.62
YBX3-212ENST00000542002 MMP24-AS1A0A0U1RRL7 71 aa4.91□□□□□ -1.62
YBX3-212ENST00000542002 M0R2T5 61 aa4.91□□□□□ -1.62
YBX3-212ENST00000542002 Q6ZVQ6 151 aa4.91□□□□□ -1.62
YBX3-212ENST00000542002 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
YBX3-212ENST00000542002 BPY2O14599 106 aa4.89□□□□□ -1.63
YBX3-212ENST00000542002 Q8N9L7 120 aa4.89□□□□□ -1.63
YBX3-212ENST00000542002 LINC00846Q9NV44 126 aa4.89□□□□□ -1.63
YBX3-212ENST00000542002 SPINK7P58062 85 aa4.88□□□□□ -1.63
YBX3-212ENST00000542002 GTF2H5Q6ZYL4 71 aa4.87□□□□□ -1.63
YBX3-212ENST00000542002 TMEM254Q8TBM7 123 aa4.87□□□□□ -1.63
YBX3-212ENST00000542002 MRPL34Q9BQ48 92 aaKnown RBP4.87□□□□□ -1.63
YBX3-212ENST00000542002 hDV103S1A0JD37 113 aa4.86□□□□□ -1.63
YBX3-212ENST00000542002 F8W1H4 67 aa4.86□□□□□ -1.63
YBX3-212ENST00000542002 ETDBQ3ZM63 59 aa4.85□□□□□ -1.63
YBX3-212ENST00000542002 Q5W150 140 aa4.83□□□□□ -1.64
YBX3-212ENST00000542002 FAM236DA0A1B0GTK5 79 aa4.82□□□□□ -1.64
YBX3-212ENST00000542002 FAM236CP0DP71 79 aa4.82□□□□□ -1.64
YBX3-212ENST00000542002 WFDC13Q8IUB5 93 aa4.82□□□□□ -1.64
YBX3-212ENST00000542002 RBM12B-AS1Q9P1G2 102 aa4.82□□□□□ -1.64
YBX3-212ENST00000542002 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
YBX3-212ENST00000542002 NDUFS5O43920 106 aa4.81□□□□□ -1.64
YBX3-212ENST00000542002 UBL5Q9BZL1 73 aa4.81□□□□□ -1.64
YBX3-212ENST00000542002 CASC2Q6XLA1 102 aa4.8□□□□□ -1.64
YBX3-212ENST00000542002 HCG22E2RYF7 251 aa4.77□□□□□ -1.65
YBX3-212ENST00000542002 MT2AP02795 61 aa4.75□□□□□ -1.65
YBX3-212ENST00000542002 IGKV2D-30A0A075B6S6 120 aa4.74□□□□□ -1.65
YBX3-212ENST00000542002 IGKV2-30P06310 120 aa4.74□□□□□ -1.65
YBX3-212ENST00000542002 CXCL6P80162 114 aa4.74□□□□□ -1.65
YBX3-212ENST00000542002 A0A1B0GV90 55 aa4.73□□□□□ -1.65
YBX3-212ENST00000542002 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
YBX3-212ENST00000542002 MT1FP04733 61 aa4.72□□□□□ -1.65
YBX3-212ENST00000542002 USH2AO75445 5202 aa4.71□□□□□ -1.66
YBX3-212ENST00000542002 ACYP1P07311 99 aa4.69□□□□□ -1.66
YBX3-212ENST00000542002 C7orf65Q6ZTY9 151 aa4.69□□□□□ -1.66
YBX3-212ENST00000542002 FAM240AA0A1B0GVK7 77 aa4.68□□□□□ -1.66
YBX3-212ENST00000542002 H1FX-AS1Q4G0G2 97 aa4.68□□□□□ -1.66
YBX3-212ENST00000542002 C4orf26Q17RF5 130 aa4.67□□□□□ -1.66
YBX3-212ENST00000542002 KRTAP3-1Q9BYR8 98 aa4.67□□□□□ -1.66
YBX3-212ENST00000542002 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
YBX3-212ENST00000542002 TP53AIP1Q9HCN2 124 aa4.65□□□□□ -1.67
YBX3-212ENST00000542002 SSPOA2VEC9 5147 aa4.65□□□□□ -1.67
YBX3-212ENST00000542002 HIST1H4AP62805 103 aaKnown RBP4.61□□□□□ -1.67
YBX3-212ENST00000542002 ATP5EP2Q5VTU8 51 aa4.61□□□□□ -1.67
YBX3-212ENST00000542002 A0A087WVE0 104 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms