RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 PRO0628Q9UI54 55 aa8.89□□□□□ -0.99
VARS2-211ENST00000541562 LCE6AA0A183 80 aa8.88□□□□□ -0.99
VARS2-211ENST00000541562 Q5W150 140 aa8.88□□□□□ -0.99
VARS2-211ENST00000541562 A0A1B0GVX0 72 aa8.87□□□□□ -0.99
VARS2-211ENST00000541562 IGLV7-43P04211 117 aa8.87□□□□□ -0.99
VARS2-211ENST00000541562 COA5Q86WW8 74 aa8.86□□□□□ -0.99
VARS2-211ENST00000541562 Q6ZR54 194 aa8.86□□□□□ -0.99
VARS2-211ENST00000541562 KRTAP10-1P60331 282 aa8.84□□□□□ -0.99
VARS2-211ENST00000541562 Q8N9P0 234 aaPredicted RBP8.84□□□□□ -0.99
VARS2-211ENST00000541562 PRR26Q8N8Z3 221 aa8.84□□□□□ -0.99
VARS2-211ENST00000541562 MRPL34Q9BQ48 92 aaKnown RBP8.83□□□□□ -1
VARS2-211ENST00000541562 ZNF706Q9Y5V0 76 aaPredicted RBP8.83□□□□□ -1
VARS2-211ENST00000541562 PLAC8Q9NZF1 115 aa8.82□□□□□ -1
VARS2-211ENST00000541562 DYNC2H1Q8NCM8 4307 aaKnown RBP8.81□□□□□ -1
VARS2-211ENST00000541562 DNAH5Q8TE73 4624 aa8.79□□□□□ -1
VARS2-211ENST00000541562 PKHD1P08F94 4074 aa8.79□□□□□ -1
VARS2-211ENST00000541562 FAT2Q9NYQ8 4349 aa8.78□□□□□ -1
VARS2-211ENST00000541562 A6NED7 52 aa8.78□□□□□ -1
VARS2-211ENST00000541562 FLG2Q5D862 2391 aaPredicted RBP8.78□□□□□ -1
VARS2-211ENST00000541562 IGKV2D-30A0A075B6S6 120 aa8.77□□□□□ -1
VARS2-211ENST00000541562 IGKV2-30P06310 120 aa8.77□□□□□ -1
VARS2-211ENST00000541562 LINC00483Q53H64 154 aa8.75□□□□□ -1.01
VARS2-211ENST00000541562 C1orf195Q5TG92 126 aa8.75□□□□□ -1.01
VARS2-211ENST00000541562 ALMS1Q8TCU4 4167 aa8.74□□□□□ -1.01
VARS2-211ENST00000541562 CYP4F30PQ9H0H9 118 aa8.74□□□□□ -1.01
VARS2-211ENST00000541562 VPS13BQ7Z7G8 4022 aa8.74□□□□□ -1.01
VARS2-211ENST00000541562 DMBT1Q9UGM3 2413 aaPredicted RBP8.73□□□□□ -1.01
VARS2-211ENST00000541562 SPINK1P00995 79 aa8.73□□□□□ -1.01
VARS2-211ENST00000541562 KRTAP13-2Q52LG2 175 aa8.73□□□□□ -1.01
VARS2-211ENST00000541562 Q5VV11 94 aa8.73□□□□□ -1.01
VARS2-211ENST00000541562 PLA2G1BP04054 148 aaKnown RBP8.72□□□□□ -1.01
VARS2-211ENST00000541562 FAT1Q14517 4588 aa8.71□□□□□ -1.01
VARS2-211ENST00000541562 HRES1P13985 223 aa8.71□□□□□ -1.02
VARS2-211ENST00000541562 Q1T7F1 81 aa8.71□□□□□ -1.02
VARS2-211ENST00000541562 LINC00313P59037 77 aa8.7□□□□□ -1.02
VARS2-211ENST00000541562 PMAIP1Q13794 54 aa8.68□□□□□ -1.02
VARS2-211ENST00000541562 IGLV7-46A0A075B6I9 117 aa8.67□□□□□ -1.02
VARS2-211ENST00000541562 C9orf92A6NGG3 77 aa8.66□□□□□ -1.02
VARS2-211ENST00000541562 TP53AIP1Q9HCN2 124 aa8.66□□□□□ -1.02
VARS2-211ENST00000541562 C4orf48Q5BLP8 95 aa8.66□□□□□ -1.02
VARS2-211ENST00000541562 SPINK7P58062 85 aa8.63□□□□□ -1.03
VARS2-211ENST00000541562 TYMSOSQ8TAI1 123 aa8.62□□□□□ -1.03
VARS2-211ENST00000541562 SPANXA2-OT1Q8N9U9 137 aa8.62□□□□□ -1.03
VARS2-211ENST00000541562 H3BPC8 53 aa8.61□□□□□ -1.03
VARS2-211ENST00000541562 Q8N1X5 172 aa8.61□□□□□ -1.03
VARS2-211ENST00000541562 LCA10Q71F78 164 aa8.6□□□□□ -1.03
VARS2-211ENST00000541562 ASB16-AS1Q495Z4 193 aa8.56□□□□□ -1.04
VARS2-211ENST00000541562 SSBP3-AS1Q7Z2R9 100 aa8.56□□□□□ -1.04
VARS2-211ENST00000541562 LIMD2Q9BT23 127 aa8.56□□□□□ -1.04
VARS2-211ENST00000541562 PKD1P98161 4303 aa8.54□□□□□ -1.04
VARS2-211ENST00000541562 V9GYY9 64 aa8.53□□□□□ -1.04
VARS2-211ENST00000541562 LOC101927531A0A1B0GV80 90 aa8.51□□□□□ -1.05
VARS2-211ENST00000541562 KRTAP1-4P0C5Y4 121 aa8.51□□□□□ -1.05
VARS2-211ENST00000541562 C7orf65Q6ZTY9 151 aa8.5□□□□□ -1.05
VARS2-211ENST00000541562 MYCBP2O75592 4640 aa8.47□□□□□ -1.05
VARS2-211ENST00000541562 ACYP2P14621 99 aa8.46□□□□□ -1.06
VARS2-211ENST00000541562 KMT2CQ8NEZ4 4911 aaKnown RBP8.45□□□□□ -1.06
VARS2-211ENST00000541562 DYNC1H1Q14204 4646 aaKnown RBP8.45□□□□□ -1.06
VARS2-211ENST00000541562 FAM229AH3BQW9 127 aa8.44□□□□□ -1.06
VARS2-211ENST00000541562 SACSQ9NZJ4 4579 aa8.42□□□□□ -1.06
VARS2-211ENST00000541562 KRTAP13-3Q3SY46 172 aa8.42□□□□□ -1.06
VARS2-211ENST00000541562 LRP1Q07954 4544 aaKnown RBP8.41□□□□□ -1.06
VARS2-211ENST00000541562 LINC00304Q8N9R0 145 aa8.41□□□□□ -1.06
VARS2-211ENST00000541562 A0A1B0GU69 56 aa8.4□□□□□ -1.06
VARS2-211ENST00000541562 C8orf87E5RJ46 101 aa8.4□□□□□ -1.06
VARS2-211ENST00000541562 Q6ZSA8 131 aa8.4□□□□□ -1.06
VARS2-211ENST00000541562 Q75L30 129 aa8.4□□□□□ -1.07
VARS2-211ENST00000541562 LINC01558Q9Y6Z2 57 aa8.39□□□□□ -1.07
VARS2-211ENST00000541562 PRAC1Q96KF2 57 aa8.36□□□□□ -1.07
VARS2-211ENST00000541562 KRTAP16-1A8MUX0 517 aa8.36□□□□□ -1.07
VARS2-211ENST00000541562 ADM2Q7Z4H4 148 aa8.34□□□□□ -1.07
VARS2-211ENST00000541562 CDC42SE1Q9NRR8 79 aa8.31□□□□□ -1.08
VARS2-211ENST00000541562 DMAC1Q96GE9 116 aa8.3□□□□□ -1.08
VARS2-211ENST00000541562 APOBP04114 4563 aaKnown RBP8.3□□□□□ -1.08
VARS2-211ENST00000541562 SEC61GP60059 68 aa8.29□□□□□ -1.08
VARS2-211ENST00000541562 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
VARS2-211ENST00000541562 ATP11AUNQ6ZP68 121 aa8.26□□□□□ -1.09
VARS2-211ENST00000541562 MIR22HGQ0VDD5 57 aa8.18□□□□□ -1.1
VARS2-211ENST00000541562 A6NN06 94 aa8.18□□□□□ -1.1
VARS2-211ENST00000541562 KTN1-AS1Q86SY8 53 aa8.17□□□□□ -1.1
VARS2-211ENST00000541562 RBM12B-AS1Q9P1G2 102 aa8.15□□□□□ -1.1
VARS2-211ENST00000541562 KIAA1109Q2LD37 5005 aa8.14□□□□□ -1.11
VARS2-211ENST00000541562 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
VARS2-211ENST00000541562 UQCR11O14957 56 aa8.11□□□□□ -1.11
VARS2-211ENST00000541562 SPATA8Q6RVD6 105 aa8.11□□□□□ -1.11
VARS2-211ENST00000541562 RYR2Q92736 4967 aa8.09□□□□□ -1.11
VARS2-211ENST00000541562 HSPG2P98160 4391 aa8.08□□□□□ -1.12
VARS2-211ENST00000541562 RYR3Q15413 4870 aa8.07□□□□□ -1.12
VARS2-211ENST00000541562 KRTAP3-1Q9BYR8 98 aa8.05□□□□□ -1.12
VARS2-211ENST00000541562 PKHD1L1Q86WI1 4243 aa8.04□□□□□ -1.12
VARS2-211ENST00000541562 A0A1B0GVY2 172 aa8.02□□□□□ -1.13
VARS2-211ENST00000541562 Q5VSD8 79 aa8.02□□□□□ -1.13
VARS2-211ENST00000541562 A0A0D9SG42 100 aa8.01□□□□□ -1.13
VARS2-211ENST00000541562 LPAP08519 4548 aa8□□□□□ -1.13
VARS2-211ENST00000541562 KRTAP10-4P60372 401 aaPredicted RBP7.99□□□□□ -1.13
VARS2-211ENST00000541562 KRTAP17-1Q9BYP8 105 aa7.99□□□□□ -1.13
VARS2-211ENST00000541562 RYR1P21817 5038 aa7.97□□□□□ -1.13
VARS2-211ENST00000541562 CSAG1Q6PB30 78 aa7.95□□□□□ -1.14
VARS2-211ENST00000541562 A8MUU9 505 aa7.92□□□□□ -1.14
VARS2-211ENST00000541562 LRP2P98164 4655 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms