RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 MOBPQ13875 183 aa5.96□□□□□ -1.46
LMO3-227ENST00000541764 HRCT1Q6UXD1 115 aa5.96□□□□□ -1.46
LMO3-227ENST00000541764 SPANXA2-OT1Q8N9U9 137 aa5.96□□□□□ -1.46
LMO3-227ENST00000541764 DNAH8Q96JB1 4490 aa5.95□□□□□ -1.46
LMO3-227ENST00000541764 C1orf134Q5TEV5 83 aa5.95□□□□□ -1.46
LMO3-227ENST00000541764 TP53AIP1Q9HCN2 124 aa5.94□□□□□ -1.46
LMO3-227ENST00000541764 IGLV9-49A0A0B4J1Y8 123 aa5.93□□□□□ -1.46
LMO3-227ENST00000541764 H0Y9P7 68 aa5.93□□□□□ -1.46
LMO3-227ENST00000541764 TENM2Q9NT68 2774 aa5.93□□□□□ -1.46
LMO3-227ENST00000541764 FAM229BQ4G0N7 80 aa5.92□□□□□ -1.46
LMO3-227ENST00000541764 C1orf64Q8NEQ6 169 aa5.92□□□□□ -1.46
LMO3-227ENST00000541764 LINC00208Q96KT6 92 aa5.92□□□□□ -1.46
LMO3-227ENST00000541764 CD164Q04900 197 aa5.91□□□□□ -1.46
LMO3-227ENST00000541764 C8orf17Q9NRJ1 99 aa5.91□□□□□ -1.46
LMO3-227ENST00000541764 IGLV7-43P04211 117 aa5.9□□□□□ -1.46
LMO3-227ENST00000541764 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
LMO3-227ENST00000541764 A0A1B0GVX0 72 aa5.9□□□□□ -1.47
LMO3-227ENST00000541764 SRRM2Q9UQ35 2752 aaKnown RBP5.89□□□□□ -1.47
LMO3-227ENST00000541764 Q1T7F1 81 aa5.89□□□□□ -1.47
LMO3-227ENST00000541764 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
LMO3-227ENST00000541764 SSBP3-AS1Q7Z2R9 100 aa5.88□□□□□ -1.47
LMO3-227ENST00000541764 KMT2AQ03164 3969 aa5.88□□□□□ -1.47
LMO3-227ENST00000541764 DNAH11Q96DT5 4516 aa5.86□□□□□ -1.47
LMO3-227ENST00000541764 ALMS1Q8TCU4 4167 aa5.85□□□□□ -1.47
LMO3-227ENST00000541764 IGLV7-46A0A075B6I9 117 aa5.85□□□□□ -1.47
LMO3-227ENST00000541764 CDK2AP2O75956 126 aa5.85□□□□□ -1.47
LMO3-227ENST00000541764 Q6ZSA8 131 aa5.84□□□□□ -1.47
LMO3-227ENST00000541764 LINC00336Q6ZUF6 198 aa5.84□□□□□ -1.47
LMO3-227ENST00000541764 MRPL34Q9BQ48 92 aaKnown RBP5.84□□□□□ -1.47
LMO3-227ENST00000541764 PRO0628Q9UI54 55 aa5.84□□□□□ -1.47
LMO3-227ENST00000541764 DNAH5Q8TE73 4624 aa5.84□□□□□ -1.47
LMO3-227ENST00000541764 V9GYY9 64 aa5.83□□□□□ -1.48
LMO3-227ENST00000541764 LY6G6CO95867 125 aa5.83□□□□□ -1.48
LMO3-227ENST00000541764 ANAPC11Q9NYG5 84 aa5.83□□□□□ -1.48
LMO3-227ENST00000541764 MEGF8Q7Z7M0 2845 aa5.82□□□□□ -1.48
LMO3-227ENST00000541764 IGHV6-1A0A0B4J1U7 121 aa5.82□□□□□ -1.48
LMO3-227ENST00000541764 MPLKIPQ8TAP9 179 aa5.82□□□□□ -1.48
LMO3-227ENST00000541764 CIRBP-AS1Q8TBR5 109 aa5.82□□□□□ -1.48
LMO3-227ENST00000541764 DNHD1Q96M86 4753 aa5.81□□□□□ -1.48
LMO3-227ENST00000541764 C8orf87E5RJ46 101 aa5.81□□□□□ -1.48
LMO3-227ENST00000541764 C1orf195Q5TG92 126 aa5.81□□□□□ -1.48
LMO3-227ENST00000541764 KRTAP10-2P60368 255 aa5.8□□□□□ -1.48
LMO3-227ENST00000541764 FRAS1Q86XX4 4008 aa5.8□□□□□ -1.48
LMO3-227ENST00000541764 PRR4Q16378 134 aa5.79□□□□□ -1.48
LMO3-227ENST00000541764 FBN3Q75N90 2809 aa5.79□□□□□ -1.48
LMO3-227ENST00000541764 KRTAP21-3Q3LHN1 58 aa5.78□□□□□ -1.48
LMO3-227ENST00000541764 KRTAP13-3Q3SY46 172 aa5.77□□□□□ -1.49
LMO3-227ENST00000541764 A0A087X002 238 aa5.77□□□□□ -1.49
LMO3-227ENST00000541764 LOC101927531A0A1B0GV80 90 aa5.77□□□□□ -1.49
LMO3-227ENST00000541764 NOTCH2NLQ7Z3S9 236 aa5.77□□□□□ -1.49
LMO3-227ENST00000541764 NDUFS5O43920 106 aa5.75□□□□□ -1.49
LMO3-227ENST00000541764 KRTAP10-1P60331 282 aa5.75□□□□□ -1.49
LMO3-227ENST00000541764 LIMD2Q9BT23 127 aa5.75□□□□□ -1.49
LMO3-227ENST00000541764 KRTAP13-2Q52LG2 175 aa5.74□□□□□ -1.49
LMO3-227ENST00000541764 Q8N9P0 234 aaPredicted RBP5.74□□□□□ -1.49
LMO3-227ENST00000541764 FAT2Q9NYQ8 4349 aa5.74□□□□□ -1.49
LMO3-227ENST00000541764 PKD1P98161 4303 aa5.74□□□□□ -1.49
LMO3-227ENST00000541764 COA5Q86WW8 74 aa5.73□□□□□ -1.49
LMO3-227ENST00000541764 LRP1BQ9NZR2 4599 aa5.73□□□□□ -1.49
LMO3-227ENST00000541764 TGP01266 2768 aa5.72□□□□□ -1.49
LMO3-227ENST00000541764 KRTAP1-4P0C5Y4 121 aa5.71□□□□□ -1.49
LMO3-227ENST00000541764 PCOTHQ58A44 107 aa5.71□□□□□ -1.49
LMO3-227ENST00000541764 SPINK6Q6UWN8 80 aa5.71□□□□□ -1.49
LMO3-227ENST00000541764 BRK1Q8WUW1 75 aa5.71□□□□□ -1.49
LMO3-227ENST00000541764 LINC00313P59037 77 aa5.7□□□□□ -1.5
LMO3-227ENST00000541764 Q5W150 140 aa5.7□□□□□ -1.5
LMO3-227ENST00000541764 Q5VV11 94 aa5.69□□□□□ -1.5
LMO3-227ENST00000541764 SACSQ9NZJ4 4579 aa5.67□□□□□ -1.5
LMO3-227ENST00000541764 A8MUN3 132 aa5.67□□□□□ -1.5
LMO3-227ENST00000541764 KRTAP16-1A8MUX0 517 aa5.66□□□□□ -1.5
LMO3-227ENST00000541764 PSPHP1O15172 72 aa5.66□□□□□ -1.5
LMO3-227ENST00000541764 HRES1P13985 223 aa5.66□□□□□ -1.5
LMO3-227ENST00000541764 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
LMO3-227ENST00000541764 RPS29P62273 56 aaKnown RBP5.65□□□□□ -1.5
LMO3-227ENST00000541764 Q75L30 129 aa5.65□□□□□ -1.5
LMO3-227ENST00000541764 SPINK1P00995 79 aa5.64□□□□□ -1.51
LMO3-227ENST00000541764 IGKV2-30P06310 120 aa5.63□□□□□ -1.51
LMO3-227ENST00000541764 HYDINQ4G0P3 5121 aa5.62□□□□□ -1.51
LMO3-227ENST00000541764 ACYP2P14621 99 aa5.62□□□□□ -1.51
LMO3-227ENST00000541764 DMAC1Q96GE9 116 aa5.62□□□□□ -1.51
LMO3-227ENST00000541764 VPS13BQ7Z7G8 4022 aa5.61□□□□□ -1.51
LMO3-227ENST00000541764 PRR15LQ9BU68 103 aa5.61□□□□□ -1.51
LMO3-227ENST00000541764 PLA2G1BP04054 148 aaKnown RBP5.6□□□□□ -1.51
LMO3-227ENST00000541764 SPAG11AQ6PDA7 123 aa5.6□□□□□ -1.51
LMO3-227ENST00000541764 PRR26Q8N8Z3 221 aa5.6□□□□□ -1.51
LMO3-227ENST00000541764 TYMSOSQ8TAI1 123 aa5.59□□□□□ -1.51
LMO3-227ENST00000541764 CHKB-CPT1BH3BT56 60 aa5.58□□□□□ -1.52
LMO3-227ENST00000541764 DYNC1H1Q14204 4646 aaKnown RBP5.56□□□□□ -1.52
LMO3-227ENST00000541764 LINC00304Q8N9R0 145 aa5.54□□□□□ -1.52
LMO3-227ENST00000541764 A0A1B0GVY2 172 aa5.53□□□□□ -1.52
LMO3-227ENST00000541764 CDC42SE1Q9NRR8 79 aa5.52□□□□□ -1.53
LMO3-227ENST00000541764 ATP11AUNQ6ZP68 121 aa5.51□□□□□ -1.53
LMO3-227ENST00000541764 LCA10Q71F78 164 aa5.51□□□□□ -1.53
LMO3-227ENST00000541764 PKHD1L1Q86WI1 4243 aa5.51□□□□□ -1.53
LMO3-227ENST00000541764 A6NED7 52 aa5.51□□□□□ -1.53
LMO3-227ENST00000541764 KRTAP10-4P60372 401 aaPredicted RBP5.5□□□□□ -1.53
LMO3-227ENST00000541764 APOBP04114 4563 aaKnown RBP5.5□□□□□ -1.53
LMO3-227ENST00000541764 IGKV2D-30A0A075B6S6 120 aa5.49□□□□□ -1.53
LMO3-227ENST00000541764 RETNLBQ9BQ08 111 aa5.48□□□□□ -1.53
LMO3-227ENST00000541764 A8MU10 97 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms