RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 A6NED7 52 aa5.22□□□□□ -1.57
THBS3-210ENST00000541576 DSCR10P59022 87 aa5.22□□□□□ -1.57
THBS3-210ENST00000541576 A0A087WSZ3 146 aa5.21□□□□□ -1.58
THBS3-210ENST00000541576 MP68P56378 58 aa5.21□□□□□ -1.58
THBS3-210ENST00000541576 ANAPC11Q9NYG5 84 aa5.21□□□□□ -1.58
THBS3-210ENST00000541576 HCG22E2RYF7 251 aa5.2□□□□□ -1.58
THBS3-210ENST00000541576 PCOTHQ58A44 107 aa5.2□□□□□ -1.58
THBS3-210ENST00000541576 IGFL1Q6UW32 110 aa5.2□□□□□ -1.58
THBS3-210ENST00000541576 IGLV9-49A0A0B4J1Y8 123 aa5.19□□□□□ -1.58
THBS3-210ENST00000541576 Q8NBF4 154 aa5.19□□□□□ -1.58
THBS3-210ENST00000541576 CD164Q04900 197 aa5.18□□□□□ -1.58
THBS3-210ENST00000541576 Q1T7F1 81 aa5.18□□□□□ -1.58
THBS3-210ENST00000541576 Q5VV11 94 aa5.17□□□□□ -1.58
THBS3-210ENST00000541576 EPPK1P58107 5090 aaKnown RBP5.17□□□□□ -1.58
THBS3-210ENST00000541576 H0Y9P7 68 aa5.17□□□□□ -1.58
THBS3-210ENST00000541576 RYR1P21817 5038 aa5.17□□□□□ -1.58
THBS3-210ENST00000541576 A0A1B0GW54 56 aa5.16□□□□□ -1.58
THBS3-210ENST00000541576 CDK2AP2O75956 126 aa5.16□□□□□ -1.58
THBS3-210ENST00000541576 MOBPQ13875 183 aa5.16□□□□□ -1.58
THBS3-210ENST00000541576 SPINK6Q6UWN8 80 aa5.16□□□□□ -1.58
THBS3-210ENST00000541576 SPAG11AQ6PDA7 123 aa5.16□□□□□ -1.58
THBS3-210ENST00000541576 HSPG2P98160 4391 aa5.15□□□□□ -1.58
THBS3-210ENST00000541576 KRTAP10-4P60372 401 aaPredicted RBP5.14□□□□□ -1.59
THBS3-210ENST00000541576 KRTAP1-4P0C5Y4 121 aa5.14□□□□□ -1.59
THBS3-210ENST00000541576 RBM12B-AS1Q9P1G2 102 aa5.14□□□□□ -1.59
THBS3-210ENST00000541576 FAM229AH3BQW9 127 aa5.13□□□□□ -1.59
THBS3-210ENST00000541576 H3BS24 57 aa5.13□□□□□ -1.59
THBS3-210ENST00000541576 NDUFS5O43920 106 aa5.13□□□□□ -1.59
THBS3-210ENST00000541576 ZCCHC13Q8WW36 166 aaKnown RBP5.13□□□□□ -1.59
THBS3-210ENST00000541576 KIAA1109Q2LD37 5005 aa5.13□□□□□ -1.59
THBS3-210ENST00000541576 A0A087X002 238 aa5.13□□□□□ -1.59
THBS3-210ENST00000541576 CASC2Q6XLA1 102 aa5.13□□□□□ -1.59
THBS3-210ENST00000541576 PLA2G1BP04054 148 aaKnown RBP5.12□□□□□ -1.59
THBS3-210ENST00000541576 Q8N9P0 234 aaPredicted RBP5.12□□□□□ -1.59
THBS3-210ENST00000541576 NDUFB1O75438 58 aa5.12□□□□□ -1.59
THBS3-210ENST00000541576 LCA10Q71F78 164 aa5.11□□□□□ -1.59
THBS3-210ENST00000541576 SSBP3-AS1Q7Z2R9 100 aa5.11□□□□□ -1.59
THBS3-210ENST00000541576 KRTAP13-2Q52LG2 175 aa5.11□□□□□ -1.59
THBS3-210ENST00000541576 Q5VSD8 79 aa5.1□□□□□ -1.59
THBS3-210ENST00000541576 COA5Q86WW8 74 aa5.1□□□□□ -1.59
THBS3-210ENST00000541576 KTN1-AS1Q86SY8 53 aa5.09□□□□□ -1.59
THBS3-210ENST00000541576 CYP4F30PQ9H0H9 118 aa5.08□□□□□ -1.6
THBS3-210ENST00000541576 TYMSOSQ8TAI1 123 aa5.07□□□□□ -1.6
THBS3-210ENST00000541576 LIMD2Q9BT23 127 aa5.07□□□□□ -1.6
THBS3-210ENST00000541576 PKHD1L1Q86WI1 4243 aa5.06□□□□□ -1.6
THBS3-210ENST00000541576 PRAC1Q96KF2 57 aa5.06□□□□□ -1.6
THBS3-210ENST00000541576 PRR26Q8N8Z3 221 aa5.06□□□□□ -1.6
THBS3-210ENST00000541576 KRTAP17-1Q9BYP8 105 aa5.06□□□□□ -1.6
THBS3-210ENST00000541576 SPINK7P58062 85 aa5.04□□□□□ -1.6
THBS3-210ENST00000541576 Q8N1X5 172 aa5.04□□□□□ -1.6
THBS3-210ENST00000541576 LINC00472Q9H8W2 130 aa5.04□□□□□ -1.6
THBS3-210ENST00000541576 FLG2Q5D862 2391 aaPredicted RBP5.02□□□□□ -1.61
THBS3-210ENST00000541576 IGHV6-1A0A0B4J1U7 121 aa5.02□□□□□ -1.61
THBS3-210ENST00000541576 ATP11AUNQ6ZP68 121 aa5.02□□□□□ -1.61
THBS3-210ENST00000541576 Q96NJ1 140 aa5.02□□□□□ -1.61
THBS3-210ENST00000541576 LOC101927531A0A1B0GV80 90 aa5.01□□□□□ -1.61
THBS3-210ENST00000541576 LINC00304Q8N9R0 145 aa5.01□□□□□ -1.61
THBS3-210ENST00000541576 LRP1Q07954 4544 aaKnown RBP5.01□□□□□ -1.61
THBS3-210ENST00000541576 ADM2Q7Z4H4 148 aa5.01□□□□□ -1.61
THBS3-210ENST00000541576 RETNLBQ9BQ08 111 aa5.01□□□□□ -1.61
THBS3-210ENST00000541576 SPINK1P00995 79 aa5□□□□□ -1.61
THBS3-210ENST00000541576 BIRC6Q9NR09 4857 aa4.99□□□□□ -1.61
THBS3-210ENST00000541576 ASB16-AS1Q495Z4 193 aa4.99□□□□□ -1.61
THBS3-210ENST00000541576 KRTAP29-1A8MX34 341 aaPredicted RBP4.99□□□□□ -1.61
THBS3-210ENST00000541576 A6NN06 94 aa4.98□□□□□ -1.61
THBS3-210ENST00000541576 A8MWP4 228 aa4.98□□□□□ -1.61
THBS3-210ENST00000541576 Q75L30 129 aa4.98□□□□□ -1.61
THBS3-210ENST00000541576 FAT3Q8TDW7 4589 aa4.97□□□□□ -1.61
THBS3-210ENST00000541576 C7orf65Q6ZTY9 151 aa4.97□□□□□ -1.61
THBS3-210ENST00000541576 CDC42SE1Q9NRR8 79 aa4.97□□□□□ -1.61
THBS3-210ENST00000541576 MYCBP2O75592 4640 aa4.97□□□□□ -1.61
THBS3-210ENST00000541576 TNXBP22105 4242 aa4.96□□□□□ -1.62
THBS3-210ENST00000541576 C8orf87E5RJ46 101 aa4.96□□□□□ -1.62
THBS3-210ENST00000541576 RPS29P62273 56 aaKnown RBP4.96□□□□□ -1.62
THBS3-210ENST00000541576 SPANXA2-OT1Q8N9U9 137 aa4.96□□□□□ -1.62
THBS3-210ENST00000541576 KRTAP10-8P60410 259 aa4.95□□□□□ -1.62
THBS3-210ENST00000541576 MMP24-AS1A0A0U1RRL7 71 aa4.94□□□□□ -1.62
THBS3-210ENST00000541576 HRES1P13985 223 aa4.94□□□□□ -1.62
THBS3-210ENST00000541576 LINC00313P59037 77 aa4.94□□□□□ -1.62
THBS3-210ENST00000541576 IGLV7-46A0A075B6I9 117 aa4.94□□□□□ -1.62
THBS3-210ENST00000541576 DMBT1Q9UGM3 2413 aaPredicted RBP4.93□□□□□ -1.62
THBS3-210ENST00000541576 A0A1B0GVX0 72 aa4.93□□□□□ -1.62
THBS3-210ENST00000541576 KRTAP4-5Q9BYR2 181 aa4.92□□□□□ -1.62
THBS3-210ENST00000541576 HERC2O95714 4834 aa4.92□□□□□ -1.62
THBS3-210ENST00000541576 NOTCH2NLQ7Z3S9 236 aa4.92□□□□□ -1.62
THBS3-210ENST00000541576 ABCA13Q86UQ4 5058 aa4.9□□□□□ -1.62
THBS3-210ENST00000541576 H3BPC8 53 aa4.9□□□□□ -1.62
THBS3-210ENST00000541576 C8orf17Q9NRJ1 99 aa4.9□□□□□ -1.63
THBS3-210ENST00000541576 LINC01558Q9Y6Z2 57 aa4.89□□□□□ -1.63
THBS3-210ENST00000541576 MT1HL1P0DM35 61 aa4.88□□□□□ -1.63
THBS3-210ENST00000541576 Q5W150 140 aa4.84□□□□□ -1.63
THBS3-210ENST00000541576 A0A1B0GU69 56 aa4.84□□□□□ -1.63
THBS3-210ENST00000541576 MRPL34Q9BQ48 92 aaKnown RBP4.84□□□□□ -1.63
THBS3-210ENST00000541576 TP53AIP1Q9HCN2 124 aa4.83□□□□□ -1.64
THBS3-210ENST00000541576 LINC01554Q52M75 96 aa4.82□□□□□ -1.64
THBS3-210ENST00000541576 CSAG1Q6PB30 78 aa4.8□□□□□ -1.64
THBS3-210ENST00000541576 KRTAP16-1A8MUX0 517 aa4.8□□□□□ -1.64
THBS3-210ENST00000541576 IGKV2D-30A0A075B6S6 120 aa4.78□□□□□ -1.64
THBS3-210ENST00000541576 C9orf92A6NGG3 77 aa4.78□□□□□ -1.64
THBS3-210ENST00000541576 IGKV2-30P06310 120 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms